Repository 'krakentools_beta_diversity'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/krakentools_beta_diversity

Changeset 1:4b32f3b4a851 (2023-02-13)
Previous changeset 0:fc2077c654fb (2023-01-13) Next changeset 2:214ece7f1216 (2023-03-06)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 28a15bb06175426ba161f346dff983f3cdd0fc10
added:
test-data/combined_kreport.tabular
test-data/only_combined_count.tabular
b
diff -r fc2077c654fb -r 4b32f3b4a851 test-data/combined_kreport.tabular
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/combined_kreport.tabular Mon Feb 13 10:23:28 2023 +0000
b
b'@@ -0,0 +1,11351 @@\n+24.8031\t21685466\t21685466\t21579435\t21579435\t106031\t106031\tU\t0\tunclassified\n+75.1969\t65745113\t77216\t38851676\t12709\t26893437\t64507\tR\t1\troot\n+74.5575\t65186014\t5846\t38357104\t5793\t26828910\t53\tR1\t131567\t  cellular organisms\n+74.5382\t65169137\t558022\t38340776\t116876\t26828361\t441146\tD\t2\t    Bacteria\n+71.7741\t62752518\t92639\t37924629\t48321\t24827889\t44318\tD1\t1783272\t      Terrabacteria group\n+66.2740\t57943749\t504093\t33161332\t339823\t24782417\t164270\tP\t1239\t        Firmicutes\n+38.5054\t33665471\t1015370\t9055341\t5860\t24610130\t1009510\tC\t91061\t          Bacilli\n+37.1469\t32477789\t145939\t8923148\t11674\t23554641\t134265\tO\t186826\t            Lactobacillales\n+26.7162\t23358109\t22391\t53780\t73\t23304329\t22318\tF\t81852\t              Enterococcaceae\n+26.6869\t23332499\t3854263\t52357\t3033\t23280142\t3851230\tG\t1350\t                Enterococcus\n+21.9036\t19150441\t19054995\t33130\t32928\t19117311\t19022067\tS\t1352\t                  Enterococcus faecium\n+0.0631\t55161\t55161\t175\t175\t54986\t54986\tS1\t1305849\t                    Enterococcus faecium Aus0085\n+0.0203\t17782\t17782\t27\t27\t17755\t17755\tS1\t333849\t                    Enterococcus faecium DO\n+0.0158\t13797\t13797\t0\t0\t13797\t13797\tS1\t565663\t                    Enterococcus faecium Com15\n+0.0044\t3869\t3869\t0\t0\t3869\t3869\tS1\t1158600\t                    Enterococcus faecium ATCC 8459 = NRRL B-2354\n+0.0038\t3314\t3314\t0\t0\t3314\t3314\tS1\t1328870\t                    Enterococcus faecium UC7251\n+0.0017\t1523\t1523\t0\t0\t1523\t1523\tS1\t1344042\t                    Enterococcus faecium T110\n+0.2121\t185426\t185426\t327\t327\t185099\t185099\tS\t33945\t                  Enterococcus avium\n+0.0402\t35146\t34886\t11427\t11420\t23719\t23466\tS\t1351\t                  Enterococcus faecalis\n+0.0001\t64\t64\t1\t1\t63\t63\tS1\t936153\t                    Enterococcus faecalis 62\n+0.0001\t57\t57\t1\t1\t56\t56\tS1\t699186\t                    Enterococcus faecalis R712\n+0.0000\t42\t42\t0\t0\t42\t42\tS1\t1201292\t                    Enterococcus faecalis ATCC 29212\n+0.0000\t42\t42\t2\t2\t40\t40\tS1\t565651\t                    Enterococcus faecalis ARO1/DG\n+0.0000\t24\t24\t0\t0\t24\t24\tS1\t1287066\t                    Enterococcus faecalis DENG1\n+0.0000\t20\t20\t3\t3\t17\t17\tS1\t1206105\t                    Enterococcus faecalis D32\n+0.0000\t6\t6\t0\t0\t6\t6\tS1\t226185\t                    Enterococcus faecalis