| Previous changeset 1:dbcc6d233eed (2018-01-10) Next changeset 3:4df890ffed44 (2018-01-11) |
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Commit message:
Changed to only use one fastq when paired is selected - otherwise need to make workflow to handle concatenation |
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modified:
ectyper.xml |
| b |
| diff -r dbcc6d233eed -r 338b07ddaa10 ectyper.xml --- a/ectyper.xml Wed Jan 10 14:22:47 2018 -0500 +++ b/ectyper.xml Wed Jan 10 16:12:13 2018 -0500 |
| b |
| @@ -18,7 +18,7 @@ #else if $jobtype.select == "se" -i sample_1.fastq #else if $jobtype.select == "pe" - -i sample_1.fastq sample_2.fastq + -i sample_1.fastq #end if -d $percent_identity -l $percent_length @@ -30,7 +30,7 @@ <param name="select" type="select" label="Assembly or FASTQ Reads?"> <option value="asm">Genome Assembly</option> <option value="se">Single-End Reads</option> - <option value="pe">Paired-End Reads</option> + <option value="pe">Paired-End Reads (only first fastq will be used)</option> </param> <when value="asm"> <param name="draft" type="data" format="fasta" label="FASTA" /> |