| Previous changeset 6:22080cbb0e2a (2014-11-22) Next changeset 8:b8e69214bfc6 (2014-11-22) |
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Commit message:
add datamash-reverse tool. |
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added:
datamash-reverse.xml test-data/datamash_reverse_input.txt test-data/datamash_reverse_output.txt |
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| diff -r 22080cbb0e2a -r 48bbe512639e datamash-reverse.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/datamash-reverse.xml Sat Nov 22 20:39:44 2014 -0500 |
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| @@ -0,0 +1,64 @@ +<tool id="DatamashReverse" name="Reverse" version="1.0.6"> + <description>columns in a tabular file</description> + + <requirements> + <requirement type="package" version="1.0.6">datamash</requirement> + </requirements> + + <command> + datamash -W reverse < $in_file > $out_file + </command> + <inputs> + <param format="tabular" name="in_file" type="data" label="Select Input Data" help=""/> + </inputs> + <outputs> + <data format="tabular" name="out_file" /> + </outputs> + <tests> + <test> + <param name="in_file" value="datamash_reverse_input.txt" /> + <output name="out_file" file="datamash_reverse_output.txt" /> + </test> + </tests> +<help> + +.. class:: infomark + +**TIP:** Input data must be TAB delimited. If the desired dataset does not appear in the input list, use *Text Manipulation->Convert* to convert it to **Tabular** type. + +----- + +**Syntax** + +This tools reverses the order of columns in a tabular input file. + +----- + +**Example** + +Input file:: + + Genes Sample Counts + NOX1 A1 514 + DcP A2 542 + HH B3 490 + +Output file:: + + Counts Sample Genes + 514 A1 NOX1 + 542 A2 DcP + 490 B3 HH + +----- + +**GNU Datamash** is a Free and Open Source Software, see more details on the Datamash_ Website. + +**GNU Datamash** is also available as a command-line program, see http://www.gnu.org/software/datamash/download/ . + +For more details about supported statistical operations, see Datamash_ website. + +.. _Datamash: http://www.gnu.org/software/datamash/ + +</help> +</tool> |
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| diff -r 22080cbb0e2a -r 48bbe512639e test-data/datamash_reverse_input.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/datamash_reverse_input.txt Sat Nov 22 20:39:44 2014 -0500 |
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| @@ -0,0 +1,4 @@ +Genes Sample Counts +NOX1 A1 514 +DcP A2 542 +HH B3 490 |
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| diff -r 22080cbb0e2a -r 48bbe512639e test-data/datamash_reverse_output.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/datamash_reverse_output.txt Sat Nov 22 20:39:44 2014 -0500 |
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| @@ -0,0 +1,4 @@ +Counts Sample Genes +514 A1 NOX1 +542 A2 DcP +490 B3 HH |