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Commit message:
planemo upload commit d630dda5f5480884c7b4f349704e8f68a6f726aa |
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added:
tool_dependencies.xml |
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| diff -r 000000000000 -r 39d26518c84b tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Mon Jun 25 14:54:19 2018 -0400 |
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| @@ -0,0 +1,56 @@ +<?xml version="1.0" ?> +<tool_dependency> + <package name="ucsc_rename_bigwig" version="340"> + <install version="1.0"> + <actions_group> + <actions os="darwin" architecture="x86_64"> + <action type="download_by_url" + sha256sum="f7d88e5a4d4a99f1489ae64ea35031593f10b80d58efbac7f29e372dbc827f45"> + http://old-gep.wustl.edu/~galaxy/packages/ucsc_rename_bigwig_340_macOS_x86_64.tar.gz + </action> + <action type="move_directory_files"> + <source_directory>bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + + <actions os="linux" architecture="x86_64"> + <action type="download_by_url" + sha256sum="cadb724cbfebda2ec3a43519f7cb5eec97842ba6f271f6ad78af580bc3f9cd9a"> + http://old-gep.wustl.edu/~galaxy/packages/ucsc_rename_bigwig_340_linux_x86_64.tar.gz + </action> + <action type="move_directory_files"> + <source_directory>bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + + <!-- Display error message for unsupported OS and CPU architecture --> + <actions> + <action type="shell_command"> + echo "ERROR: This package only supports 64-bit systems running macOS or Linux" + </action> + <action type="shell_command">false</action> + </actions> + + <!-- update $PATH environment variable --> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + </actions_group> + </install> + <readme> + <![CDATA[ + This package contains the utilities for renaming bigWig files + `bigWig files <https://genome.ucsc.edu/goldenpath/help/bigWig.html>`_. + The utilities were created by the + `Genome Bioinformatics Group <https://genome.ucsc.edu/staff.html>`_ + at the UCSC Genomics Institute. + + The bigWig file format is designed to store dense continuous datasets + and it is compatible with many genome browsers (e.g., UCSC Genome Browser, + JBrowse, IGV). + ]]> + </readme> + </package> +</tool_dependency> |