| Previous changeset 1:ce0da6c9f49e (2019-10-29) Next changeset 3:35e00077ba61 (2024-07-11) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qualimap commit 3c0443b29b1fac5ec193912b0c03a79d75ba731a" |
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modified:
qualimap_macros.xml test-data/rnaseq_qc_results_custom.txt test-data/rnaseq_qc_results_default.txt |
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| diff -r ce0da6c9f49e -r 43a1c3e1a4d0 qualimap_macros.xml --- a/qualimap_macros.xml Tue Oct 29 09:14:03 2019 -0400 +++ b/qualimap_macros.xml Mon Jan 13 13:04:14 2020 -0500 |
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| @@ -1,5 +1,5 @@ <macros> - <token name="@VERSION@">2.2.2c</token> + <token name="@VERSION@">2.2.2d</token> <xml name="requirements"> <requirements> |
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| diff -r ce0da6c9f49e -r 43a1c3e1a4d0 test-data/rnaseq_qc_results_custom.txt --- a/test-data/rnaseq_qc_results_custom.txt Tue Oct 29 09:14:03 2019 -0400 +++ b/test-data/rnaseq_qc_results_custom.txt Mon Jan 13 13:04:14 2020 -0500 |
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| @@ -3,10 +3,12 @@ >>>>>>> Input - bam file = /tmp/tmp_CFvEQ/files/000/dataset_49.dat - gff file = /tmp/tmp_CFvEQ/files/000/dataset_2.dat + bam file = /private/var/folders/df/6xqpqpcd7h73b6jpx9t6cwhw0000gn/T/tmptyfj3_ok/files/a/c/2/dataset_ac26f0bf-aca4-4645-9270-5f74e2f0dffb.dat + gff file = features.gtf counting algorithm = proportional protocol = strand-specific-forward + 5'-3' bias region size = 100 + 5'-3' bias number of top transcripts = 1000 >>>>>>> Reads alignment |
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| diff -r ce0da6c9f49e -r 43a1c3e1a4d0 test-data/rnaseq_qc_results_default.txt --- a/test-data/rnaseq_qc_results_default.txt Tue Oct 29 09:14:03 2019 -0400 +++ b/test-data/rnaseq_qc_results_default.txt Mon Jan 13 13:04:14 2020 -0500 |
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| @@ -3,10 +3,12 @@ >>>>>>> Input - bam file = /tmp/tmp_CFvEQ/files/000/dataset_1.dat - gff file = /tmp/tmp_CFvEQ/files/000/dataset_2.dat + bam file = /private/var/folders/df/6xqpqpcd7h73b6jpx9t6cwhw0000gn/T/tmp7dpdo71_/files/7/7/6/dataset_776481e3-00ec-47dd-8143-2213c9f06699.dat + gff file = features.gtf counting algorithm = uniquely-mapped-reads protocol = non-strand-specific + 5'-3' bias region size = 100 + 5'-3' bias number of top transcripts = 1000 >>>>>>> Reads alignment |