| Previous changeset 5:ac3fed111eb6 (2024-10-04) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tool_collections/galaxy_sequence_utils/fastqtofasta commit a5766d27dcddd1891766476a913d0eae1ec7a3c9 |
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modified:
fastq_to_fasta.xml macros.xml |
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added:
test-data/sanger_full_range_original_sanger.fastqsanger.gz |
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| diff -r ac3fed111eb6 -r 4a3e93647a4e fastq_to_fasta.xml --- a/fastq_to_fasta.xml Fri Oct 04 10:35:33 2024 +0000 +++ b/fastq_to_fasta.xml Sun Nov 23 17:51:12 2025 +0000 |
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| @@ -14,7 +14,7 @@ gx-fastq-to-fasta '$input_file' '$output_file' '${input_file.extension[len('fastq'):]}' ]]></command> <inputs> - <param name="input_file" type="data" format="fastq,fastq.gz,fastq.bz2" label="FASTQ file to convert" /> + <param name="input_file" type="data" format="fastqsanger,fastqcssanger,fastqsanger.gz,fastqcssanger.gz,fastqsanger.bz2,fastqcssanger.bz2" label="FASTQ file to convert" /> </inputs> <outputs> <data name="output_file" format="fasta" /> @@ -25,6 +25,11 @@ <param name="input_file" value="sanger_full_range_original_sanger.fastqsanger" ftype="fastqsanger" /> <output name="output_file" file="fastq_to_fasta_python_1.out" /> </test> + <!-- basic test --> + <test> + <param name="input_file" value="sanger_full_range_original_sanger.fastqsanger.gz" ftype="fastqsanger.gz" /> + <output name="output_file" file="fastq_to_fasta_python_1.out" /> + </test> <!-- color space test --> <test> <param name="input_file" value="sanger_full_range_as_cssanger.fastqcssanger" ftype="fastqcssanger" /> |
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| diff -r ac3fed111eb6 -r 4a3e93647a4e macros.xml --- a/macros.xml Fri Oct 04 10:35:33 2024 +0000 +++ b/macros.xml Sun Nov 23 17:51:12 2025 +0000 |
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| @@ -1,11 +1,11 @@ <macros> - <token name="@TOOL_VERSION@">1.1.5</token> - <token name="@VERSION_SUFFIX@">2</token> - <token name="@PROFILE@">23.1</token> + <token name="@TOOL_VERSION@">1.2</token> + <token name="@VERSION_SUFFIX@">0</token> + <token name="@PROFILE@">24.2</token> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">galaxy_sequence_utils</requirement> <yield/> </requirements> - </xml>> + </xml> </macros> |
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| diff -r ac3fed111eb6 -r 4a3e93647a4e test-data/sanger_full_range_original_sanger.fastqsanger.gz |
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| Binary file test-data/sanger_full_range_original_sanger.fastqsanger.gz has changed |