Repository 'ega_download_streamer'
hg clone https://toolshed.g2.bx.psu.edu/repos/yhoogstrate/ega_download_streamer

Changeset 2:4a8332665db3 (2016-03-29)
Previous changeset 1:5bfcb2bffd03 (2016-03-29) Next changeset 3:a1f6611f0533 (2016-03-29)
Commit message:
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit 63cc1d3eba84a01ae7e9da734ed91f5b531e4a91-dirty
modified:
ega_download_streamer.xml
b
diff -r 5bfcb2bffd03 -r 4a8332665db3 ega_download_streamer.xml
--- a/ega_download_streamer.xml Tue Mar 29 05:37:45 2016 -0400
+++ b/ega_download_streamer.xml Tue Mar 29 05:45:20 2016 -0400
b
@@ -23,7 +23,7 @@
         
         echo "Creating an encryption request at server" && 
         java -jar
-            "\$EGA_DOWNLOAD_STREAMER_ROOT_DIR/jars/EgaDemoClient.jar"
+            "\$JAVA_JAR_PATH/EgaDemoClient.jar"
             -pf "credentials.txt"
             -rf "$ega_file_identifier"
             -re "$encryption_key"
@@ -31,7 +31,7 @@
         
         echo "\n\n\nDownloading request" && 
         java -jar
-            "\$EGA_DOWNLOAD_STREAMER_ROOT_DIR/jars/EgaDemoClient.jar"
+            "\$JAVA_JAR_PATH/EgaDemoClient.jar"
             -pf "credentials.txt"
             -dr "${random_request_uid}"
             -nt 7 > download.log && 
@@ -44,7 +44,7 @@
         
         echo "\n\n\n Decrpyting \$ENCRYPTED_FILES_NAME to \$DECRYPTED_FILES_NAME" && 
         java -jar
-            "\$EGA_DOWNLOAD_STREAMER_ROOT_DIR/jars/EgaDemoClient.jar"
+            "\$JAVA_JAR_PATH/EgaDemoClient.jar"
             -pf credentials.txt
             -dc "\$ENCRYPTED_FILES_NAME"
             -dck "$encryption_key" &&