Repository 'qiime2__phylogeny__filter_tree'
hg clone https://toolshed.g2.bx.psu.edu/repos/q2d2/qiime2__phylogeny__filter_tree

Changeset 7:42b0db809909 (2025-07-15)
Previous changeset 6:818d20c622ed (2025-05-05) Next changeset 8:5f4032d783ff (2025-11-01)
Commit message:
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__phylogeny commit 9436cc47c72b58a6a3d3a5c2ee075689c2926ef0
modified:
qiime2__phylogeny__filter_tree.xml
test-data/align_to_tree_mafft_fasttree.test0.rep-seqs.qza
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diff -r 818d20c622ed -r 42b0db809909 qiime2__phylogeny__filter_tree.xml
--- a/qiime2__phylogeny__filter_tree.xml Mon May 05 18:57:14 2025 +0000
+++ b/qiime2__phylogeny__filter_tree.xml Tue Jul 15 22:02:52 2025 +0000
[
@@ -6,17 +6,17 @@
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2025.4.0)
+    q2galaxy (version: 2025.7.0)
 for:
-    qiime2 (version: 2025.4.0)
+    qiime2 (version: 2025.7.0)
 -->
-<tool name="qiime2 phylogeny filter-tree" id="qiime2__phylogeny__filter_tree" version="2025.4.0+q2galaxy.2025.4.0" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 phylogeny filter-tree" id="qiime2__phylogeny__filter_tree" version="2025.7.0+q2galaxy.2025.7.0" profile="22.05" license="BSD-3-Clause">
     <description>Remove features from tree based on metadata</description>
     <xrefs>
         <xref type="bio.tools">qiime2</xref>
     </xrefs>
     <requirements>
-        <container type="docker">quay.io/qiime2/amplicon:2025.4</container>
+        <container type="docker">quay.io/qiime2/amplicon:2025.7</container>
     </requirements>
     <version_command>q2galaxy version phylogeny</version_command>
     <command detect_errors="exit_code">q2galaxy run phylogeny filter_tree '$inputs'</command>
@@ -36,8 +36,8 @@
                 <options options_filter_attribute="metadata.semantic_type">
                     <filter type="add_value" value="FeatureTable[Composition]"/>
                     <filter type="add_value" value="FeatureTable[RelativeFrequency]"/>
+                    <filter type="add_value" value="FeatureTable[Frequency]"/>
                     <filter type="add_value" value="FeatureTable[PresenceAbsence]"/>
-                    <filter type="add_value" value="FeatureTable[Frequency]"/>
                 </options>
                 <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Composition]', 'FeatureTable[Frequency]', 'FeatureTable[PresenceAbsence]', 'FeatureTable[RelativeFrequency]']</validator>
             </param>
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diff -r 818d20c622ed -r 42b0db809909 test-data/align_to_tree_mafft_fasttree.test0.rep-seqs.qza
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Binary file test-data/align_to_tree_mafft_fasttree.test0.rep-seqs.qza has changed