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Changeset 7:51b6ee65ef7f (2023-04-13)

Previous changeset 6:7abc5f6dd595 (2023-01-22) Next changeset 8:f31125bb85ea (2023-04-25)

Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 2589d2785ca90160a22a5fe14e03311e189ea51d

modified:
funannotate_predict.xml
macros.xml
test-data/genome_masked.fa
test-data/predict_scratch/Genus_species.discrepency.report.txt
test-data/predict_scratch/Genus_species.error.summary.txt
test-data/predict_scratch/Genus_species.stats.json
test-data/predict_scratch/Genus_species.validation.txt

diff -r 7abc5f6dd595 -r 51b6ee65ef7f funannotate_predict.xml
--- a/funannotate_predict.xml Sun Jan 22 17:30:57 2023 +0000
+++ b/funannotate_predict.xml Thu Apr 13 17:16:35 2023 +0000

@@ -371,7 +371,7 @@
                 <not_has_text text="Found 16 alignments, wrote GFF3 and Augustus hints to file"/>
                 <not_has_text text="Extracting hints from RNA-seq BAM file using bam2hints"/>
                 <has_text text="Mapping 13 proteins to genome using diamond and exonerate"/>
-                <has_text text="Found 4 preliminary alignments --> aligning with exonerate"/>
+                <has_text text="Found 4 preliminary alignments with diamond"/>
             </assert_stderr>
         </test>

@@ -436,7 +436,7 @@
                 <not_has_text text="Found 16 alignments, wrote GFF3 and Augustus hints to file"/>
                 <not_has_text text="Extracting hints from RNA-seq BAM file using bam2hints"/>
                 <has_text text="Mapping 13 proteins to genome using diamond and exonerate"/>
-                <has_text text="Found 4 preliminary alignments --> aligning with exonerate"/>
+                <has_text text="Found 4 preliminary alignments with diamond"/>
             </assert_stderr>
         </test>

@@ -509,7 +509,7 @@
                 <has_text text="Found 16 alignments, wrote GFF3 and Augustus hints to file"/>
                 <has_text text="Extracting hints from RNA-seq BAM file using bam2hints"/>
                 <has_text text="Mapping 16 proteins to genome using diamond and exonerate"/>
-                <has_text text="Found 21 preliminary alignments --> aligning with exonerate"/>
+                <has_text text="Found 21 preliminary alignments with diamond"/>
             </assert_stderr>
             <assert_command>
                 <has_text text="--protein_evidence"/>
@@ -583,7 +583,7 @@
                 <not_has_text text="Found 16 alignments, wrote GFF3 and Augustus hints to file"/>
                 <not_has_text text="Extracting hints from RNA-seq BAM file using bam2hints"/>
                 <has_text text="Mapping 16 proteins to genome using diamond and exonerate"/>
-                <has_text text="Found 21 preliminary alignments --> aligning with exonerate"/>
+                <has_text text="Found 21 preliminary alignments with diamond"/>
             </assert_stderr>
             <assert_command>
                 <has_text text="--protein_evidence"/>

diff -r 7abc5f6dd595 -r 51b6ee65ef7f macros.xml
--- a/macros.xml Sun Jan 22 17:30:57 2023 +0000
+++ b/macros.xml Thu Apr 13 17:16:35 2023 +0000

@@ -1,7 +1,7 @@
<?xml version="1.0"?>
<macros>
-    <token name="@TOOL_VERSION@">1.8.9</token>
-    <token name="@VERSION_SUFFIX@">3</token>
+    <token name="@TOOL_VERSION@">1.8.15</token>
+    <token name="@VERSION_SUFFIX@">0</token>

     <xml name="requirements">
         <requirement type="package" version="@TOOL_VERSION@">funannotate</requirement>

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W00C1.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W00C1.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,4084 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W00C1\n+LENG 1354\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:04:56 2016\n+NSEQ 42\n+EFFN 0.679321\n+CKSUM 1578165604\n+STATS LOCAL MSV -13.1616 0.69495\n+STATS LOCAL VITERBI -14.4353 0.69495\n+STATS LOCAL FORWARD -7.3499 0.69495\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.57441 4.16262 2.99810 2.76343 3.12186 3.07323 3.77318 2.63927 2.72202 2.29429 3.49996 3.17298 3.46979 3.15717 2.99681 2.73779 2.88211 2.52749 4.25091 3.39827\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.18691 3.94363 1.88981 0.61958 0.77255 0.00000 *\n+ 1 2.62911 5.02950 2.23384 1.74344 4.30054 3.23321 3.61266 3.74901 2.45053 3.31684 4.14230 2.72854 3.75026 2.76878 2.97863 2.48083 2.93986 3.38757 5.52131 3.88237 1 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03412 3.79084 4.51318 0.61958 0.77255 0.61585 0.77693\n+ 2 2.43849 4.61681 2.63603 2.35102 4.06046 3.12134 3.67576 3.47583 2.53742 3.03286 3.92976 2.75939 3.30297 2.85668 2.98387 2.02088 2.75212 3.11813 5.34660 4.02240 2 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03412 3.79084 4.51318 0.61958 0.77255 0.61585 0.77693\n+ 3 2.50819 4.48365 2.98156 2.41390 3.80268 3.29727 3.59860 3.02388 2.52519 2.84922 3.71772 3.00896 3.77828 2.90867 2.90855 2.40606 2.16579 2.86980 5.14860 3.86479 3 t - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.07774 3.79084 2.95237 0.61958 0.77255 0.61585 0.77693\n+ 4 2.45303 4.37393 3.07931 2.72005 3.70829 3.19950 3.80755 3.07532 2.65557 2.68670 3.75206 3.10400 2.14831 3.06767 2.98981 2.59842 2.66818 2.80090 5.14532 3.67841 4 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.04667 3.74871 3.81451 0.61958 0.77255 0.62985 0.76073\n+ 5 2.75504 4.34975 3.79706 3.25081 3.15934 3.77200 4.05264 2.27308 3.08422 1.49815 3.03425 3.60378 3.76830 3.42870 3.36275 3.07338 3.00031 2.21884 4.88384 3.52906 5 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03555 3.75041 4.47276 0.61958 0.77255 0.47303 0.97580\n+ 6 2.25342 4.27458 3.16843 2.78774 4.05998 3.04638 3.91183 3.34636 2.80219 3.12786 3.96791 3.02231 3.16694 3.14084 3.16963 1.58118 2.48814 3.02484 5.39240 4.13410 6 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03104 3.88369 4.60603 0.61958 0.77255 0.52553 0.89464\n+ 7 2.66779 4.73943 3.05029 2.55470 3.99433 3.42397 3.64278 3.37958 2.28142 2.76413 3.86631 3.02514 3.85273 1.94903 '..