V583\n+0.0000\t5\t5\t0\t0\t5\t5\tS1\t1157365\t                    Enterococcus faecalis EnGen0107\n+0.0251\t21913\t21913\t350\t350\t21563\t21563\tS\t53345\t                  Enterococcus durans\n+0.0215\t18784\t18546\t214\t214\t18570\t18332\tS\t1354\t                  Enterococcus hirae\n+0.0003\t238\t238\t0\t0\t238\t238\tS1\t768486\t                    Enterococcus hirae ATCC 9790\n+0.0166\t14552\t14552\t100\t100\t14452\t14452\tS\t357441\t                  Enterococcus lactis\n+0.0160\t14027\t13743\t441\t439\t13586\t13304\tS\t53346\t                  Enterococcus mundtii\n+0.0003\t284\t284\t2\t2\t282\t282\tS1\t1300150\t                    Enterococcus mundtii QU 25\n+0.0130\t11387\t11342\t124\t119\t11263\t11223\tS\t37734\t                  Enterococcus casseliflavus\n+0.0001\t45\t45\t5\t5\t40\t40\tS1\t565655\t                    Enterococcus casseliflavus EC20\n+0.0115\t10044\t9\t397\t9\t9647\t0\tG1\t2608891\t                  unclassified Enterococcus\n+0.0062\t5439\t5439\t76\t76\t5363\t5363\tS\t2060307\t                    Enterococcus sp. FDAARGOS_375\n+0.0043\t3725\t3725\t0\t0\t3725\t3725\tS\t2603296\t                    Enterococcus sp. DA9\n+0.0005\t435\t435\t96\t96\t339\t339\tS\t2420313\t                    Enterococcus sp. FDAARGOS_553\n+0.0004\t366\t366\t204\t204\t162\t162\tS\t2582830\t                    Enterococcus sp. M190262\n+0.0001\t70\t70\t12\t12\t58\t58\tS\t2057791\t                    Enterococcus sp. CR-Ec1\n+0.0063\t5491\t5491\t34\t34\t5457\t5457\tS\t417368\t                  Enterococcus thailandicus\n+0.0056\t4928\t4928\t2123\t2123\t2805\t2805\tS\t44008\t                  Enterococcus cecorum\n+0.0027\t2394\t2394\t16\t16\t2378\t2378\tS\t1805431\t                  Enterococcus saigonensis\n+0.0015\t1355\t1355\t55\t55\t1300\t1300\tS\t118060\t                  Enterococcus rotai\n+0.0014\t1241\t1241\t139\t139\t1102\t1102\tS\t71452\t                  Enterococcus raffinosus\n+0.0005\t455'..b"10942\t                    Lactobacillus phage 521B\n+0.0000\t1\t0\t1\t0\t0\t0\tP\t2731361\t        Peploviricota\n+0.0000\t1\t0\t1\t0\t0\t0\tC\t2731363\t          Herviviricetes\n+0.0000\t1\t0\t1\t0\t0\t0\tO\t548681\t            Herpesvirales\n+0.0000\t1\t0\t1\t0\t0\t0\tF\t548682\t              Alloherpesviridae\n+0.0000\t1\t0\t1\t0\t0\t0\tG\t692605\t                Batrachovirus\n+0.0000\t1\t1\t1\t1\t0\t0\tS\t1987509\t                  Ranid herpesvirus 3\n+0.0000\t34\t0\t34\t0\t0\t0\tD1\t2559587\t    Riboviria\n+0.0000\t32\t0\t32\t0\t0\t0\tK\t2732396\t      Orthornavirae\n+0.0000\t31\t0\t31\t0\t0\t0\tP\t2732406\t        Kitrinoviricota\n+0.0000\t31\t0\t31\t0\t0\t0\tC\t2732461\t          Alsuviricetes\n+0.0000\t31\t0\t31\t0\t0\t0\tO\t2732544\t            Martellivirales\n+0.0000\t31\t0\t31\t0\t0\t0\tF\t69973\t              Closteroviridae\n+0.0000\t31\t0\t31\t0\t0\t0\tG\t67753\t                Crinivirus\n+0.0000\t31\t31\t31\t31\t0\t0\tS\t31713\t                  Lettuce infectious yellows virus\n+0.0000\t1\t0\t1\t0\t0\t0\tP\t2732408\t        Pisuviricota\n+0.0000\t1\t0\t1\t0\t0\t0\tC\t2732506\t          Pisoniviricetes\n+0.0000\t1\t0\t1\t0\t0\t0\tO\t76804\t            