| Previous changeset 1:404fae08ea31 (2016-12-21) Next changeset 3:a6ea26c1f225 (2017-04-11) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tools/bwameth commit 10747839851e862ba0200061e1c99d68e009fb18 |
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modified:
bwameth.xml |
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| diff -r 404fae08ea31 -r 2e4674c16615 bwameth.xml --- a/bwameth.xml Wed Dec 21 17:49:54 2016 -0500 +++ b/bwameth.xml Sun Mar 12 04:11:22 2017 -0400 |
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| @@ -31,7 +31,7 @@ #else: $single_or_paired.input_mate1.forward $single_or_paired.input_mate1.reverse #end if - | samtools view -u - | samtools sort -@ "\${GALAXY_SLOTS:-4}" -o output.bam - + | samtools view -u - | samtools sort -@ "\${GALAXY_SLOTS:-4}" -T tmp -O bam -o output.bam - ]]> </command> <inputs> |