Repository 'prims_proteomics'
hg clone https://toolshed.g2.bx.psu.edu/repos/pieterlukasse/prims_proteomics

Changeset 27:34c4e7e0f23b (2015-01-30)
Previous changeset 26:17acaf080e76 (2015-01-30) Next changeset 28:6107b74eeb11 (2015-01-30)
Commit message:
type fix
modified:
napq.xml
b
diff -r 17acaf080e76 -r 34c4e7e0f23b napq.xml
--- a/napq.xml Fri Jan 30 14:32:06 2015 +0100
+++ b/napq.xml Fri Jan 30 14:37:28 2015 +0100
b
@@ -84,7 +84,16 @@
  </inputs>
  <configfiles>
  <configfile name="identificationsConfigFile">## start comment
- apml
+ ## iterate over the selected files and store their names in the config file
+ #for $i, $s in enumerate( $identificationFileList )
+ ${s.identificationsFile}
+ ## also print out the datatype in the next line, based on previously configured datatype
+ #if isinstance( $s.identificationsFile.datatype, $__app__.datatypes_registry.get_datatype_by_extension('apml').__class__):
+ apml
+ #else:
+         mzid
+       #end if
+ #end for
  ## end comment</configfile>
  </configfiles>
  <outputs>