Nidovirales\n+0.0000\t1\t0\t1\t0\t0\t0\tO1\t2499399\t              Cornidovirineae\n+0.0000\t1\t0\t1\t0\t0\t0\tF\t11118\t                Coronaviridae\n+0.0000\t1\t0\t1\t0\t0\t0\tF1\t2501931\t                  Orthocoronavirinae\n+0.0000\t1\t0\t1\t0\t0\t0\tG\t693996\t                    Alphacoronavirus\n+0.0000\t1\t0\t1\t0\t0\t0\tG1\t2509509\t                      Rhinacovirus\n+0.0000\t1\t1\t1\t1\t0\t0\tS\t693998\t                        Rhinolophus bat coronavirus HKU2\n+0.0000\t2\t0\t2\t0\t0\t0\tD2\t2585030\t      unclassified Riboviria\n+0.0000\t2\t0\t2\t0\t0\t0\tD3\t1922348\t        unclassified RNA viruses ShiM-2016\n+0.0000\t2\t2\t2\t2\t0\t0\tS\t1922687\t          Beihai sobemo-like virus 16\n+0.0000\t25\t0\t25\t0\t0\t0\tD1\t2732004\t    Varidnaviria\n+0.0000\t25\t0\t25\t0\t0\t0\tK\t2732005\t      Bamfordvirae\n+0.0000\t25\t0\t25\t0\t0\t0\tP\t2732007\t        Nucleocytoviricota\n+0.0000\t23\t0\t23\t0\t0\t0\tC\t2732523\t          Megaviricetes\n+0.0000\t21\t0\t21\t0\t0\t0\tO\t2732554\t            Imitervirales\n+0.0000\t21\t0\t21\t0\t0\t0\tF\t549779\t              Mimiviridae\n+0.0000\t21\t0\t21\t0\t0\t0\tG\t315393\t                Mimivirus\n+0.0000\t21\t0\t21\t0\t0\t0\tG1\t2501774\t                  unclassified Mimivirus\n+0.0000\t21\t21\t21\t21\t0\t0\tS\t1094892\t                    Megavirus chiliensis\n+0.0000\t1\t0\t1\t0\t0\t0\tO\t2732555\t            Pimascovirales\n+0.0000\t1\t0\t1\t0\t0\t0\tF\t10486\t              Iridoviridae\n+0.0000\t1\t0\t1\t0\t0\t0\tF1\t2017757\t                Betairidovirinae\n+0.0000\t1\t1\t1\t1\t0\t0\tG\t10491\t                  Chloriridovirus\n+0.0000\t1\t0\t1\t0\t0\t0\tO\t2732524\t            Algavirales\n+0.0000\t1\t0\t1\t0\t0\t0\tF\t10501\t              Phycodnaviridae\n+0.0000\t1\t0\t1\t0\t0\t0\tF1\t455363\t                unclassified Phycodnaviridae\n+0.0000\t1\t1\t1\t1\t0\t0\tS\t455364\t                  Chrysochromulina ericina virus\n+0.0000\t2\t0\t2\t0\t0\t0\tC\t2732525\t          Pokkesviricetes\n+0.0000\t2\t0\t2\t0\t0\t0\tO\t2732527\t            Chitovirales\n+0.0000\t2\t0\t2\t0\t0\t0\tF\t10240\t              Poxviridae\n+0.0000\t1\t0\t1\t0\t0\t0\tF1\t10284\t                Entomopoxvirinae\n+0.0000\t1\t0\t1\t0\t0\t0\tG\t10286\t                  Betaentomopoxvirus\n+0.0000\t1\t0\t1\t0\t0\t0\tS\t1993631\t                    Choristoneura rosaceana entomopoxvirus\n+0.0000\t1\t1\t1\t1\t0\t0\tS1\t1293539\t                      Choristoneura rosaceana entomopoxvirus 'L'\n+0.0000\t1\t0\t1\t0\t0\t0\tF1\t10241\t                Chordopoxvirinae\n+0.0000\t1\t0\t1\t0\t0\t0\tG\t10282\t                  Yatapoxvirus\n+0.0000\t1\t1\t1\t1\t0\t0\tS\t99000\t                    Tanapox virus\n+0.0000\t2\t0\t2\t0\t0\t0\tD1\t2731342\t    Monodnaviria\n+0.0000\t2\t0\t2\t0\t0\t0\tK\t2732091\t      Sangervirae\n+0.0000\t2\t0\t2\t0\t0\t0\tP\t2732412\t        Phixviricota\n+0.0000\t2\t0\t2\t0\t0\t0\tC\t2732413\t          Malgrandaviricetes\n+0.0000\t2\t0\t2\t0\t0\t0\tO\t2732414\t            Petitvirales\n+0.0000\t2\t0\t2\t0\t0\t0\tF\t10841\t              Microviridae\n+0.0000\t2\t0\t2\t0\t0\t0\tF1\t117574\t                unclassified Microviridae\n+0.0000\t2\t2\t2\t2\t0\t0\tS\t1655645\t                  Parabacteroides phage YZ-2015b\n+0.0000\t30\t0\t22\t0\t8\t0\tR1\t2787854\t  other entries\n+0.0000\t30\t28\t22\t22\t8\t6\tR2\t28384\t    other sequences\n+0.0000\t2\t0\t0\t0\t2\t0\tR3\t36549\t      plasmids\n+0.0000\t2\t2\t0\t0\t2\t2\tS\t2524\t        Plasmid pAM77\n"