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03351 3.80855 4.53090 0.61958 0.77255 0.60255 0.79278\n+ 1347 1.78718 4.36979 2.94274 2.64009 4.06671 2.37848 3.83409 3.42660 2.44894 3.11541 3.97246 3.02705 3.70228 3.05479 3.04232 2.50156 2.75898 3.03630 5.37914 4.11032 1369 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03351 3.80855 4.53090 0.61958 0.77255 0.60255 0.79278\n+ 1348 3.25348 4.65911 4.13591 3.74882 1.78664 4.05293 3.44366 3.03935 3.62290 2.45193 3.67986 3.77565 4.40523 3.76463 3.78558 3.41116 3.49132 2.94536 3.67172 1.24793 1370 y - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03351 3.80855 4.53090 0.61958 0.77255 0.60255 0.79278\n+ 1349 2.66660 4.93953 2.32159 1.68255 4.23414 3.24129 3.64228 3.61752 2.50956 3.25217 4.09859 2.77191 3.76344 2.80723 2.98966 2.60105 2.93387 2.96375 5.48690 4.10293 1371 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.07884 3.80855 2.92561 0.61958 0.77255 0.60255 0.79278\n+ 1350 2.55513 4.70512 2.41241 2.30976 4.21639 3.09898 3.72846 3.71655 2.62129 3.33495 4.19107 1.78795 3.52911 2.92777 3.05544 2.47846 2.90213 3.31322 5.49974 4.12160 1372 n - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03503 3.76475 4.48709 0.61958 0.77255 0.57673 0.82492\n+ 1351 2.52713 4.62036 2.56122 2.41652 4.10662 3.14853 3.73925 3.57717 2.59682 3.20295 4.06169 2.89157 3.73752 2.66602 3.00490 1.70059 2.86458 3.20147 5.40649 4.06301 1373 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03351 3.80855 4.53090 0.61958 0.77255 0.60255 0.79278\n+ 1352 3.04848 4.47189 4.38464 3.83047 3.11050 4.22028 4.54319 2.00917 3.67891 1.20443 2.65686 4.14524 4.49014 3.92405 3.89627 3.54955 3.28587 1.90435 5.09032 3.94632 1374 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03351 3.80855 4.53090 0.61958 0.77255 0.60255 0.79278\n+ 1353 2.72695 4.82964 3.03308 2.56132 4.22330 3.39753 3.59981 3.63509 2.06912 3.18733 4.04291 2.74424 3.55341 2.76055 1.68769 2.76304 2.96834 3.30390 5.32788 4.07028 1375 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03351 3.80855 4.53090 0.61958 0.77255 0.60255 0.79278\n+ 1354 3.10963 4.51643 4.44664 3.89372 3.06332 4.28824 4.57784 1.92985 3.72053 1.12396 2.63392 4.20864 4.53435 3.96293 3.92409 3.62298 3.34172 2.09521 5.07467 3.92677 1376 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02268 3.79772 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W01M6.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W01M6.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,1321 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W01M6\n+LENG 433\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:16:53 2016\n+NSEQ 42\n+EFFN 0.817749\n+CKSUM 1517915722\n+STATS LOCAL MSV -11.7026 0.69878\n+STATS LOCAL VITERBI -12.4285 0.69878\n+STATS LOCAL FORWARD -6.2533 0.69878\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.64874 4.34739 2.98352 2.65645 3.14500 2.96619 3.72043 2.73609 2.68309 2.41542 3.60690 3.11777 3.42799 3.03591 2.92095 2.69183 2.89496 2.57229 4.49671 3.27303\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.06129 4.04908 3.16980 0.61958 0.77255 0.00000 *\n+ 1 2.99274 5.09177 3.40159 2.75925 4.44771 3.64963 3.61478 3.83310 1.82846 3.31408 4.18253 3.17539 4.01658 2.63225 1.30281 3.00178 3.16599 3.52787 5.39574 3.95109 1 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02717 4.01496 4.73730 0.61958 0.77255 0.49600 0.93894\n+ 2 3.09259 4.47438 4.59558 4.02195 3.02431 4.29636 4.59996 1.96958 3.90086 1.27647 1.96237 4.27854 4.54463 4.05677 4.05908 3.61501 3.15485 2.21126 5.05857 3.95696 2 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02676 4.03003 4.75237 0.61958 0.77255 0.50611 0.92340\n+ 3 2.90822 4.34399 3.90187 3.78087 3.52703 4.08102 4.55961 1.20233 3.69527 2.21790 3.40804 4.06087 4.45939 3.98732 3.94445 3.43195 3.17445 1.59809 5.29076 4.06076 3 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02676 4.03003 4.75237 0.61958 0.77255 0.50611 0.92340\n+ 4 2.97332 4.70169 3.59796 3.46161 4.43906 3.38041 4.52404 4.02760 3.53290 3.63629 4.69454 3.75125 0.58063 3.91685 3.75846 3.14630 3.42778 3.65456 5.57990 4.56267 4 P - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02676 4.03003 4.75237 0.61958 0.77255 0.50611 0.92340\n+ 5 2.29186 4.22425 3.42579 3.15083 4.18543 3.01052 4.20902 3.53954 3.15355 3.30374 4.19981 3.32764 3.74763 3.49306 3.44945 1.06659 2.68453 2.90158 5.58065 4.31467 5 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02676 4.03003 4.75237 0.61958 0.77255 0.50611 0.92340\n+ 6 3.11159 4.65104 4.04171 3.63940 3.16523 4.01857 4.36268 2.48797 3.36516 0.90497 3.15961 3.95399 4.41614 3.48231 3.57004 3.45253 3.38016 2.54465 5.02595 3.74647 6 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02676 4.03003 4.75237 0.61958 0.77255 0.50611 0.92340\n+ 7 2.54458 4.34339 2.91937 2.45854 4.08786 3.20552 3.65445 3.50865 2.44550 3.10751 3.91732 2.53639 3.78512 2.80685 '..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02628 4.04778 4.77013 0.61958 0.77255 0.49635 0.93841\n+ 426 2.55894 4.14542 3.69639 3.12141 2.63958 3.59921 3.87253 2.37837 2.90589 2.16923 3.25283 3.44670 3.97349 3.15974 3.22053 2.62367 2.75493 2.32656 4.73704 3.16014 431 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02628 4.04778 4.77013 0.61958 0.77255 0.49635 0.93841\n+ 427 2.55921 4.74833 2.87125 2.36394 4.04304 1.91156 3.70695 3.16737 2.45040 3.06704 3.91319 2.98250 3.84701 2.75078 2.91826 2.70307 2.90557 3.12369 5.32960 4.01937 432 g - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.04143 4.04778 3.76696 0.61958 0.77255 0.49635 0.93841\n+ 428 2.79931 4.24337 4.20599 3.48514 3.41808 3.96864 4.34339 1.55570 3.53651 2.10011 3.33161 3.91999 4.32467 3.81500 3.76746 3.10134 3.04508 1.52243 5.07226 3.86457 433 v - - -\n+ 2.68618 4.42208 2.77520 2.73123 3.46354 2.40513 3.72495 3.29354 2.67741 2.69355 4.24690 2.90347 2.73740 3.18146 2.89801 2.37887 2.77520 2.98518 4.58477 3.61503\n+ 0.04048 3.47164 4.75538 0.56309 0.84268 0.51199 0.91455\n+ 429 2.68305 4.81487 3.13781 2.54430 3.79426 3.49021 3.62089 3.45643 1.83175 3.04450 3.71755 3.03085 3.86880 2.77967 2.03846 2.72553 2.90022 3.07049 5.26264 3.69930 435 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02668 4.03303 4.75538 0.61958 0.77255 0.51199 0.91455\n+ 430 1.75213 4.42239 3.27734 2.74457 3.68986 3.41527 3.78451 2.91366 2.67908 2.67746 3.41247 3.17153 3.86464 2.85205 3.05846 2.42970 2.81028 2.75526 5.08698 3.82553 436 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02668 4.03303 4.75538 0.61958 0.77255 0.51199 0.91455\n+ 431 2.83104 5.11951 2.92240 2.42867 4.48496 3.51299 3.48461 3.88659 1.91361 3.36989 4.18577 3.00288 3.90690 2.55663 1.61155 2.81100 3.03328 3.52942 5.47900 4.19917 437 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02668 4.03303 4.75538 0.61958 0.77255 0.51199 0.91455\n+ 432 2.27231 4.54307 3.08274 2.47455 3.84795 3.23327 3.73904 3.20775 2.59916 2.51551 3.74651 3.06809 2.41509 2.94951 3.01005 2.66174 2.72587 2.91634 5.19570 3.91173 438 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02668 4.03303 4.75538 0.61958 0.77255 0.51199 0.91455\n+ 433 2.55221 4.56809 3.04831 2.64140 4.00030 3.30168 3.53618 3.42810 2.58672 3.00053 3.92179 3.07915 1.82207 2.99651 2.89740 2.51926 2.66257 3.09058 5.31364 4.01905 439 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01804 4.02439 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W02B6.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W02B6.