| Previous changeset 0:77de5fc623f9 (2015-05-27) Next changeset 2:2974c382105c (2018-12-22) |
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Commit message:
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mismatch_frequencies commit 0beb86e6a562c0dad52afdc0f047b3887ad9ce8e-dirty |
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modified:
mismatch_frequencies.xml tool_dependencies.xml |
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| diff -r 77de5fc623f9 -r 3613460e891e mismatch_frequencies.xml --- a/mismatch_frequencies.xml Wed May 27 13:40:23 2015 -0400 +++ b/mismatch_frequencies.xml Wed Mar 23 09:59:33 2016 -0400 |
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| @@ -1,4 +1,4 @@ -<tool id="mismatch_frequencies" name="Mismatch Frequencies" version="0.0.9" hidden="false" > +<tool id="mismatch_frequencies" name="Mismatch Frequencies" version="0.1.0" hidden="false" > <description>Analyze mismatch frequencies in BAM/SAM alignments</description> <requirements> <requirement type="package" version="0.7.7">pysam</requirement> @@ -11,7 +11,7 @@ #end for --name #for i in $rep - "$i.input_file.name" + "$i.input_file.element_identifier" #end for --output_pdf $output_pdf --output_tab $output_tab --min $min_length --max $max_length --n_mm $number_of_mismatches |
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| diff -r 77de5fc623f9 -r 3613460e891e tool_dependencies.xml --- a/tool_dependencies.xml Wed May 27 13:40:23 2015 -0400 +++ b/tool_dependencies.xml Wed Mar 23 09:59:33 2016 -0400 |
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| @@ -1,12 +1,12 @@ <?xml version="1.0"?> <tool_dependency> <package name="pysam" version="0.7.7"> - <repository changeset_revision="b62538c8c664" name="package_pysam_0_7_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="0a5141bdf9d0" name="package_pysam_0_7_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="pandas" version="0.14.1"> - <repository changeset_revision="18e65cea168d" name="package_pandas_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="ac9f317487a9" name="package_pandas_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="matplotlib" version="1.2.1"> - <repository changeset_revision="a03ee94316b5" name="package_matplotlib_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="48020985e28c" name="package_matplotlib_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> </tool_dependency> |