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diff -r fc2077c654fb -r 4b32f3b4a851 test-data/only_combined_count.tabular
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/only_combined_count.tabular Mon Feb 13 10:23:28 2023 +0000
b
b'@@ -0,0 +1,11351 @@\n+24.8031\t21685466\t21685466\tU\t0\tunclassified\n+75.1969\t65745113\t77216\tR\t1\troot\n+74.5575\t65186014\t5846\tR1\t131567\t  cellular organisms\n+74.5382\t65169137\t558022\tD\t2\t    Bacteria\n+71.7741\t62752518\t92639\tD1\t1783272\t      Terrabacteria group\n+66.2740\t57943749\t504093\tP\t1239\t        Firmicutes\n+38.5054\t33665471\t1015370\tC\t91061\t          Bacilli\n+37.1469\t32477789\t145939\tO\t186826\t            Lactobacillales\n+26.7162\t23358109\t22391\tF\t81852\t              Enterococcaceae\n+26.6869\t23332499\t3854263\tG\t1350\t                Enterococcus\n+21.9036\t19150441\t19054995\tS\t1352\t                  Enterococcus faecium\n+0.0631\t55161\t55161\tS1\t1305849\t                    Enterococcus faecium Aus0085\n+0.0203\t17782\t17782\tS1\t333849\t                    Enterococcus faecium DO\n+0.0158\t13797\t13797\tS1\t565663\t                    Enterococcus faecium Com15\n+0.0044\t3869\t3869\tS1\t1158600\t                    Enterococcus faecium ATCC 8459 = NRRL B-2354\n+0.0038\t3314\t3314\tS1\t1328870\t                    Enterococcus faecium UC7251\n+0.0017\t1523\t1523\tS1\t1344042\t                    Enterococcus faecium T110\n+0.2121\t185426\t185426\tS\t33945\t                  Enterococcus avium\n+0.0402\t35146\t34886\tS\t1351\t                  Enterococcus faecalis\n+0.0001\t64\t64\tS1\t936153\t                    Enterococcus faecalis 62\n+0.0001\t57\t57\tS1\t699186\t                    Enterococcus faecalis R712\n+0.0000\t42\t42\tS1\t1201292\t                    Enterococcus faecalis ATCC 29212\n+0.0000\t42\t42\tS1\t565651\t                    Enterococcus faecalis ARO1/DG\n+0.0000\t24\t24\tS1\t1287066\t                    Enterococcus faecalis DENG1\n+0.0000\t20\t20\tS1\t1206105\t                    Enterococcus faecalis D32\n+0.0000\t6\t6\tS1\t226185\t                    Enterococcus faecalis V583\n+0.0000\t5\t5\tS1\t1157365\t                    Enterococcus faecalis EnGen0107\n+0.0251\t21913\t21913\tS\t53345\t                  Enterococcus durans\n+0.0215\t18784\t18546\tS\t1354\t                  Enterococcus hirae\n+0.0003\t238\t238\tS1\t768486\t                    Enterococcus hirae ATCC 9790\n+0.0166\t14552\t14552\tS\t357441\t                  Enterococcus lactis\n+0.0160\t14027\t13743\tS\t53346\t                  Enterococcus mundtii\n+0.0003\t284\t284\tS1\t1300150\t                    Enterococcus mundtii QU 25\n+0.0130\t11387\t11342\tS\t37734\t                  Enterococcus casseliflavus\n+0.0001\t45\t45\tS1\t565655\t                    