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,799 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W02B6\n+LENG 259\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:06:43 2016\n+NSEQ 41\n+EFFN 0.573059\n+CKSUM 71403834\n+STATS LOCAL MSV -10.7412 0.70258\n+STATS LOCAL VITERBI -11.8067 0.70258\n+STATS LOCAL FORWARD -5.3626 0.70258\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.58551 3.95142 2.93538 2.65555 3.19899 2.68147 3.73109 2.86853 2.68910 2.53366 3.70254 2.99935 3.47440 3.10133 3.03761 2.69046 2.91059 2.66720 4.14923 3.24922\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.05385 3.91683 3.42582 0.61958 0.77255 0.00000 *\n+ 1 2.57563 4.29816 3.42874 2.87971 3.42655 3.42999 3.78252 2.74851 2.59874 1.89027 3.03797 3.27284 3.91669 3.03711 3.02132 2.66738 2.81332 2.53821 4.87996 3.64362 1 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03073 3.89371 4.61606 0.61958 0.77255 0.50735 0.92153\n+ 2 3.28512 4.68059 4.26785 3.98622 0.97760 3.97024 3.88627 2.80601 3.89268 2.17109 3.53292 4.04299 4.42823 4.05476 4.00717 3.55407 3.58620 2.79830 4.12875 2.49298 2 f - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03073 3.89371 4.61606 0.61958 0.77255 0.50735 0.92153\n+ 3 2.52699 4.84771 2.60918 2.20896 4.11201 3.28400 3.32154 3.43124 2.30734 3.06800 3.91257 2.76498 3.75293 2.69515 2.74350 2.47454 2.72876 3.13962 5.33073 3.70604 3 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03073 3.89371 4.61606 0.61958 0.77255 0.50735 0.92153\n+ 4 2.61780 5.07635 2.30159 2.00832 4.37269 3.15166 3.49552 3.83577 2.16309 3.26651 4.14614 2.55311 3.75789 2.71350 2.87941 2.61338 2.79178 3.44361 5.53209 4.13014 4 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03073 3.89371 4.61606 0.61958 0.77255 0.50735 0.92153\n+ 5 3.28512 4.68059 4.26785 3.98622 0.97760 3.97024 3.88627 2.80601 3.89268 2.17109 3.53292 4.04299 4.42823 4.05476 4.00717 3.55407 3.58620 2.79830 4.12875 2.49298 5 f - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03073 3.89371 4.61606 0.61958 0.77255 0.50735 0.92153\n+ 6 2.52574 4.29845 3.38725 2.81673 3.43274 3.51672 3.75806 2.58616 2.58097 2.26866 3.07537 3.23232 3.89498 2.82155 3.02013 2.76287 2.69813 2.35902 4.87883 3.64302 6 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03073 3.89371 4.61606 0.61958 0.77255 0.50735 0.92153\n+ 7 2.49438 4.59633 3.00250 2.46963 3.79998 3.35856 3.45953 2.94077 2.28801 2.75200 3.68084 2.91052 3.79975 2.75316 2.7'..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.04215 3.91412 3.84848 0.61958 0.77255 0.49619 0.93865\n+ 252 2.72228 4.85214 3.33547 2.71103 4.17224 3.54395 3.61290 3.51379 1.95762 3.01720 3.79275 3.13151 3.93412 2.77418 1.52439 2.86875 3.02350 3.23081 5.28280 4.05793 253 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03046 3.90243 4.62478 0.61958 0.77255 0.50708 0.92193\n+ 253 2.89180 4.31740 4.28033 3.72995 3.07498 4.07258 4.37817 1.89583 3.62162 1.87913 3.17915 4.00435 4.39351 3.87003 3.84989 3.38725 3.13313 1.34821 4.99368 3.51638 254 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03046 3.90243 4.62478 0.61958 0.77255 0.50708 0.92193\n+ 254 2.99605 4.54939 3.85523 3.38631 2.26082 3.87705 3.58635 2.81264 3.24695 2.45320 3.57902 3.60461 4.24492 3.30523 3.49280 3.18900 3.23184 2.80947 3.98835 1.38310 255 y - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.04779 3.90243 3.63170 0.61958 0.77255 0.50708 0.92193\n+ 255 2.86895 4.79868 3.35393 2.87800 4.27248 3.16102 3.77328 3.75286 2.20798 3.30302 4.22462 3.25529 3.94230 2.97090 1.13271 2.94613 3.14746 3.42765 5.33779 4.16294 256 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03098 3.88563 4.60797 0.61958 0.77255 0.52231 0.89930\n+ 256 2.39495 4.29242 3.23272 3.00632 4.01335 1.24309 4.10420 3.13144 3.04981 3.16602 4.12473 3.27155 3.75853 3.41004 3.34616 2.56561 2.84496 3.02378 5.39536 4.12823 257 g - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03098 3.88563 4.60797 0.61958 0.77255 0.52231 0.89930\n+ 257 2.85254 5.30913 1.31568 2.03440 4.62051 3.17606 3.72287 4.10485 2.63785 3.65833 4.51978 2.66736 3.79471 2.89706 3.27864 2.66124 3.14816 3.70481 5.83674 4.36108 258 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03098 3.88563 4.60797 0.61958 0.77255 0.52231 0.89930\n+ 258 2.57543 4.72763 2.41079 2.35700 4.35200 1.79355 3.80871 3.83835 2.74701 3.44104 4.28482 2.23390 3.74808 3.00510 3.21046 2.61543 2.93841 3.40418 5.61727 4.25444 259 g - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03098 3.88563 4.60797 0.61958 0.77255 0.52231 0.89930\n+ 259 2.37183 4.27895 3.26612 2.85389 3.88471 3.15333 3.90665 3.14295 2.68120 2.92493 3.81418 3.18256 3.75809 3.16151 3.11452 2.30927 1.70984 2.64002 5.26583 4.01708 260 t - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02096 3.87561 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W02CW.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W02CW.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,934 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W02CW\n+LENG 304\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:02:17 2016\n+NSEQ 42\n+EFFN 0.612671\n+CKSUM 955681691\n+STATS LOCAL MSV -11.4617 0.70115\n+STATS LOCAL VITERBI -11.9236 0.70115\n+STATS LOCAL FORWARD -4.9460 0.70115\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.59865 4.32362 2.92347 2.71276 3.28259 2.77543 3.65001 2.84542 2.60536 2.37332 3.59908 3.17474 3.50206 3.05463 2.76450 2.74314 2.97461 2.60191 4.47674 3.47706\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.10081 3.94306 2.57042 0.61958 0.77255 0.00000 *\n+ 1 2.35557 4.29472 3.19763 2.84224 3.88559 3.09543 3.91480 3.31420 2.79125 3.04108 3.56516 3.05924 3.73536 3.17891 3.12118 1.44315 2.75694 2.94505 5.27902 3.96543 1 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03136 3.87362 4.59596 0.61958 0.77255 0.54943 0.86104\n+ 2 2.56222 4.93545 2.48547 1.53546 4.24250 3.27700 3.67324 3.58742 2.50194 3.24171 3.90393 2.82409 3.79767 2.83943 2.95126 2.69128 2.96218 3.25991 5.49628 4.12507 2 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03136 3.87362 4.59596 0.61958 0.77255 0.54943 0.86104\n+ 3 2.99070 5.11937 0.91641 2.33541 4.49650 3.21142 3.93186 4.08490 3.01617 3.69299 4.67105 2.89187 3.86428 3.17096 3.53260 2.95288 3.32927 3.72394 5.66490 4.36911 3 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03136 3.87362 4.59596 0.61958 0.77255 0.54943 0.86104\n+ 4 3.15648 4.61836 4.19136 3.83114 3.13602 3.98365 4.48651 2.34004 3.59888 0.87378 3.15847 4.10651 4.41876 3.96694 3.77479 3.55454 3.45065 2.37769 5.01580 3.73941 4 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03136 3.87362 4.59596 0.61958 0.77255 0.54943 0.86104\n+ 5 3.15648 4.61836 4.19136 3.83114 3.13602 3.98365 4.48651 2.34004 3.59888 0.87378 3.15847 4.10651 4.41876 3.96694 3.77479 3.55454 3.45065 2.37769 5.01580 3.73941 5 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03136 3.87362 4.59596 0.61958 0.77255 0.54943 0.86104\n+ 6 2.88150 4.86740 2.90352 2.65818 4.03614 3.36669 3.81653 3.66699 2.47887 3.16924 4.19698 3.11796 3.92011 1.23200 2.76306 2.92916 3.17843 3.39657 5.30791 4.00170 6 q - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03136 3.87362 4.59596 0.61958 0.77255 0.54943 0.86104\n+ 7 2.19930 4.30360 3.15462 2.93901 4.10942 3.03826 4.08460 3.44832 2.99567 3.16960 4.13205 3.22489 1.40669 3.36265 3.'..