| Previous changeset 9:9264ac799feb (2023-12-01) |
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Commit message:
planemo upload commit e14699677f337fd1324aa6898c1388796c5446c1-dirty |
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modified:
gff3_extract_sequence.xml |
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added:
__pycache__/gff3.cpython-311.pyc requirements.txt |
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| diff -r 9264ac799feb -r 3d9f283ff09d __pycache__/gff3.cpython-311.pyc |
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| Binary file __pycache__/gff3.cpython-311.pyc has changed |
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| diff -r 9264ac799feb -r 3d9f283ff09d gff3_extract_sequence.xml --- a/gff3_extract_sequence.xml Fri Dec 01 04:26:28 2023 +0000 +++ b/gff3_extract_sequence.xml Fri Dec 01 05:01:01 2023 +0000 |
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| @@ -5,18 +5,22 @@ </macros> <expand macro="requirements"/> <command detect_errors="aggressive"><![CDATA[ -@GENOME_SELECTOR_PRE@ + @GENOME_SELECTOR_PRE@ + + '$__tool_directory__/gff3_extract_sequence.py' -'$__tool_directory__/gff3_extract_sequence.py' -@GENOME_SELECTOR@ + @GENOME_SELECTOR@ + + @INPUT_GFF@ -@INPUT_GFF@ - -#if $feature_filter and $feature_filter is not None: ---feature_filter '$feature_filter' -#end if -'$nodesc' -> '$default']]></command> + #if $feature_filter and $feature_filter is not None: + --feature_filter $feature_filter + #end if + #if $nodesc + --nodesc + #end if + > '$default']]> + </command> <inputs> <expand macro="genome_selector"/> <expand macro="gff3_input"/> |
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| diff -r 9264ac799feb -r 3d9f283ff09d requirements.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/requirements.txt Fri Dec 01 05:01:01 2023 +0000 |
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| @@ -0,0 +1,2 @@ +biopython==1.81 +cpt_gffparser==1.2.2 \ No newline at end of file |