| Previous changeset 13:1aee697ec0fc (2024-08-19) |
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Commit message:
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/batched_lastz commit 646cb397d5219aba8b2eb365bef61195789e1d81 |
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modified:
batched_lastz.xml macros.xml |
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| diff -r 1aee697ec0fc -r 43e72105f473 batched_lastz.xml --- a/batched_lastz.xml Mon Aug 19 19:42:23 2024 +0000 +++ b/batched_lastz.xml Fri Aug 30 15:32:44 2024 +0000 |
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| @@ -26,17 +26,17 @@ </test> </tests> <help><![CDATA[ -Batched LASTZ is a special version of LASTZ designed to process output of Galaxy's SegAlign tool. It outputs pairiwse alignments in a verietry of formats. +Batched LASTZ is a special version of LASTZ designed to process output of Galaxy's KegAlign tool. It outputs pairiwse alignments in a verietry of formats. **Using this tool** .. class:: warningmark -This tool is the second part of a two-step process for generation of paiwrise alignments. The output of this tool is alignments in a format that was specified in **Output Options** section of SegAlign tool. +This tool is the second part of a two-step process for generation of paiwrise alignments. The output of this tool is alignments in a format that was specified in **Output Options** section of KegAlign tool. **What it does** -SegAlign processes **Target** and **Query** sequences to identify highly similar regions where gapped extension will be performed to create actual alignments. The actual alignments are generated by **Batched LASTZ** that should be run on the output of this tool. +KegAlign processes **Target** and **Query** sequences to identify highly similar regions where gapped extension will be performed to create actual alignments. The actual alignments are generated by **Batched LASTZ** that should be run on the output of this tool. The default output is a MAF alignment file. Other formats can be configured in *Output Options* section. See LASTZ manual <https://lastz.github.io/lastz/#formats>`_ for description of possible formats. ]]></help> |
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| diff -r 1aee697ec0fc -r 43e72105f473 macros.xml --- a/macros.xml Mon Aug 19 19:42:23 2024 +0000 +++ b/macros.xml Fri Aug 30 15:32:44 2024 +0000 |
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| @@ -6,7 +6,7 @@ </requirements> </xml> <token name="@TOOL_VERSION@">1.04.22</token> - <token name="@VERSION_SUFFIX@">3</token> + <token name="@VERSION_SUFFIX@">4</token> <token name="@PROFILE@">21.05</token> <xml name="citations"> <citations> |