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03221 3.84729 4.56964 0.61958 0.77255 0.55175 0.85788\n+ 297 2.68949 4.34463 3.62863 3.06645 3.34280 3.69463 3.95942 2.32509 2.93148 1.97487 3.17913 3.45835 4.05972 2.74751 3.24757 2.96678 2.92553 1.91454 4.95587 3.73141 297 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03221 3.84729 4.56964 0.61958 0.77255 0.55175 0.85788\n+ 298 3.03374 4.42596 4.46767 3.93972 3.21929 4.23727 4.62910 1.36024 3.77485 1.69960 2.54182 4.21800 4.53431 4.04124 3.97796 3.59172 3.28311 1.87773 5.17235 3.99921 298 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03221 3.84729 4.56964 0.61958 0.77255 0.55175 0.85788\n+ 299 2.96308 5.08661 0.95484 2.32029 4.46038 3.19207 3.90968 4.04294 2.98917 3.65590 4.63377 2.87526 3.84312 3.14901 3.50171 2.92851 3.30123 3.68492 5.63386 4.33785 299 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03221 3.84729 4.56964 0.61958 0.77255 0.55175 0.85788\n+ 300 2.96308 5.08661 0.95484 2.32029 4.46038 3.19207 3.90968 4.04294 2.98917 3.65590 4.63377 2.87526 3.84312 3.14901 3.50171 2.92851 3.30123 3.68492 5.63386 4.33785 300 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03221 3.84729 4.56964 0.61958 0.77255 0.55175 0.85788\n+ 301 2.86927 5.37796 1.57081 1.58824 4.66400 3.16503 3.70363 4.16174 2.70706 3.69223 4.55352 2.64091 3.78111 2.87391 3.28282 2.76564 3.15740 3.75564 5.85198 4.37248 301 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03221 3.84729 4.56964 0.61958 0.77255 0.55175 0.85788\n+ 302 2.70309 4.69830 2.69534 2.57844 4.05793 3.16750 3.90157 3.76319 2.80333 3.41302 4.36866 1.20343 3.81828 3.17454 3.15690 2.77141 3.08429 3.38794 5.36678 4.00828 302 n - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03221 3.84729 4.56964 0.61958 0.77255 0.55175 0.85788\n+ 303 2.59653 4.29323 4.15219 3.68818 3.52695 3.83220 4.51291 1.88381 3.55248 2.14129 3.39925 3.93128 4.30928 3.88987 3.80505 3.22122 3.08690 1.22269 5.32169 4.08447 303 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03221 3.84729 4.56964 0.61958 0.77255 0.55175 0.85788\n+ 304 2.30315 4.22304 3.18507 3.00000 4.05139 2.95342 4.11039 3.57074 3.07206 3.29304 4.22146 3.22860 3.69021 3.42341 3.35865 1.12966 2.78146 3.11137 5.42596 4.13486 304 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02180 3.83687 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W04UC.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W04UC.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,1129 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W04UC\n+LENG 369\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:07:47 2016\n+NSEQ 42\n+EFFN 0.443481\n+CKSUM 170555600\n+STATS LOCAL MSV -11.2713 0.69978\n+STATS LOCAL VITERBI -12.3283 0.69978\n+STATS LOCAL FORWARD -5.7536 0.69978\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.60051 4.05562 2.90441 2.79768 3.08045 2.77920 3.55934 2.78516 2.81025 2.41855 3.62471 3.09461 3.33994 3.22268 3.06952 2.70345 2.92429 2.55458 4.70343 3.12090\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.04083 3.82855 4.00248 0.61958 0.77255 0.00000 *\n+ 1 2.76756 4.32554 4.05291 3.71545 3.51346 3.66934 4.52645 2.05651 3.58240 2.21023 3.48752 3.91327 4.23345 3.94639 3.79969 3.17043 3.13084 1.09282 5.28881 4.01675 1 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03309 3.82081 4.54315 0.61958 0.77255 0.49248 0.94445\n+ 2 2.25729 4.30656 3.23421 2.78256 3.22793 3.26075 3.79747 2.99870 2.76328 2.72160 3.63924 3.15826 3.79182 3.09658 3.12698 1.86250 2.75869 2.72140 4.99482 3.51028 2 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03309 3.82081 4.54315 0.61958 0.77255 0.49248 0.94445\n+ 3 3.17437 4.68428 3.76277 3.48336 2.29772 3.77057 3.59738 3.19097 3.34237 2.65801 3.87166 3.66117 4.24608 3.66082 3.53629 3.31589 3.46107 3.05922 3.93918 1.05625 3 y - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03309 3.82081 4.54315 0.61958 0.77255 0.49248 0.94445\n+ 4 2.66097 4.42738 3.94606 3.58114 1.47146 3.73176 3.93337 2.54648 3.50029 2.06955 3.35070 3.75822 4.21413 3.74292 3.70618 3.15795 3.18490 2.47569 4.36458 2.79775 4 f - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03309 3.82081 4.54315 0.61958 0.77255 0.49248 0.94445\n+ 5 3.27992 4.66981 4.17848 3.79374 1.73939 4.07994 3.44095 3.05466 3.66683 2.45979 3.69015 3.79922 4.42680 3.79300 3.81949 3.43694 3.51569 2.96273 3.65885 1.24017 5 y - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03309 3.82081 4.54315 0.61958 0.77255 0.49248 0.94445\n+ 6 2.50783 4.06219 2.64489 2.40708 4.03475 3.23700 3.65926 3.46162 2.49744 3.08273 3.91169 2.14579 3.73822 2.77243 2.94060 2.37612 2.79729 3.11075 5.31881 3.98749 6 n - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03309 3.82081 4.54315 0.61958 0.77255 0.49248 0.94445\n+ 7 2.24564 4.39159 2.90457 2.62505 4.04043 2.86201 3.61183 3.48392 2.70096 3.13638 3.99576 3.01901 1.96306 3.06297 3'..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03329 3.81507 4.53741 0.61958 0.77255 0.49740 0.93677\n+ 362 2.89657 4.34002 4.33540 3.86273 3.43409 4.04249 4.64277 1.70131 3.72059 2.00918 3.30382 4.11271 4.45492 4.04177 3.95704 3.43375 3.19082 1.20150 5.32051 4.07504 362 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03329 3.81507 4.53741 0.61958 0.77255 0.49740 0.93677\n+ 363 2.83261 5.18882 2.09783 1.32798 4.49241 3.18246 3.70804 3.95203 2.65147 3.53766 4.42002 2.70351 3.78384 2.88868 3.15837 2.76639 3.12143 3.58451 5.69627 4.28281 363 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03329 3.81507 4.53741 0.61958 0.77255 0.49740 0.93677\n+ 364 2.12952 4.40848 2.93902 2.62267 4.04684 3.11452 3.81059 3.40224 2.49786 3.08898 3.95484 3.02254 2.15104 3.02656 2.99350 2.48412 2.77720 3.02948 5.36130 4.08386 364 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03329 3.81507 4.53741 0.61958 0.77255 0.49740 0.93677\n+ 365 2.22784 4.64487 2.89320 2.45699 4.05088 3.19517 3.64426 3.44617 2.02999 3.06441 3.89730 2.77162 3.41346 2.81515 2.78575 2.59254 2.74884 3.04422 5.30201 3.99898 365 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03329 3.81507 4.53741 0.61958 0.77255 0.49740 0.93677\n+ 366 2.55256 4.59631 2.76318 2.52687 3.90914 3.17834 3.76371 3.46646 2.58622 3.15645 3.85746 1.66698 3.77587 2.99977 2.94417 2.59089 2.90158 3.12277 5.28065 3.87771 366 n - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03329 3.81507 4.53741 0.61958 0.77255 0.49740 0.93677\n+ 367 2.90522 5.00113 2.46727 1.11001 4.34053 3.23867 3.82214 3.78306 2.69558 3.41004 4.38792 2.90405 3.84092 3.03986 3.09745 2.89431 3.20947 3.47334 5.52306 4.24672 367 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03329 3.81507 4.53741 0.61958 0.77255 0.49740 0.93677\n+ 368 3.25513 4.62909 4.23937 3.85121 1.29318 4.09308 3.49584 2.93028 3.72181 2.30942 3.56696 3.84598 4.43324 3.83335 3.85715 3.45289 3.49099 2.86788 3.71009 1.77181 368 f - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03329 3.81507 4.53741 0.61958 0.77255 0.49740 0.93677\n+ 369 3.25721 4.66570 4.13098 3.74599 1.81001 4.05255 3.44699 3.04758 3.61945 2.46129 3.68955 3.77574 4.40704 3.76496 3.78364 3.41279 3.49599 2.95277 3.67635 1.22702 369 y - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02253 3.80431 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W06CL.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W06CL.