| Previous changeset 5:604c98e58034 (2012-02-14) Next changeset 7:4fc118372ae7 (2012-02-19) |
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modified:
dist/java-genomics-toolkit.jar galaxy-conf/BaseAlignCounts.xml lib/java-genomics-io.jar |
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| diff -r 604c98e58034 -r 422ac2bbb274 dist/java-genomics-toolkit.jar |
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| Binary file dist/java-genomics-toolkit.jar has changed |
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| diff -r 604c98e58034 -r 422ac2bbb274 galaxy-conf/BaseAlignCounts.xml --- a/galaxy-conf/BaseAlignCounts.xml Tue Feb 14 13:04:54 2012 -0500 +++ b/galaxy-conf/BaseAlignCounts.xml Tue Feb 14 18:40:50 2012 -0500 |
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| @@ -2,7 +2,7 @@ <description>of sequencing reads</description> <command interpreter="sh">galaxyToolRunner.sh ngs.BaseAlignCounts -i $input -a ${chromInfo} -x $X -o $output</command> <inputs> - <param name="input" type="data" format="bam,sam,bed,bedgraph" label="Sequencing reads" /> + <param name="input" type="data" format="bam" label="Sequencing reads" /> <param name="X" type="integer" value="0" label="In silico extension (leave 0 for read length)" /> </inputs> <outputs> @@ -12,6 +12,6 @@ <help> .. class:: warningmark - This tool requires sequencing reads in SAM/BAM/Bed/BedGraph format. + This tool requires sequencing reads in BAM format. </help> </tool> |
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| diff -r 604c98e58034 -r 422ac2bbb274 lib/java-genomics-io.jar |
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| Binary file lib/java-genomics-io.jar has changed |