| Previous changeset 2:dd0cd2319ae5 (2021-11-19) Next changeset 4:2e92e1929cb1 (2022-06-09) |
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Commit message:
"planemo upload for repository https://github.com/ogotoh/spaln commit cb502aebea8ea9ba332768864b8b6daf933e4da8" |
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modified:
macros.xml spaln.xml test-data/output1.tabular test-data/output2.tabular |
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| diff -r dd0cd2319ae5 -r 32c11a4b5dbf macros.xml --- a/macros.xml Fri Nov 19 10:09:15 2021 +0000 +++ b/macros.xml Wed Feb 02 14:15:38 2022 +0000 |
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| @@ -1,3 +1,3 @@ <macros> - <token name="@TOOL_VERSION@">2.4.6</token> + <token name="@TOOL_VERSION@">2.4.7</token> </macros> \ No newline at end of file |
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| diff -r dd0cd2319ae5 -r 32c11a4b5dbf spaln.xml --- a/spaln.xml Fri Nov 19 10:09:15 2021 +0000 +++ b/spaln.xml Wed Feb 02 14:15:38 2022 +0000 |
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| @@ -180,7 +180,7 @@ close (in terms of taxonomic distance) to your species of interest. Use of this setting is recommended. - .. _Spaln: http://www.genome.ist.i.kyoto-u.ac.jp/~aln_user/spaln/ + .. _Spaln: https://github.com/ogotoh/spaln ]]></help> <citations> <citation type="doi">0.1093/nar/gkn105</citation> |
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| diff -r dd0cd2319ae5 -r 32c11a4b5dbf test-data/output1.tabular --- a/test-data/output1.tabular Fri Nov 19 10:09:15 2021 +0000 +++ b/test-data/output1.tabular Wed Feb 02 14:15:38 2022 +0000 |
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| @@ -15,4 +15,4 @@ NP_001121846.1 scaffold_1 37.50 24 5 0 198 205 10045 10068 2.8 56 0.4 0.77 0.51 0 0 0 0 GT.AG NP_001121846.1 scaffold_1 25.00 24 6 0 206 213 10229 10252 3.8 160 -0.7 1.30 1.25 0 0 0 0 GT.AG NP_001121846.1 scaffold_1 20.00 24 6 1 214 222 10395 10418 4.6 142 0.0 1.24 3.54 0 0 0 0 GT.AG -@ scaffold_1 + ( 17 10418 ) NP_001121846.1 [1:222] ( 1 222 ) S: 420.1 =: 36.5 C: 97.3 T#: 135 T-: 8 B#: 0 B-: 0 X: 0 Nexn: 16 HC: 0.0 +@ scaffold_1 + ( 17 10418 ) NP_001121846.1 [1:222] ( 1 222 ) S: 420.1 =: 36.5 C: 97.3 T#: 135 T-: 8 B#: 0 B-: 0 X: 0 Nexn: 16 HC: 6.8 |
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| diff -r dd0cd2319ae5 -r 32c11a4b5dbf test-data/output2.tabular --- a/test-data/output2.tabular Fri Nov 19 10:09:15 2021 +0000 +++ b/test-data/output2.tabular Wed Feb 02 14:15:38 2022 +0000 |
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| @@ -4,4 +4,4 @@ NP_001121846.1 scaffold_1 64.29 127 15 0 69 110 7124 7250 18.9 6584 -3.1 1.77 1.71 0 0 0 0 GT.AG NP_001121846.1 scaffold_1 24.49 147 30 7 111 152 44187 44333 3.0 36936 -4.2 1.03 1.02 0 0 0 1 GT.AG NP_001121846.1 scaffold_1 18.75 221 52 10 153 222 44595 44815 4.8 261 -1.6 1.50 3.36 0 0 0 1 GT.AG -@ scaffold_1 + ( 17 44815 ) NP_001121846.1 [1:222] ( 1 222 ) S: 324.7 =: 37.8 C: 98.6 T#: 135 T-: 20 B#: 0 B-: 0 X: 0 Nexn: 5 HC: 0.0 +@ scaffold_1 + ( 17 44815 ) NP_001121846.1 [1:222] ( 1 222 ) S: 324.7 =: 37.8 C: 98.6 T#: 135 T-: 20 B#: 0 B-: 0 X: 0 Nexn: 5 HC: 6.8 |