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,886 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W06CL\n+LENG 288\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:05:51 2016\n+NSEQ 41\n+EFFN 0.858337\n+CKSUM 1720946982\n+STATS LOCAL MSV -10.9811 0.70162\n+STATS LOCAL VITERBI -11.8379 0.70162\n+STATS LOCAL FORWARD -5.5881 0.70162\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.61753 4.04645 3.15863 2.73171 3.16702 3.19559 3.69289 2.64376 2.74411 2.33857 3.58831 3.17207 3.20968 3.10720 3.00118 2.70592 2.76070 2.48372 4.43931 3.42879\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.04574 4.06079 3.59464 0.61958 0.77255 0.00000 *\n+ 1 3.10981 4.63359 4.23476 3.84405 3.29252 3.96224 4.54017 2.48548 3.60195 1.86439 1.08751 4.09974 4.42645 3.97425 3.78680 3.47514 3.41985 2.51057 5.15408 3.92927 1 m - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02645 4.04150 4.76385 0.61958 0.77255 0.50660 0.92266\n+ 2 3.19211 4.51590 4.78050 4.26748 3.05949 4.48093 4.83165 1.07047 4.13244 1.72918 3.17306 4.49829 4.74370 4.34191 4.30224 3.85076 3.43940 1.84939 5.23419 3.97542 2 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02645 4.04150 4.76385 0.61958 0.77255 0.50660 0.92266\n+ 3 2.91714 5.38936 2.11318 1.14636 4.69931 3.25984 3.77880 4.18666 2.74180 3.72557 4.57777 2.74555 3.86482 2.94610 3.28751 2.73065 3.20499 3.78233 5.89247 4.42366 3 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02645 4.04150 4.76385 0.61958 0.77255 0.50660 0.92266\n+ 4 3.03423 4.42875 4.80618 4.28130 3.49737 4.47157 4.96105 1.18069 4.16726 1.83128 3.29963 4.51322 4.74980 4.40543 4.35651 3.83719 3.36939 1.46582 5.45725 4.28251 4 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02645 4.04150 4.76385 0.61958 0.77255 0.50660 0.92266\n+ 5 2.56296 4.77906 2.89850 2.43626 4.04409 3.40031 3.62834 3.37994 2.24585 3.06019 3.87751 2.81546 3.80779 2.74094 2.76577 2.39483 2.14824 3.08322 5.30058 3.97283 5 t - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02645 4.04150 4.76385 0.61958 0.77255 0.50660 0.92266\n+ 6 0.95678 4.20526 3.67847 3.41066 4.09347 3.07992 4.37649 3.13401 3.37735 3.05737 4.07942 3.49944 3.82532 3.70361 3.62925 2.55531 2.82454 2.67221 5.58723 4.35795 6 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02645 4.04150 4.76385 0.61958 0.77255 0.50660 0.92266\n+ 7 2.95841 5.13032 3.22273 2.67758 4.55993 3.58718 3.63425 3.93858 1.20293 3.41027 4.26019 2.94602 3.99001 2.77094 2'..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02513 4.09193 4.81428 0.61958 0.77255 0.50576 0.92394\n+ 281 3.18281 4.46400 4.95398 4.43523 3.54302 4.59037 5.10053 1.19078 4.32711 1.85851 3.33524 4.65262 4.84696 4.55240 4.50242 3.96721 3.43389 1.31901 5.54085 4.36499 283 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02513 4.09193 4.81428 0.61958 0.77255 0.50576 0.92394\n+ 282 2.60692 5.01807 2.94034 2.39203 4.33316 3.42648 3.07643 3.77183 2.02698 3.29410 4.07696 2.70731 3.81977 2.33719 2.51894 2.59697 2.52383 3.39489 5.45443 4.10371 284 k - - -\n+ 2.68614 4.42225 2.77520 2.73123 3.46354 2.40513 3.72495 3.29354 2.67741 2.69355 4.24690 2.90347 2.73740 3.18146 2.89801 2.37887 2.77520 2.98518 4.58477 3.61503\n+ 0.04031 3.46099 4.81428 0.55464 0.85397 0.50576 0.92394\n+ 283 3.24128 4.54389 4.90725 4.39054 3.38468 4.58002 5.02129 1.07847 4.23685 1.58278 3.19896 4.62532 4.82728 4.45924 4.39995 3.95995 3.48982 1.77762 5.42054 4.25040 286 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02513 4.09193 4.81428 0.61958 0.77255 0.50576 0.92394\n+ 284 3.45407 4.84059 4.32542 3.90811 1.84015 4.24835 2.66412 3.40230 3.77598 2.64543 3.97515 3.90240 4.57391 3.89322 3.93864 3.56926 3.67336 3.25812 3.71823 1.04470 287 y - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02513 4.09193 4.81428 0.61958 0.77255 0.50576 0.92394\n+ 285 2.09980 4.29816 3.32746 3.00342 4.30311 3.05112 4.13214 3.70000 3.05959 3.37928 4.20816 3.26123 1.59195 3.37140 3.41124 1.92597 2.66897 3.20150 5.62932 4.38955 288 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02513 4.09193 4.81428 0.61958 0.77255 0.50576 0.92394\n+ 286 1.90896 4.20989 3.54911 3.19585 4.20963 3.03827 4.22013 3.52525 3.19270 3.28184 4.13273 3.36322 3.75956 3.49737 3.50523 2.07725 1.35091 3.06394 5.57967 4.36808 289 t - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02513 4.09193 4.81428 0.61958 0.77255 0.50576 0.92394\n+ 287 2.40894 4.35769 3.40750 2.84606 3.52338 3.54694 3.81847 2.60986 2.79726 2.26730 3.29937 2.67864 3.93761 3.11672 3.16682 2.79476 2.29316 2.48906 4.96665 3.72263 290 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02513 4.09193 4.81428 0.61958 0.77255 0.50576 0.92394\n+ 288 2.43194 4.35496 3.46257 3.01310 3.89035 3.29079 4.03812 2.83216 2.94091 2.85074 3.81103 3.33284 1.58849 3.30077 3.28019 2.66481 2.59961 2.63176 5.33350 4.08739 291 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01699 4.08379 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W06HU.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W06HU.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,1024 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W06HU\n+LENG 334\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:01:40 2016\n+NSEQ 41\n+EFFN 0.663147\n+CKSUM 2945484408\n+STATS LOCAL MSV -10.8149 0.70043\n+STATS LOCAL VITERBI -12.0742 0.70043\n+STATS LOCAL FORWARD -5.4175 0.70043\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.63031 4.47982 2.79854 2.52974 3.24472 3.19301 3.71740 2.84057 2.58980 2.52570 3.68457 3.08117 3.29060 3.05690 2.80023 2.70795 2.87610 2.63826 4.71613 3.25094\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.15217 3.98708 2.09876 0.61958 0.77255 0.00000 *\n+ 1 2.66832 4.35615 3.64662 3.20149 3.36774 3.53917 4.06915 2.59203 3.03439 2.13150 1.72249 3.52005 3.38042 3.42122 3.30239 2.92926 2.97616 2.48604 5.01745 3.78143 1 m - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03159 3.86650 4.58884 0.61958 0.77255 0.59581 0.80099\n+ 2 1.92729 4.24641 3.31164 2.86160 3.84623 3.14054 3.90715 2.95833 2.82152 2.87610 3.77160 3.18542 2.32168 3.16267 3.17665 2.44399 2.71592 2.64738 5.24420 3.99424 2 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03159 3.86650 4.58884 0.61958 0.77255 0.59581 0.80099\n+ 3 2.74355 4.50190 3.35008 3.18824 4.18395 3.18975 4.26620 3.72782 3.24503 3.35531 4.40490 3.49555 0.83881 3.63400 3.49125 2.91085 3.18465 3.37387 5.37215 4.30453 3 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03159 3.86650 4.58884 0.61958 0.77255 0.59581 0.80099\n+ 4 2.40950 4.25456 3.42279 3.17451 3.96360 3.09404 4.19229 3.09000 3.11737 2.95371 4.00461 3.38485 3.79732 3.51249 3.37635 2.61070 1.18207 2.78562 5.40193 4.18023 4 t - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03159 3.86650 4.58884 0.61958 0.77255 0.59581 0.80099\n+ 5 3.00478 4.38062 4.54528 4.05830 3.42418 4.24293 4.79787 1.24775 3.92306 1.93576 3.25876 4.30322 4.59359 4.21091 4.13789 3.63000 3.28001 1.48578 5.37263 4.15888 5 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03159 3.86650 4.58884 0.61958 0.77255 0.52405 0.89678\n+ 6 2.74493 5.11509 2.26624 1.52551 4.37159 3.27806 3.65344 3.82063 2.50850 3.06571 4.21808 2.76627 3.79751 2.73233 2.99730 2.70241 3.00090 3.45979 5.58384 4.17649 6 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03005 3.91569 4.63804 0.61958 0.77255 0.55394 0.85491\n+ 7 2.60258 4.19140 3.19038 2.58983 4.13934 3.46125 3.60690 3.51353 1.81406 3.09578 3.93737 3.04717 3.86196 2.76192 '..