| Previous changeset 11:f506df85c652 (2022-07-23) Next changeset 13:37757ffb4c5f (2022-09-20) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 407e1d8f4dd1a60623783331926098f7f5624841 |
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modified:
bcftools_mpileup.xml |
| b |
| diff -r f506df85c652 -r 31ea13dfe5e6 bcftools_mpileup.xml --- a/bcftools_mpileup.xml Sat Jul 23 13:40:56 2022 +0000 +++ b/bcftools_mpileup.xml Fri Aug 19 19:51:22 2022 +0000 |
| b |
| @@ -1,5 +1,5 @@ <?xml version='1.0' encoding='utf-8'?> -<tool name="bcftools @EXECUTABLE@" id="bcftools_@EXECUTABLE@" version="@TOOL_VERSION@+galaxy1"> +<tool name="bcftools @EXECUTABLE@" id="bcftools_@EXECUTABLE@" version="@TOOL_VERSION@+galaxy2"> <description>Generate VCF or BCF containing genotype likelihoods for one or multiple alignment (BAM or CRAM) files</description> <macros> <token name="@EXECUTABLE@">mpileup</token> @@ -108,6 +108,7 @@ #end if #end if -d "${section.max_reads_per_bam}" +$section.ignore_overlaps ${section.skip_anomalous_read_pairs} #if str( $section.quality.quality_settings ) == "adjust": $section.quality.baq |