Repository 'metaspades'
hg clone https://toolshed.g2.bx.psu.edu/repos/nml/metaspades

Changeset 5:3ca2d2a9068c (2021-09-16)
Previous changeset 4:ce02f513e598 (2021-03-19) Next changeset 6:a9b8c9e204ee (2022-01-23)
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaspades commit a66345b894a128f7cb44876cc9a51f48c5213d95"
modified:
metaspades.xml
b
diff -r ce02f513e598 -r 3ca2d2a9068c metaspades.xml
--- a/metaspades.xml Fri Mar 19 21:38:05 2021 +0000
+++ b/metaspades.xml Thu Sep 16 15:25:29 2021 +0000
[
@@ -1,5 +1,8 @@
 <tool id="metaspades" name="metaSPAdes" version="3.9.0.1">
     <description>assembler for metagenomics datasets</description>
+    <xrefs>
+        <xref type="bio.tools">metaspades</xref>
+    </xrefs>
     <requirements>
         <requirement type="package" version="3.9.0">spades</requirement>
     </requirements>
@@ -9,7 +12,7 @@
     <command>
     <![CDATA[
 
-    if [[ -n \$GALAXY_MEMORY_MB ]]; then
+    if [ -n "\$GALAXY_MEMORY_MB" ]; then
         GALAXY_MEMORY_GB=\$(( GALAXY_MEMORY_MB / 1024 ));
     fi &&