Repository 'geo_data'
hg clone https://toolshed.g2.bx.psu.edu/repos/testtool/geo_data

Changeset 28:3d281ad15b83 (2017-04-13)
Previous changeset 27:2d4a97506931 (2017-04-13) Next changeset 29:118e636a5f95 (2017-04-13)
Commit message:
Uploaded
modified:
GRsetFromGEO/GRsetFromGEO.R
GRsetFromGEO/GRsetFromGEO.xml
b
diff -r 2d4a97506931 -r 3d281ad15b83 GRsetFromGEO/GRsetFromGEO.R
--- a/GRsetFromGEO/GRsetFromGEO.R Thu Apr 13 11:01:46 2017 -0400
+++ b/GRsetFromGEO/GRsetFromGEO.R Thu Apr 13 11:26:43 2017 -0400
[
@@ -8,5 +8,7 @@
 output = args[2] 
 
 GRset <- getGenomicRatioSetFromGEO(GSE)
+a<-"stefan"
+write.table(a,output)
 
-save(GRset,file = output)
+#save(GRset,file = output)
b
diff -r 2d4a97506931 -r 3d281ad15b83 GRsetFromGEO/GRsetFromGEO.xml
--- a/GRsetFromGEO/GRsetFromGEO.xml Thu Apr 13 11:01:46 2017 -0400
+++ b/GRsetFromGEO/GRsetFromGEO.xml Thu Apr 13 11:26:43 2017 -0400
b
@@ -13,7 +13,7 @@
      <param name="GSE" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/>
   </inputs>
   <outputs>
-   <data format="RData" name="output" label="GenomicRatioSet.RData"/>
+   <data format="txt" name="output" label="GenomicRatioSet.txt"/>
   </outputs>
   <tests>
     <test>
@@ -24,7 +24,7 @@
           </collection>
         </element>
         </param>
-        <output format="RData" name="output" label="test-data/GenomicRatioSet.RData"/>
+        <output format="txt" name="output" label="test-data/GenomicRatioSet.txt"/>
         </test>
     </tests>
   <help>