Repository 'saint_preprocessing'
hg clone https://toolshed.g2.bx.psu.edu/repos/bornea/saint_preprocessing

Changeset 77:4ea4e1ea75b5 (2017-03-02)
Previous changeset 76:43b9bad147df (2016-09-02) Next changeset 78:211fd8ae6edc (2017-03-02)
Commit message:
Uploaded
modified:
Protein_report_processing.py
b
diff -r 43b9bad147df -r 4ea4e1ea75b5 Protein_report_processing.py
--- a/Protein_report_processing.py Fri Sep 02 21:41:30 2016 -0400
+++ b/Protein_report_processing.py Thu Mar 02 16:02:22 2017 -0500
[
@@ -17,7 +17,7 @@
 make_bait = sys.argv[6]
 bait_bool = sys.argv[8]
 
-def bait_create(baits, infile):
+def bait_create(baits):
     # Verifies the Baits are valid in the Scaffold file and writes the Bait.txt.
     baits = make_bait.split()
     i = 0
@@ -39,7 +39,7 @@
     bait_file_tmp.close()
 
 if bait_bool == 'false':
-    bait_create(make_bait, infile)
+    bait_create(make_bait)
     bait = "bait.txt"
 else:
     bait_temp_file = open(sys.argv[9], 'r')