Repository 'ngchm'
hg clone https://toolshed.g2.bx.psu.edu/repos/insilico-bob/ngchm

Changeset 47:4b522710a5c4 (2016-12-30)
Previous changeset 46:193f03a84cf5 (2016-12-30) Next changeset 48:24b673f2606b (2016-12-30)
Commit message:
Uploaded
modified:
tool_dependencies.xml
b
diff -r 193f03a84cf5 -r 4b522710a5c4 tool_dependencies.xml
--- a/tool_dependencies.xml Fri Dec 30 11:45:08 2016 -0500
+++ b/tool_dependencies.xml Fri Dec 30 12:04:34 2016 -0500
b
@@ -1,8 +1,8 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <install version="1.0">
-     <actions>
-       <action type="shell_command">hg clone https://insilico-bob@toolshed.g2.bx.psu.edu/repos/insilico-bob/ngchm</action>
+    <actions>
+        <action type="shell_command">cd $GALAXY_ROOT_DIR</action>
+        <action type="shell_command">hg clone https://insilico-bob@toolshed.g2.bx.psu.edu/repos/insilico-bob/ngchm</action>
         <action type="shell_command">mkdir -p -m 777 $GALAXY_ROOT_DIR/test-data/MDAheatmap</action>
         <action type="move_directory_files">
            <source_directory>./TestFiles</source_directory>
@@ -16,6 +16,5 @@
         <action type="shell_command">cd $GALAXY_ROOT_DIR/config/plugins/visualizations/MDAheatmap/templates</action>
         <action type="shell_command">make</action>
      </actions>
-   </install>
    <readme>Completed adding MDAnderson ngchm tool to Galaxy</readme>
 </tool_dependency>