Repository 'ncbi_sra_toolkit'
hg clone https://toolshed.g2.bx.psu.edu/repos/matt-shirley/ncbi_sra_toolkit

Changeset 22:4102c1600aa0 (2015-03-30)
Previous changeset 21:847db227d9ce (2015-03-30) Next changeset 23:b94593ba997b (2015-03-30)
Commit message:
blargh
modified:
tool_dependencies.xml
b
diff -r 847db227d9ce -r 4102c1600aa0 tool_dependencies.xml
--- a/tool_dependencies.xml Mon Mar 30 21:11:03 2015 -0400
+++ b/tool_dependencies.xml Mon Mar 30 21:13:09 2015 -0400
b
@@ -11,7 +11,7 @@
             git clone https://github.com/mdshw5/ncbi-vdb.git
             git clone https://github.com/mdshw5/ngs.git
             LD_LIBRARY_PATH=LD_LIBRARY_PATH:$INSTALL_DIR/lib64:$INSTALL_DIR/lib
-            cd $INSTALL_DIR/ncbi-vdb
+            cd $INSTALL_DIR/src/ncbi-vdb
             ./configure --prefix=$INSTALL_DIR --build-prefix=$INSTALL_DIR/build
             make -j2
             make install
@@ -19,7 +19,7 @@
             ./configure --prefix=$INSTALL_DIR --build-prefix=$INSTALL_DIR/build
             make -j2
             make install
-            cd $INSTALL_DIR/sra-tools
+            cd $INSTALL_DIR/src/sra-tools
             ./configure --prefix=$INSTALL_DIR --build-prefix=$INSTALL_DIR/build --with-ncbi-vdb-build=$INSTALL_DIR/build --with-ncbi-vdb-sources=$INSTALL_DIR/src/ncbi-vdb --with-ngs-sdk-prefix=$INSTALL_DIR
             make -j2
             make install