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03089 3.88858 4.61093 0.61958 0.77255 0.56841 0.83569\n+ 327 2.48944 4.43102 3.09193 2.75296 3.78634 3.20988 3.59700 3.30513 2.70249 2.95587 3.89188 3.13303 1.75399 3.11415 3.03647 2.62394 2.84808 2.76384 5.19486 3.85305 329 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03089 3.88858 4.61093 0.61958 0.77255 0.56841 0.83569\n+ 328 2.12764 4.42872 3.03425 2.66101 3.92205 3.18896 3.45835 3.34706 2.65613 3.00940 3.88154 3.06641 2.08208 3.03337 3.02585 2.56815 2.79248 2.93121 5.27253 3.97494 330 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03089 3.88858 4.61093 0.61958 0.77255 0.56841 0.83569\n+ 329 2.46471 4.07375 3.06072 2.59933 3.90224 2.11908 3.73240 3.19026 2.56496 2.96251 3.81029 2.73601 3.76490 2.71767 2.95849 2.57287 2.77334 2.97466 5.22900 3.93889 331 g - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03089 3.88858 4.61093 0.61958 0.77255 0.56841 0.83569\n+ 330 2.80101 5.24208 1.97452 1.44647 4.52988 3.21549 3.68531 3.98370 2.61745 3.54603 4.39104 2.70041 3.78984 2.84603 3.15226 2.72956 3.07674 3.44418 5.73437 4.28559 332 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03089 3.88858 4.61093 0.61958 0.77255 0.54797 0.86305\n+ 331 2.83789 5.33712 1.95196 1.41332 4.62636 3.20897 3.68944 4.11192 2.55869 3.63394 4.47043 2.67763 3.79476 2.84863 3.17939 2.67787 3.11334 3.70718 5.80633 4.34010 333 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03047 3.90218 4.62453 0.61958 0.77255 0.55664 0.85128\n+ 332 2.69087 5.21194 1.84664 1.63227 4.50161 3.23437 3.66546 3.75115 2.57386 3.50539 4.33383 2.71405 3.78485 2.81752 3.10594 2.70308 3.03472 3.56132 5.69787 4.25690 334 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03047 3.90218 4.62453 0.61958 0.77255 0.55664 0.85128\n+ 333 2.82042 5.27238 1.96160 1.42217 4.54654 3.22268 3.69152 4.01345 2.62453 3.41485 4.41338 2.70311 3.79827 2.85273 3.15952 2.74403 3.09452 3.62800 5.74655 4.29565 335 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03047 3.90218 4.62453 0.61958 0.77255 0.55664 0.85128\n+ 334 2.64628 5.04557 2.30949 1.54019 4.32335 3.27746 3.65448 3.59114 2.50907 3.22767 4.16828 2.78206 3.79157 2.80941 2.99628 2.68478 2.97214 3.36960 5.55179 4.15383 336 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02061 3.89233 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W06OE.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W06OE.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,1006 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W06OE\n+LENG 328\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:05:48 2016\n+NSEQ 42\n+EFFN 0.515259\n+CKSUM 4035949497\n+STATS LOCAL MSV -11.1747 0.70061\n+STATS LOCAL VITERBI -11.8897 0.70061\n+STATS LOCAL FORWARD -5.4671 0.70061\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.53280 4.21132 2.88026 2.65781 3.29259 2.95408 3.81492 2.77567 2.75151 2.41709 3.65418 3.04753 3.29178 3.11705 2.87688 2.66825 2.87156 2.58939 4.63567 3.47445\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.08261 3.88316 2.83526 0.61958 0.77255 0.00000 *\n+ 1 2.93920 4.49442 4.00763 3.59867 3.19191 3.80484 4.34292 2.36364 3.36868 1.79301 1.45527 3.88084 4.26570 3.75344 3.57850 3.28396 3.24399 2.36507 5.02718 3.78518 1 m - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03268 3.83323 4.55558 0.61958 0.77255 0.52974 0.88858\n+ 2 1.32562 4.08881 3.31778 3.06494 4.10491 2.88832 4.13058 3.39004 3.10682 3.19213 4.07742 3.22812 3.63208 3.42187 3.39859 1.99615 2.65156 2.93336 5.49334 4.26175 2 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03268 3.83323 4.55558 0.61958 0.77255 0.52974 0.88858\n+ 3 3.08726 4.48401 4.48146 3.94881 3.14474 4.28155 4.63760 1.79098 3.78462 1.18394 2.98597 4.24309 4.55760 4.03604 3.98893 3.63294 3.33306 1.88417 5.14300 3.96959 3 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03268 3.83323 4.55558 0.61958 0.77255 0.52974 0.88858\n+ 4 2.91261 5.02058 3.24448 2.65988 4.40325 3.55125 3.55547 3.77445 1.78955 3.25883 4.12780 3.08476 3.93677 2.45174 1.54332 2.91993 3.09507 3.46445 5.35088 4.14913 4 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03268 3.83323 4.55558 0.61958 0.77255 0.52974 0.88858\n+ 5 2.39279 4.23756 3.39442 3.14538 3.93534 3.07793 4.16555 3.05773 3.08757 2.92259 3.97618 3.36061 3.77884 3.48453 3.34775 2.59369 1.24022 2.75691 5.37663 4.15216 5 t - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03268 3.83323 4.55558 0.61958 0.77255 0.52974 0.88858\n+ 6 3.24711 4.68364 4.06653 3.69391 1.93421 4.01960 3.46898 3.07151 3.56283 2.49801 3.72552 3.75491 4.39260 3.74248 3.74010 3.39540 3.49376 2.97063 3.71522 1.16348 6 y - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03268 3.83323 4.55558 0.61958 0.77255 0.52974 0.88858\n+ 7 2.61789 4.39646 3.28355 3.17836 4.31997 0.79231 4.30043 3.91061 3.35422 3.56954 4.54548 3.44802 3.78633 3.68159 '..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03337 3.81249 4.53483 0.61958 0.77255 0.54684 0.86459\n+ 321 2.94005 4.78087 3.42481 2.95019 4.12027 3.43787 3.78477 3.65890 2.21901 3.18587 4.18887 3.31389 3.94450 3.00918 1.07425 3.02785 3.21084 3.38576 5.22841 4.06193 323 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03337 3.81249 4.53483 0.61958 0.77255 0.54684 0.86459\n+ 322 2.78150 4.36743 3.80905 3.15743 3.24953 3.79043 4.11700 2.18465 3.10360 1.91677 1.96643 3.64133 4.16808 3.47401 3.37107 3.11257 3.03242 2.21898 4.97925 3.76254 324 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03337 3.81249 4.53483 0.61958 0.77255 0.54684 0.86459\n+ 323 2.88081 4.86310 3.27884 2.75819 4.03236 3.49009 3.37723 3.66585 2.03082 3.17179 4.09580 3.15414 3.93349 2.81824 1.35806 2.92933 3.10723 3.37348 5.18398 3.90214 325 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03337 3.81249 4.53483 0.61958 0.77255 0.54684 0.86459\n+ 324 2.87740 4.86209 3.21296 2.62034 4.22148 3.46288 3.65494 3.64103 2.06161 3.18870 4.11769 3.14358 3.92284 2.83482 1.33342 2.92717 3.11194 3.35014 5.29589 4.08996 326 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03337 3.81249 4.53483 0.61958 0.77255 0.53183 0.88559\n+ 325 3.08478 4.55133 4.27027 3.81128 3.05380 4.11507 4.47013 2.08774 3.56432 1.04741 3.01389 4.09739 4.46780 3.90699 3.76348 3.52472 3.35429 2.17353 5.00429 3.72314 327 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03301 3.82325 4.54560 0.61958 0.77255 0.53805 0.87680\n+ 326 1.34269 4.19846 3.47430 3.14345 3.40325 3.13812 4.10996 2.81685 3.11878 2.67982 3.75194 3.36541 3.80337 3.45073 3.41033 2.58669 2.79414 2.56102 5.21829 3.91412 328 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03301 3.82325 4.54560 0.61958 0.77255 0.53805 0.87680\n+ 327 2.55893 4.62827 2.60101 2.46693 4.08551 3.09997 3.81758 3.71165 2.69548 3.36926 4.26923 1.51117 3.75254 3.05656 3.07077 2.52248 2.94259 3.30516 5.42443 4.01949 329 n - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03301 3.82325 4.54560 0.61958 0.77255 0.53805 0.87680\n+ 328 2.39904 4.28648 3.26107 2.93909 3.90566 3.11537 3.97581 3.14500 2.79431 2.92252 3.90231 3.22946 3.76496 3.24867 2.91649 2.57341 1.47200 2.83062 5.30729 4.05471 330 t - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02234 3.81258 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W07NX.