Repository 'seqkit_fx2tab'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/seqkit_fx2tab

Changeset 2:4cf00d20acab (2022-11-03)
Previous changeset 1:4beeb5c54821 (2022-10-31) Next changeset 3:b1b12eaebfa9 (2022-11-06)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqkit commit 202bb1229cb0b8e8040a87d140edb6fdf7654628
added:
test-data/locate_output1.tabular
test-data/locate_output2.bed
test-data/locate_output3.gtf
test-data/motif_sequence.fasta
b
diff -r 4beeb5c54821 -r 4cf00d20acab test-data/locate_output1.tabular
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/locate_output1.tabular Thu Nov 03 19:36:37 2022 +0000
b
@@ -0,0 +1,95 @@
+seqID patternName pattern strand start end matched
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 251 256 ATAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 435 440 AGAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 660 665 ATAGAG
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 741 746 AAAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 852 857 ATAAAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 1142 1147 AAAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 1320 1325 ATAGGT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 1621 1626 ATAAAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 1778 1783 AGAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 1784 1789 ATACAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 1810 1815 ATAAAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2038 2043 ATGGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2120 2125 CTAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2235 2240 ATAGTT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2243 2248 ATAAAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2318 2323 CTAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2527 2532 ATAAAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2549 2554 AAAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2603 2608 ATATAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2651 2656 ATGGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2726 2731 ATAGTT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2744 2749 ATAAAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 2902 2907 TTAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 3041 3046 AAAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 3488 3493 ATGGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 3539 3544 TTAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 3675 3680 AAAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 3739 3744 ATGGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 3770 3775 ATAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 3825 3830 AGAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 3862 3867 AAAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 3870 3875 ATAGGT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 4052 4057 ATATAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 4068 4073 AGAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 4080 4085 ACAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 4388 4393 TTAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 4446 4451 ATAGAG
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 4500 4505 AAAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 4563 4568 ATAGAA
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 4607 4612 ATAGAA
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 4675 4680 ATGGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT + 4692 4697 ATGGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 4603 4608 ATAAAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 4459 4464 TTAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 4223 4228 GTAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 4072 4077 ATGGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 4052 4057 ATATAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 3634 3639 ATAAAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 3566 3571 ATAGAC
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 2918 2923 ACAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 2778 2783 ATACAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 2709 2714 ATAAAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 2644 2649 ATAAAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 2603 2608 ATATAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 2531 2536 ATTGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 1734 1739 ATTGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 1601 1606 ACAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 1438 1443 ATAGAA
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 1422 1427 ATAGGT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 1329 1334 ATAGAG
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 1146 1151 ATACAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 1121 1126 ATACAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 811 816 ATAGCT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 764 769 GTAGAT
+ENA|AB011145|AB011145.1 ATAGAT ATAGAT - 656 661 ATAGTT
+ENA|M10051|M10051.1 ATAGAT ATAGAT + 250 255 ATGGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT + 664 669 AAAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT + 1987 1992 ACAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT + 3540 3545 AGAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT + 3561 3566 AGAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT + 3886 3891 ATGGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT + 4400 4405 AGAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT + 4413 4418 ATACAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 3688 3693 ATAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 3065 3070 ATAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 3061 3066 ATAAAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 3025 3030 AAAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 2956 2961 ATAGGT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 2828 2833 AGAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 2719 2724 AAAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 1975 1980 ATAAAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 1951 1956 ATAGGT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 1909 1914 AAAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 1659 1664 AAAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 1417 1422 ATAGAA
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 1319 1324 TTAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 802 807 ACAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 691 696 ACAGAT
+ENA|M10051|M10051.1 ATAGAT ATAGAT - 415 420 ATAGAC
+ENA|BC112106|BC112106.1 ATAGAT ATAGAT + 386 391 ATGGAT
+ENA|BC112106|BC112106.1 ATAGAT ATAGAT - 1000 1005 ATAGAT
+ENA|BC112106|BC112106.1 ATAGAT ATAGAT - 985 990 GTAGAT
+ENA|BC112106|BC112106.1 ATAGAT ATAGAT - 742 747 AAAGAT
+ENA|BC112106|BC112106.1 ATAGAT ATAGAT - 700 705 GTAGAT
b
diff -r 4beeb5c54821 -r 4cf00d20acab test-data/locate_output2.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/locate_output2.bed Thu Nov 03 19:36:37 2022 +0000
[
b'@@ -0,0 +1,202 @@\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t136\t139\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t174\t177\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t254\t257\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t269\t272\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t275\t278\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t296\t299\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t322\t325\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t353\t356\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t377\t380\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t479\t482\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t484\t487\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t487\t490\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t490\t493\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t692\t695\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t695\t698\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t725\t728\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t796\t799\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t814\t817\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t827\t830\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t855\t858\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t890\t893\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t940\t943\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t977\t980\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1028\t1031\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1120\t1123\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1124\t1127\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1145\t1148\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1220\t1223\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1265\t1268\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1346\t1349\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1441\t1444\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1510\t1513\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1629\t1632\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1693\t1696\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1709\t1712\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1730\t1733\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1866\t1869\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1902\t1905\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1972\t1975\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, partial cds.\t1991\t1994\tA[TU]G\t0\t+\n+ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, pa'..b'051|M10051.1 Human insulin receptor mRNA, complete cds.\t3862\t3865\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t3885\t3888\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t3889\t3892\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t3942\t3945\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t3948\t3951\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t3972\t3975\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t4092\t4095\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t4107\t4110\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t4114\t4117\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t4168\t4171\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t4227\t4230\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t4383\t4386\tA[TU]G\t0\t+\n+ENA|M10051|M10051.1 Human insulin receptor mRNA, complete cds.\t4590\t4593\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t87\t90\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t91\t94\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t130\t133\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t188\t191\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t201\t204\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t216\t219\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t342\t345\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t385\t388\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t413\t416\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t513\t516\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t541\t544\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t549\t552\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t573\t576\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t705\t708\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t732\t735\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t754\t757\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t843\t846\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t855\t858\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t948\t951\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t1008\t1011\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t1011\t1014\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t1035\t1038\tA[TU]G\t0\t+\n+ENA|BC112106|BC112106.1 Homo sapiens rhodopsin, mRNA (cDNA clone MGC:138311 IMAGE:8327574), complete cds.\t1078\t1081\tA[TU]G\t0\t+\n'
b
diff -r 4beeb5c54821 -r 4cf00d20acab test-data/locate_output3.gtf
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/locate_output3.gtf Thu Nov 03 19:36:37 2022 +0000
b
@@ -0,0 +1,4 @@
+ENA|AB011145|AB011145.1 SeqKit location 2270 2276 0 + . gene_id "test_motif2"; 
+ENA|AB011145|AB011145.1 SeqKit location 2642 2648 0 + . gene_id "test_motif2"; 
+ENA|AB011145|AB011145.1 SeqKit location 2655 2661 0 + . gene_id "test_motif2"; 
+ENA|AB011145|AB011145.1 SeqKit location 2771 2777 0 + . gene_id "test_motif2"; 
b
diff -r 4beeb5c54821 -r 4cf00d20acab test-data/motif_sequence.fasta
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/motif_sequence.fasta Thu Nov 03 19:36:37 2022 +0000
b
@@ -0,0 +1,4 @@
+>test_motif
+ATATACTAT
+>test_motif2
+ATATTTA