| Previous changeset 14:cbd8982c9f51 (2016-08-15) Next changeset 16:3233451a3bd6 (2016-09-25) |
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Commit message:
planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit f11032a9df62c79a46f6e4a055a3c7ae981ea721 |
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modified:
Bam.pyc Bed.pyc BedSimpleRepeats.pyc BigWig.pyc Datatype.pyc Gff3.pyc Gtf.pyc Track.pyc TrackDb.pyc TrackHub.pyc hubArchiveCreator.xml util/Fasta.pyc util/Filters.pyc util/__init__.pyc util/subtools.pyc |
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| diff -r cbd8982c9f51 -r 2a45cd656e8e hubArchiveCreator.xml --- a/hubArchiveCreator.xml Mon Aug 15 19:19:32 2016 -0400 +++ b/hubArchiveCreator.xml Fri Sep 02 15:41:51 2016 -0400 |
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| @@ -5,21 +5,22 @@ </description> <requirements> + <!-- Conda dependencies --> + <requirement type="package" version="332">ucsc-bedtobigbed</requirement> + <requirement type="package" version="332">ucsc-fatotwobit</requirement> + <requirement type="package" version="332">ucsc-genepredtobed</requirement> + <requirement type="package" version="332">ucsc-genepredtobiggenepred</requirement> + <requirement type="package" version="332">ucsc-gff3togenepred</requirement> + <requirement type="package" version="332">ucsc-gtftogenepred</requirement> + <requirement type="package" version="332">ucsc-twobitinfo</requirement> + <requirement type="package" version="1.3">samtools</requirement> + <!-- ToolShed dependencies --> <requirement type="package" version="312">ucsc_tools</requirement> <requirement type="package" version="0.0.1">gff3ToGenePred</requirement> <requirement type="package" version="0.0.1">gtfToGenePred</requirement> <requirement type="package" version="0.0.1">genePredToBed</requirement> <requirement type="package" version="0.0.1">genePredToBigGenePred</requirement> <requirement type="package" version="1.2">samtools</requirement> - <!-- Conda dependencies --> - <requirement type="package" version="332">ucsc-bedtobigbed</requirement> - <requirement type="package" version="332">ucsc-fatotwobit</requirement> - <requirement type="package" version="324">ucsc-genepredtobed</requirement> - <requirement type="package" version="332">ucsc-genepredtobiggenepred</requirement> - <requirement type="package" version="324">ucsc-gff3togenepred</requirement> - <requirement type="package" version="324">ucsc-gtftogenepred</requirement> - <requirement type="package" version="324">ucsc-twobitinfo</requirement> - <requirement type="package" version="1.3.1">samtools</requirement> </requirements> <stdio> |
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