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W07NX.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,766 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W07NX\n+LENG 248\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:06:01 2016\n+NSEQ 41\n+EFFN 0.573059\n+CKSUM 3514167566\n+STATS LOCAL MSV -10.8240 0.70299\n+STATS LOCAL VITERBI -11.6806 0.70299\n+STATS LOCAL FORWARD -5.0886 0.70299\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.60313 4.37196 3.01014 2.72928 3.10909 2.88768 3.58848 2.82785 2.74596 2.41420 3.69554 3.21181 3.31694 3.12638 2.84641 2.67578 2.83774 2.58052 4.29270 3.27269\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03992 3.92507 3.94280 0.61958 0.77255 0.00000 *\n+ 1 2.91061 5.00125 3.38240 2.72048 4.36052 3.59601 3.58290 3.56424 1.65099 3.16294 4.10010 3.13741 3.96454 2.72738 1.55148 2.93085 3.09333 3.41531 5.34487 4.13946 1 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03006 3.91522 4.63756 0.61958 0.77255 0.47993 0.96450\n+ 2 3.19055 4.61459 4.46602 3.98945 3.07618 4.27425 4.61488 2.07550 3.74977 0.93264 2.99065 4.26791 4.58510 4.04956 3.93075 3.67699 3.44957 2.20665 5.07680 3.83710 2 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02977 3.92507 4.64742 0.61958 0.77255 0.48576 0.95510\n+ 3 1.55569 4.25328 3.77152 3.30242 3.63320 3.45289 4.21115 2.14909 3.21200 2.43569 3.54099 3.56406 4.01341 3.54065 3.51029 2.83185 2.89773 2.07150 5.24671 4.01545 3 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02977 3.92507 4.64742 0.61958 0.77255 0.48576 0.95510\n+ 4 2.74672 4.96378 2.50073 1.38447 4.35527 3.26183 3.75089 3.68038 2.58355 3.34495 4.24013 2.85545 3.82985 2.92714 3.01508 2.74691 2.63171 3.34490 5.59986 4.23534 4 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02977 3.92507 4.64742 0.61958 0.77255 0.48576 0.95510\n+ 5 2.92753 4.37606 4.35966 3.85886 3.39618 4.06680 4.60027 1.93543 3.70358 1.96609 2.78599 4.11245 4.45792 4.00952 3.92947 3.43920 3.20915 1.17812 5.26334 4.05100 5 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02977 3.92507 4.64742 0.61958 0.77255 0.48576 0.95510\n+ 6 1.96352 4.20608 3.21750 3.05023 4.31965 1.24616 4.21510 3.69015 3.20854 3.43261 4.30821 3.25514 3.69174 3.50237 3.50919 2.44427 2.76621 3.17192 5.64406 4.43956 6 g - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02977 3.92507 4.64742 0.61958 0.77255 0.48576 0.95510\n+ 7 2.89161 5.08227 3.18026 2.61094 4.48827 3.54332 3.57708 3.86753 1.55425 3.34199 4.18492 2.69780 3.93299 2.71081 1'..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03028 3.90810 4.63044 0.61958 0.77255 0.49268 0.94414\n+ 241 2.79843 4.55009 3.40941 3.25341 4.24591 3.23557 4.32812 3.80026 3.31372 3.42333 4.47455 3.55663 0.76399 3.70142 3.55540 2.96699 3.24275 3.44160 5.42291 4.36699 245 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03028 3.90810 4.63044 0.61958 0.77255 0.49268 0.94414\n+ 242 2.79843 4.55009 3.40941 3.25341 4.24591 3.23557 4.32812 3.80026 3.31372 3.42333 4.47455 3.55663 0.76399 3.70142 3.55540 2.96699 3.24275 3.44160 5.42291 4.36699 246 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03028 3.90810 4.63044 0.61958 0.77255 0.49268 0.94414\n+ 243 3.30348 4.69474 4.28756 4.00868 0.95519 3.98521 3.89275 2.82262 3.91477 2.18439 3.54741 4.05923 4.44289 4.07290 4.02571 3.57168 3.60457 2.81596 4.13100 2.49344 247 f - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03028 3.90810 4.63044 0.61958 0.77255 0.49268 0.94414\n+ 244 2.07430 4.17351 3.24977 3.03077 4.19574 2.92555 4.14861 3.57668 3.10417 3.32498 4.20575 3.22863 3.67255 3.42932 3.40523 1.19096 2.71628 3.08462 5.56731 4.30854 248 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03028 3.90810 4.63044 0.61958 0.77255 0.49268 0.94414\n+ 245 3.19505 4.64665 4.24672 3.88655 3.14904 4.02747 4.53110 2.35484 3.65395 0.83256 3.16054 4.15859 4.45658 4.01376 3.82427 3.60222 3.48761 2.40145 5.04145 3.77305 249 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03028 3.90810 4.63044 0.61958 0.77255 0.49268 0.94414\n+ 246 2.98262 5.10141 2.50220 0.97579 4.45204 3.29680 3.88643 3.91300 2.77142 3.52431 4.49656 2.95270 3.90301 3.10122 3.18410 2.96127 3.28706 3.59309 5.61690 4.33892 250 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03028 3.90810 4.63044 0.61958 0.77255 0.49268 0.94414\n+ 247 2.33232 4.25329 3.23715 3.05436 4.11166 2.98250 4.16333 3.63899 3.13052 3.35640 4.27938 3.27359 3.72420 3.47702 3.41561 1.03861 2.81508 3.16630 5.48126 4.19532 251 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03028 3.90810 4.63044 0.61958 0.77255 0.49268 0.94414\n+ 248 2.59291 4.86673 3.04888 2.65111 4.31784 3.41353 3.70234 3.63149 1.28118 3.24824 4.16102 3.08654 3.90981 2.87081 2.43884 2.84731 3.06866 3.31808 5.42867 4.18251 252 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02048 3.89830 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W08R7.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W08R7.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,1048 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W08R7\n+LENG 342\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:10:44 2016\n+NSEQ 42\n+EFFN 1.653442\n+CKSUM 4217172673\n+STATS LOCAL MSV -11.2894 0.70029\n+STATS LOCAL VITERBI -11.9277 0.70029\n+STATS LOCAL FORWARD -5.5782 0.70029\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.52492 3.93388 3.08871 2.69483 3.37394 2.92621 3.80731 2.70456 2.60624 2.45509 3.58533 3.05410 3.44016 3.13165 2.97679 2.71989 2.79768 2.54632 4.49833 3.41916\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.32000 4.47246 1.33775 0.61958 0.77255 0.00000 *\n+ 1 2.94737 4.59816 3.79259 3.35043 3.39494 3.82862 4.17955 2.73344 3.06267 2.10634 1.28051 3.69552 4.25919 3.06063 3.30313 3.21115 3.21519 2.69741 5.09529 3.84607 1 m - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02309 4.17555 4.89789 0.61958 0.77255 0.78841 0.60618\n+ 2 1.95856 4.83771 3.00999 2.23743 4.09098 3.26112 3.65209 3.50761 2.42840 3.01936 3.61284 2.97907 3.84159 2.71026 2.53436 2.52399 2.86144 3.18000 5.34007 4.00674 2 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02248 4.20238 4.92473 0.61958 0.77255 0.72507 0.66221\n+ 3 2.64685 4.62987 3.21260 2.64391 3.20319 3.52677 3.73231 3.19154 1.89304 2.73024 3.28907 3.12453 3.91047 2.93873 2.47788 2.74981 2.71814 2.76897 5.16338 3.88140 3 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02145 4.24837 4.97072 0.61958 0.77255 0.66538 0.72171\n+ 4 2.59540 4.14349 4.09038 3.50634 3.25820 3.76877 4.07471 1.76511 3.16924 2.20692 2.89178 3.73286 4.13615 3.62029 3.38263 2.85035 2.89615 1.85980 4.77968 3.58563 4 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02036 4.30007 5.02242 0.61958 0.77255 0.57784 0.82350\n+ 5 2.40171 4.14296 4.29818 3.70976 3.24321 3.84447 4.16765 1.87485 3.57250 1.86168 2.58783 3.87325 3.65966 3.77483 3.71668 2.99972 2.94107 1.99800 4.79023 3.60498 5 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01907 4.36485 5.08719 0.61958 0.77255 0.64255 0.74644\n+ 6 2.68244 5.09684 2.86431 2.40714 4.41275 3.46210 3.64474 3.62009 1.79220 3.20869 4.14851 2.31368 3.85497 2.68109 2.58630 2.54795 2.70916 3.47238 5.54316 4.16315 6 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01907 4.36485 5.08719 0.61958 0.77255 0.58589 0.81331\n+ 7 2.51351 4.09196 4.28340 3.68888 2.18693 3.78520 4.09958 2.36237 3.54158 1.94491 3.02368 3.52894 4.15208 3.73439 '..