Enterococcus casseliflavus EC20\n+0.0115\t10044\t9\tG1\t2608891\t                  unclassified Enterococcus\n+0.0062\t5439\t5439\tS\t2060307\t                    Enterococcus sp. FDAARGOS_375\n+0.0043\t3725\t3725\tS\t2603296\t                    Enterococcus sp. DA9\n+0.0005\t435\t435\tS\t2420313\t                    Enterococcus sp. FDAARGOS_553\n+0.0004\t366\t366\tS\t2582830\t                    Enterococcus sp. M190262\n+0.0001\t70\t70\tS\t2057791\t                    Enterococcus sp. CR-Ec1\n+0.0063\t5491\t5491\tS\t417368\t                  Enterococcus thailandicus\n+0.0056\t4928\t4928\tS\t44008\t                  Enterococcus cecorum\n+0.0027\t2394\t2394\tS\t1805431\t                  Enterococcus saigonensis\n+0.0015\t1355\t1355\tS\t118060\t                  Enterococcus rotai\n+0.0014\t1241\t1241\tS\t71452\t                  Enterococcus raffinosus\n+0.0005\t455\t455\tS\t1353\t                  Enterococcus gallinarum\n+0.0004\t337\t337\tS\t160453\t                  Enterococcus gilvus\n+0.0003\t227\t227\tS\t2005703\t                  Enterococcus wangshanyuanii\n+0.0001\t76\t76\tS\t2839759\t                  Enterococcus innesii\n+0.0000\t12\t12\tS\t246144\t                  Enterococcus italicus\n+0.0026\t2276\t51\tG\t2737\t                Vagococcus\n+0.0012\t1009\t1009\tS\t218144\t                  Vagococcus carniphilus\n+0.0006\t557\t557\tS\t2738\t                  Vagococcus fluvialis\n+0.0002\t142\t142\tS\t633807\t                  Vagococcus penaei\n+0.0002\t135\t135\tS\t2571750\t                  Vagococcus zengguangii\n+0.0002\t133\t133\tS\t2562451\t                  Vagococcus xieshaowenii\n+0.0001\t89\t89\tS\t519472\t                  Vagococcus teuberi\n+0.0001\t87\t87\tS\t81947\t                  Vagococcus lutrae\n+0.0000\t27\t27\tS\t2714947\t              '..b"\t1\t0\tG\t2560128\t                Eneladusvirus\n+0.0000\t1\t0\tS\t2560849\t                  Eneladusvirus Yen904\n+0.0000\t1\t1\tS1\t2052742\t                    Yersinia phage fHe-Yen9-04\n+0.0000\t1\t0\tG\t2733142\t                Yoloswagvirus\n+0.0000\t1\t0\tG1\t2788656\t                  unclassified Yoloswagvirus\n+0.0000\t1\t1\tS\t2797313\t                    Erwinia phage pEa_SNUABM_5\n+0.0000\t1\t0\tF\t2560065\t              Herelleviridae\n+0.0000\t1\t0\tG\t2843105\t                Tybeckvirus\n+0.0000\t1\t0\tS\t2845127\t                  Tybeckvirus tv521B\n+0.0000\t1\t1\tS1\t2510942\t                    Lactobacillus phage 521B\n+0.0000\t1\t0\tP\t2731361\t        Peploviricota\n+0.0000\t1\t0\tC\t2731363\t          Herviviricetes\n+0.0000\t1\t0\tO\t548681\t            Herpesvirales\n+0.0000\t1\t0\tF\t548682\t              Alloherpesviridae\n+0.0000\t1\t0\tG\t692605\t                Batrachovirus\n+0.0000\t1\t1\tS\t1987509\t                  Ranid herpesvirus 3\n+0.0000\t34\t0\tD1\t2559587\t    Riboviria\n+0.0000\t32\t0\tK\t2732396\t      Orthornavirae\n+0.0000\t31\t0\tP\t2732406\t        Kitrinoviricota\n+0.0000\t31\t0\tC\t2732461\t          Alsuviricetes\n+0.0000\t31\t0\tO\t2732544\t            Martellivirales\n+0.0000\t31\t0\tF\t69973\t              Closteroviridae\n+0.0000\t31\t0\tG\t67753\t                