Repository 'trinitystats'
hg clone https://toolshed.g2.bx.psu.edu/repos/anmoljh/trinitystats

Changeset 0:45e1df92fcda (2015-07-09)
Next changeset 1:d6df915e5f26 (2015-07-09)
Commit message:
Uploaded
added:
trinityStats.xml
b
diff -r 000000000000 -r 45e1df92fcda trinityStats.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/trinityStats.xml Thu Jul 09 11:19:45 2015 -0400
b
@@ -0,0 +1,22 @@
+<tool id='id_trinity_stats' name='Trinity Stats' version='1.0'>
+    <description></description>
+
+    <requirements>
+        <requirement type="package" version="2013_08_14">trinityrnaseq</requirement>
+    </requirements>
+
+    <command interpreter='perl'>TrinityStats.pl  $fastafile  &gt; $statsfile 2&gt;&amp;1;</command>
+
+    <inputs>
+     <!-- Required -->
+
+     <param name='fastafile'  type="data" format="fasta"  label='fastafile' help='Assembled fasta file'/>
+  
+      <!-- Optional -->
+
+    </inputs>
+
+    <outputs>
+        <data name='statsfile' format='tabular' label="${tool.name} on ${on_string}: "/>
+    </outputs>
+</tool>