| Previous changeset 3:196b83ac37f2 (2021-09-25) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/presto commit 1beb51cefbe9e6edc8930c7ae0421f28e7bb93c8 |
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modified:
presto_filterseq.xml |
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| diff -r 196b83ac37f2 -r 4a4e086f6e38 presto_filterseq.xml --- a/presto_filterseq.xml Sat Sep 25 18:30:46 2021 +0000 +++ b/presto_filterseq.xml Fri Oct 04 09:02:30 2024 +0000 |
| b |
| @@ -1,9 +1,9 @@ <tool id="presto_filterseq" name="pRESTO FilterSeq" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> <description>Filters and/or masks reads based on length, quality, missing bases and repeats.</description> - <expand macro="bio_tools"/> <macros> <import>presto_macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> @@ -78,37 +78,37 @@ </outputs> <tests> - <test> + <test expect_num_outputs="1"> <param name="command" value="length"/> <param name="n" value="299"/> <param name="fastq_in" value="presto_filterseq_test_in.fastq"/> <output name="fastq_out" file="presto_filterseq_length_test_out.fastq" sort="true"/> </test> - <test> + <test expect_num_outputs="1"> <param name="command" value="missing"/> <param name="n" value="281"/> <param name="fastq_in" value="presto_filterseq_test_in.fastq"/> <output name="fastq_out" file="presto_filterseq_missing_test_out.fastq" sort="true"/> </test> - <test> + <test expect_num_outputs="1"> <param name="command" value="repeats"/> <param name="n" value="8"/> <param name="fastq_in" value="presto_filterseq_test_in.fastq"/> <output name="fastq_out" file="presto_filterseq_repeats_test_out.fastq" sort="true"/> </test> - <test> + <test expect_num_outputs="1"> <param name="command" value="quality"/> <param name="q" value="30"/> <param name="fastq_in" value="presto_filterseq_test_in.fastq"/> <output name="fastq_out" file="presto_filterseq_quality_test_out.fastq" sort="true"/> </test> - <test> + <test expect_num_outputs="1"> <param name="command" value="maskqual"/> <param name="q" value="30"/> <param name="fastq_in" value="presto_filterseq_test_in.fastq"/> <output name="fastq_out" file="presto_filterseq_maskqual_test_out.fastq" sort="true"/> </test> - <test> + <test expect_num_outputs="1"> <param name="command" value="trimqual"/> <param name="q" value="30"/> <param name="fastq_in" value="presto_filterseq_test_in.fastq"/> |