Repository 'psltobed'
hg clone https://toolshed.g2.bx.psu.edu/repos/rmarenco/psltobed

Changeset 2:30fd14cf565c (2016-07-14)
Previous changeset 1:868dc60b1260 (2016-07-14) Next changeset 3:e4bed427031f (2016-08-22)
Commit message:
planemo upload commit 8de7919b3e0f263547db7846baaa1c9e092ba00c-dirty
modified:
pslToBed.xml
added:
tool_dependencies.xml
b
diff -r 868dc60b1260 -r 30fd14cf565c pslToBed.xml
--- a/pslToBed.xml Thu Jul 14 17:59:44 2016 -0400
+++ b/pslToBed.xml Thu Jul 14 18:03:58 2016 -0400
b
@@ -1,6 +1,6 @@
 <tool id="pslToBed" name="pslToBed" version="0.1.0">
     <requirements>
-        <requirement type="package" version="324">ucsc-psltobed</requirement>
+        <requirement type="package" version="1.0">pslToBed</requirement>
     </requirements>
     <stdio>
         <exit_code range="1:" />
b
diff -r 868dc60b1260 -r 30fd14cf565c tool_dependencies.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml Thu Jul 14 18:03:58 2016 -0400
b
@@ -0,0 +1,21 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <!-- Package blastXmlToPsl -->
+    <package name="pslToBed" version="1.0">
+        <install version="1.0">
+            <actions>
+                <action type="download_binary" target_directory="bin">
+                    <url_template os="darwin">http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/pslToBed</url_template>
+                    <url_template os="linux">http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/pslToBed</url_template>
+                </action>
+                <action type="chmod">
+                    <file mode="750">$INSTALL_DIR/bin/pslToBed</file>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>The tools downloaded by this dependency definition are free for academic use.</readme>
+    </package>
+</tool_dependency>
\ No newline at end of file