Repository 'minimap2'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/minimap2

Changeset 6:3f4d6399997b (2019-05-06)
Previous changeset 5:17e61517c166 (2018-08-31) Next changeset 7:b3eab4b67562 (2019-10-11)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/minimap2 commit 0eca6ecb53be7fb0050b6671d0efe03d79247229
modified:
minimap2.xml
test-data/mini_reads.paf
b
diff -r 17e61517c166 -r 3f4d6399997b minimap2.xml
--- a/minimap2.xml Fri Aug 31 07:44:15 2018 -0400
+++ b/minimap2.xml Mon May 06 09:34:30 2019 -0400
b
@@ -2,7 +2,7 @@
 <tool id="minimap2" name="Map with minimap2" version="@TOOL_VERSION@" profile="17.01">
     <description>A fast pairwise aligner for genomic and spliced nucleotide sequences</description>
     <macros>
-        <token name="@TOOL_VERSION@">2.12</token>
+        <token name="@TOOL_VERSION@">2.17</token>
     </macros>
     <requirements>
         <requirement type="package" version="@TOOL_VERSION@">minimap2</requirement>
b
diff -r 17e61517c166 -r 3f4d6399997b test-data/mini_reads.paf
--- a/test-data/mini_reads.paf Fri Aug 31 07:44:15 2018 -0400
+++ b/test-data/mini_reads.paf Mon May 06 09:34:30 2019 -0400
b
@@ -1,2 +1,2 @@
-m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1263/0_8655 8655 755 8475 + m140213_230323_42129_c100520410120000001823082509281362_s1_X0/817/0_20440 20440 5798 13009 395 7727 0 tp:A:S cm:i:43 s1:i:294 dv:f:0.2746
-m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1447/0_15191 15191 12916 14825 - m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1447/15237_17783 2546 347 2303 152 1985 0 tp:A:S cm:i:15 s1:i:133 dv:f:0.2503
+m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1263/0_8655 8655 755 8475 + m140213_230323_42129_c100520410120000001823082509281362_s1_X0/817/0_20440 20440 5798 13009 395 7727 0 tp:A:S cm:i:43 s1:i:294 dv:f:0.2746 rl:i:0
+m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1447/0_15191 15191 12916 14825 - m140213_230323_42129_c100520410120000001823082509281362_s1_X0/1447/15237_17783 2546 347 2303 152 1985 0 tp:A:S cm:i:15 s1:i:133 dv:f:0.2503 rl:i:0