Crinivirus\n+0.0000\t31\t31\tS\t31713\t                  Lettuce infectious yellows virus\n+0.0000\t1\t0\tP\t2732408\t        Pisuviricota\n+0.0000\t1\t0\tC\t2732506\t          Pisoniviricetes\n+0.0000\t1\t0\tO\t76804\t            Nidovirales\n+0.0000\t1\t0\tO1\t2499399\t              Cornidovirineae\n+0.0000\t1\t0\tF\t11118\t                Coronaviridae\n+0.0000\t1\t0\tF1\t2501931\t                  Orthocoronavirinae\n+0.0000\t1\t0\tG\t693996\t                    Alphacoronavirus\n+0.0000\t1\t0\tG1\t2509509\t                      Rhinacovirus\n+0.0000\t1\t1\tS\t693998\t                        Rhinolophus bat coronavirus HKU2\n+0.0000\t2\t0\tD2\t2585030\t      unclassified Riboviria\n+0.0000\t2\t0\tD3\t1922348\t        unclassified RNA viruses ShiM-2016\n+0.0000\t2\t2\tS\t1922687\t          Beihai sobemo-like virus 16\n+0.0000\t25\t0\tD1\t2732004\t    Varidnaviria\n+0.0000\t25\t0\tK\t2732005\t      Bamfordvirae\n+0.0000\t25\t0\tP\t2732007\t        Nucleocytoviricota\n+0.0000\t23\t0\tC\t2732523\t          Megaviricetes\n+0.0000\t21\t0\tO\t2732554\t            Imitervirales\n+0.0000\t21\t0\tF\t549779\t              Mimiviridae\n+0.0000\t21\t0\tG\t315393\t                Mimivirus\n+0.0000\t21\t0\tG1\t2501774\t                  unclassified Mimivirus\n+0.0000\t21\t21\tS\t1094892\t                    Megavirus chiliensis\n+0.0000\t1\t0\tO\t2732555\t            Pimascovirales\n+0.0000\t1\t0\tF\t10486\t              Iridoviridae\n+0.0000\t1\t0\tF1\t2017757\t                Betairidovirinae\n+0.0000\t1\t1\tG\t10491\t                  Chloriridovirus\n+0.0000\t1\t0\tO\t2732524\t            Algavirales\n+0.0000\t1\t0\tF\t10501\t              Phycodnaviridae\n+0.0000\t1\t0\tF1\t455363\t                unclassified Phycodnaviridae\n+0.0000\t1\t1\tS\t455364\t                  Chrysochromulina ericina virus\n+0.0000\t2\t0\tC\t2732525\t          Pokkesviricetes\n+0.0000\t2\t0\tO\t2732527\t            Chitovirales\n+0.0000\t2\t0\tF\t10240\t              Poxviridae\n+0.0000\t1\t0\tF1\t10284\t                Entomopoxvirinae\n+0.0000\t1\t0\tG\t10286\t                  Betaentomopoxvirus\n+0.0000\t1\t0\tS\t1993631\t                    Choristoneura rosaceana entomopoxvirus\n+0.0000\t1\t1\tS1\t1293539\t                      Choristoneura rosaceana entomopoxvirus 'L'\n+0.0000\t1\t0\tF1\t10241\t                Chordopoxvirinae\n+0.0000\t1\t0\tG\t10282\t                  Yatapoxvirus\n+0.0000\t1\t1\tS\t99000\t                    Tanapox virus\n+0.0000\t2\t0\tD1\t2731342\t    Monodnaviria\n+0.0000\t2\t0\tK\t2732091\t      Sangervirae\n+0.0000\t2\t0\tP\t2732412\t        Phixviricota\n+0.0000\t2\t0\tC\t2732413\t          Malgrandaviricetes\n+0.0000\t2\t0\tO\t2732414\t            Petitvirales\n+0.0000\t2\t0\tF\t10841\t              Microviridae\n+0.0000\t2\t0\tF1\t117574\t                unclassified Microviridae\n+0.0000\t2\t2\tS\t1655645\t                  Parabacteroides phage YZ-2015b\n+0.0000\t30\t0\tR1\t2787854\t  other entries\n+0.0000\t30\t28\tR2\t28384\t    other sequences\n+0.0000\t2\t0\tR3\t36549\t      plasmids\n+0.0000\t2\t2\tS\t2524\t        Plasmid pAM77\n"