| Previous changeset 23:501cd6a5cd31 (2017-10-02) Next changeset 25:a0ae4293a398 (2017-10-02) |
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modified:
survival/survival.xml |
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| diff -r 501cd6a5cd31 -r 51181b91c57e survival/survival.xml --- a/survival/survival.xml Mon Oct 02 09:27:02 2017 -0400 +++ b/survival/survival.xml Mon Oct 02 09:32:44 2017 -0400 |
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| @@ -4,7 +4,7 @@ <requirement type="package" version="2.40_1">r-survival</requirement> </requirements> <command detect_errors="aggressive"> - Rscript '$__tool_directory__/survival.R' + Rscript '$__tool_directory__/survival.R' '$input' '$type' '$error' '$conf_type' '$conf_lower' '$fit' '$png' </command> <inputs> <param format="csv" type="data" name="input" value="" label="survival data" help=" @@ -21,7 +21,6 @@ <option value="fleming-harrington">fleming-harrington</option> <option value="fh2">fh2</option> </param> - <when value="quantile" /> <when value="kaplan-meier"/> <when value="fleming-harrington"/> <when value="fh2"/> @@ -32,6 +31,8 @@ <option value="greenwood">greenwood</option> <option value="tsiatis">tsiatis</option> </param> + <when value="greenwood" /> + <when value="tsiatis"/> </conditional> <conditional name="conf_type"> @@ -41,6 +42,10 @@ <option value="plain">plain</option> <option value="none">none</option> </param> + <when value="log" /> + <when value="log-log"/> + <when value="plain" /> + <when value="none"/> </conditional> <conditional name="conf_lower"> @@ -49,6 +54,9 @@ <option value="peto">peto</option> <option value="modified">modified</option> </param> + <when value="usual" /> + <when value="peto" /> + <when value="modified" /> </conditional> </inputs> |