| Previous changeset 0:7cda9aef13f3 (2022-12-13) Next changeset 2:42ec41fe2329 (2023-10-12) |
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Commit message:
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/recetox_msfinder commit 7fc8ad942c34ccd1f80cfc67bfb0254631bac16c |
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modified:
macros.xml recetox_msfinder.xml |
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| diff -r 7cda9aef13f3 -r 29fc1af350f5 macros.xml --- a/macros.xml Tue Dec 13 13:26:29 2022 +0000 +++ b/macros.xml Thu Feb 02 09:19:40 2023 +0000 |
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| @@ -1,8 +1,8 @@ <macros> - <token name="@TOOL_VERSION@">3.5.2</token> + <token name="@TOOL_VERSION@">v3.5.2-rcx0</token> <xml name="requirements"> <requirements> - <container type="docker">recetox/recetox-msfinder:3.5.2-0</container> + <container type="docker">recetox/recetox-msfinder:v3.5.2-rcx0</container> </requirements> </xml> <xml name="creator"> @@ -37,8 +37,7 @@ <param name="LewisAndSeniorCheck" type="boolean" checked="True" truevalue="True" falsevalue="False" label="LewisAndSeniorCheck" help="Generate formula candidates that match the valence rules of formula elements." /> </xml> - <xml name="element_check_parameter"> - <!-- Element Checks --> + <!-- Element Checks <xml name="element_check_parameter"> <param name="Ocheck" type="boolean" checked="True" truevalue="True" falsevalue="False" label="Ocheck" /> <param name="Ncheck" type="boolean" checked="True" truevalue="True" falsevalue="False" label="Ncheck" /> <param name="Pcheck" type="boolean" checked="True" truevalue="True" falsevalue="False" label="Pcheck" /> @@ -48,7 +47,7 @@ <param name="BrCheck" type="boolean" checked="True" truevalue="True" falsevalue="False" label="BrCheck" /> <param name="Icheck" type="boolean" checked="True" truevalue="True" falsevalue="False" label="Icheck" /> <param name="SiCheck" type="boolean" checked="True" truevalue="True" falsevalue="False" label="SiCheck" /> - </xml> + </xml> --> <xml name="output"> <data name="annotated_data" format="msp" /> </xml> |
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| diff -r 7cda9aef13f3 -r 29fc1af350f5 recetox_msfinder.xml --- a/recetox_msfinder.xml Tue Dec 13 13:26:29 2022 +0000 +++ b/recetox_msfinder.xml Thu Feb 02 09:19:40 2023 +0000 |
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| @@ -21,15 +21,6 @@ "Ms1Tolerance=$Ms1Tolerance" \ "MassToleranceType=$MassToleranceType" \ "StructurePredictionTimeOut=$StructurePredictionTimeOut" \ - "Ocheck=$element_selection.Ocheck" \ - "Ncheck=$element_selection.Ncheck" \ - "Pcheck=$element_selection.Pcheck" \ - "Scheck=$element_selection.Scheck" \ - "Fcheck=$element_selection.Fcheck" \ - "ClCheck=$element_selection.ClCheck" \ - "BrCheck=$element_selection.BrCheck" \ - "Icheck=$element_selection.Icheck" \ - "SiCheck=$element_selection.SiCheck" \ "LewisAndSeniorCheck=$LewisAndSeniorCheck" \ "IsUseRtForFilteringCandidates=False" \ "RtToleranceForStructureElucidation=2.5" \ @@ -48,9 +39,9 @@ <inputs> <expand macro="input" /> <expand macro="parameter" /> - <section name="element_selection" title="Element Selection" expanded="true" help="Generate formula candidates that just contain the elements selected by the users."> + <!-- <section name="element_selection" title="Element Selection" expanded="true" help="Generate formula candidates that just contain the elements selected by the users."> <expand macro="element_check_parameter" /> - </section> + </section> --> </inputs> <outputs> |