| Previous changeset 4:261464223fa3 (2022-09-06) Next changeset 6:e11d5fafd0cc (2024-07-02) |
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Commit message:
planemo upload for repository https://github.com/goeckslab/tools-mti commit 0762a583dd9d7333f9b039bc06003caaff0f2103 |
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modified:
macros.xml quantification.xml |
| b |
| diff -r 261464223fa3 -r 3a916c4e9f5f macros.xml --- a/macros.xml Tue Sep 06 23:18:12 2022 +0000 +++ b/macros.xml Wed Dec 28 21:19:44 2022 +0000 |
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| @@ -22,8 +22,8 @@ </citations> </xml> - <token name="@TOOL_VERSION@">1.5.1</token> - <token name="@VERSION_SUFFIX@">0</token> + <token name="@TOOL_VERSION@">1.5.3</token> + <token name="@VERSION_SUFFIX@">1</token> <token name="@CMD_BEGIN@"><![CDATA[ QUANT_PATH='' && if [ -f '/app/CommandSingleCellExtraction.py' ]; then |
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| diff -r 261464223fa3 -r 3a916c4e9f5f quantification.xml --- a/quantification.xml Tue Sep 06 23:18:12 2022 +0000 +++ b/quantification.xml Wed Dec 28 21:19:44 2022 +0000 |
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| @@ -6,7 +6,7 @@ <expand macro="requirements"/> <expand macro="version_cmd"/> - <command detect_errors="exit_code"><![CDATA[ + <command detect_errors="aggressive"><![CDATA[ ln -s '$image' 'input.ome.tiff' && ln -s '$primary_mask' 'primary_mask.tiff' && #if $supp_mask @@ -64,12 +64,12 @@ <param name="channel_names" value="channels.csv" /> <output name="cellmask" ftype="csv"> <assert_contents> - <has_n_columns n="11" sep="," delta="1" /> + <has_n_lines n="264" delta="1" /> </assert_contents> </output> <output name="suppmask" ftype="csv"> <assert_contents> - <has_n_columns n="11" sep="," delta="1" /> + <has_n_lines n="264" delta="1" /> </assert_contents> </output> </test> |