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01857 4.39113 5.11348 0.61958 0.77255 0.62444 0.76693\n+ 335 2.54168 4.43326 3.70105 3.37276 4.24265 3.29361 4.38353 3.50559 3.34625 3.30877 4.22554 3.56791 1.03537 3.68229 3.64261 2.51985 2.99128 2.41738 5.66446 4.42056 341 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01857 4.39113 5.11348 0.61958 0.77255 0.62444 0.76693\n+ 336 2.90806 5.30009 3.12274 2.44681 4.69330 3.60571 3.70129 4.11898 1.64699 3.56708 4.35386 1.97253 3.99565 2.56063 2.10091 2.87138 3.11507 3.72225 5.65220 4.34017 342 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01857 4.39113 5.11348 0.61958 0.77255 0.62444 0.76693\n+ 337 2.02634 4.41061 3.07357 2.28466 4.09454 3.49812 3.70301 3.30049 2.36604 2.95220 3.92988 2.96758 3.88855 2.85519 2.65799 2.19494 2.89750 3.09478 5.36176 4.02984 343 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01857 4.39113 5.11348 0.61958 0.77255 0.62444 0.76693\n+ 338 2.64769 4.36413 4.29826 2.91236 3.57743 4.09194 4.45494 1.50780 3.65512 2.36346 3.49273 4.02428 4.44479 3.92457 3.89671 3.39592 3.16022 1.38233 5.20426 3.99587 344 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01857 4.39113 5.11348 0.61958 0.77255 0.62444 0.76693\n+ 339 2.75239 5.18760 2.97323 2.30107 4.53049 3.49801 3.66767 3.98771 1.59116 3.47522 4.23945 2.50058 3.89653 2.67585 2.58444 2.41672 2.76005 3.57938 5.60679 4.23546 345 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01857 4.39113 5.11348 0.61958 0.77255 0.62444 0.76693\n+ 340 2.70660 4.12566 4.37982 3.78533 2.83089 3.85178 4.17324 2.14750 3.63287 1.97313 2.58658 3.91128 3.19599 3.81652 3.74557 2.96980 2.93908 1.70721 4.75725 3.57626 346 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01857 4.39113 5.11348 0.61958 0.77255 0.62444 0.76693\n+ 341 3.32293 4.78756 4.34495 3.86901 0.91299 4.21403 3.82304 3.23246 3.61634 2.71670 3.83904 3.98140 4.56913 3.89721 2.72889 3.54226 3.55340 3.09892 4.15054 2.33505 347 f - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01857 4.39113 5.11348 0.61958 0.77255 0.62444 0.76693\n+ 342 2.61106 1.60800 3.84637 3.30444 3.51845 3.56943 4.07660 2.85126 3.20483 2.60135 3.50967 3.57647 4.04954 3.28050 3.47821 2.50116 2.64374 2.41911 4.99322 3.56723 348 c - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01254 4.38510 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W09HB.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W09HB.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,1360 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W09HB\n+LENG 446\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:05:17 2016\n+NSEQ 41\n+EFFN 1.053528\n+CKSUM 3267506956\n+STATS LOCAL MSV -11.6146 0.69862\n+STATS LOCAL VITERBI -12.6740 0.69862\n+STATS LOCAL FORWARD -5.9898 0.69862\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.56368 4.04930 3.03333 2.66716 3.18413 3.09109 3.74873 2.91459 2.61734 2.36754 3.61990 3.07269 3.26390 3.02405 2.88886 2.60366 2.78703 2.72775 4.37673 3.59396\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.10450 4.19352 2.47539 0.61958 0.77255 0.00000 *\n+ 1 2.45739 4.70808 3.03798 2.49387 3.97066 3.26831 3.66445 3.23724 2.42950 3.00032 3.67881 2.92525 2.76408 2.72664 2.92731 2.18245 2.65608 3.06395 5.26268 3.94587 1 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02459 4.11361 4.83595 0.61958 0.77255 0.56130 0.84505\n+ 2 2.48116 4.63798 3.09550 2.48994 3.63514 3.35405 3.67547 3.23624 2.45404 2.64950 3.56764 2.95745 3.00611 2.81078 2.96145 2.22041 2.73603 2.90997 5.17279 3.87244 2 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02437 4.12251 4.84485 0.61958 0.77255 0.56853 0.83553\n+ 3 2.53236 4.44644 2.73806 2.12571 4.34185 3.38401 3.58324 3.80335 2.07854 3.32138 4.08378 2.75333 3.21591 2.45440 2.81723 2.46445 2.79525 3.40369 5.48525 4.09670 3 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02437 4.12251 4.84485 0.61958 0.77255 0.56853 0.83553\n+ 4 3.56372 4.87554 4.60171 4.24427 1.92519 4.31595 3.67473 3.25223 4.03522 2.57067 3.85027 4.12940 4.67144 4.13520 4.11408 3.74416 3.80605 3.20187 1.07833 2.15042 4 w - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02437 4.12251 4.84485 0.61958 0.77255 0.56853 0.83553\n+ 5 2.64955 4.75457 3.11163 2.54345 3.99005 3.47812 3.41902 3.21244 1.71999 3.00282 3.42181 3.03714 3.86694 2.82786 2.77577 2.65630 2.48681 3.08332 5.25679 3.95749 5 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02437 4.12251 4.84485 0.61958 0.77255 0.56853 0.83553\n+ 6 2.67238 4.95114 2.94097 2.45189 4.24270 3.45909 3.06311 3.66505 2.04275 3.15247 3.70205 2.96566 3.84436 2.73996 2.00934 2.67805 2.63896 3.31531 5.39873 4.07013 6 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02437 4.12251 4.84485 0.61958 0.77255 0.56853 0.83553\n+ 7 3.11874 4.82639 3.75407 3.63445 4.59623 3.50012 4.68503 4.21414 3.71480 3.81033 4.87559 3.91260 0.47107 4.09566 '..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.29826 4.17824 1.41648 0.61958 0.77255 0.51853 0.90485\n+ 439 2.71317 5.17837 2.12661 1.72660 4.48078 3.12730 3.62240 3.95802 2.47507 3.47146 4.26714 2.59302 3.36837 2.75839 2.82515 2.65525 2.96686 3.55327 5.63991 4.21220 445 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03022 3.91020 4.63255 0.61958 0.77255 0.74538 0.64351\n+ 440 2.43687 4.86368 2.56020 2.26004 4.12815 3.16127 3.45102 3.37099 2.28929 3.13372 3.92928 2.75206 3.75946 2.64524 2.82944 2.50947 2.73664 3.21082 5.34709 3.65771 446 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.14065 3.92430 2.19415 0.61958 0.77255 0.42615 1.05849\n+ 441 2.73257 5.19884 2.15142 2.15076 4.51119 2.39160 3.65443 3.98821 2.12350 3.49709 4.28293 2.61776 3.81081 2.78401 2.99650 2.49130 2.98275 3.57877 5.66040 4.23773 447 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02588 4.06305 4.78540 0.61958 0.77255 0.44299 1.02754\n+ 442 2.58771 4.44266 3.31964 2.76846 3.65070 2.48223 3.79492 2.91935 2.59757 2.24130 3.58545 3.20662 3.91059 3.05699 3.10977 2.54952 2.40790 2.65204 5.05296 3.79630 448 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02303 4.17824 4.90059 0.61958 0.77255 0.51853 0.90485\n+ 443 3.55236 4.84250 4.67005 4.28681 1.70659 4.40531 3.63578 2.85488 4.13319 2.60292 3.83851 4.13391 4.71335 4.15102 4.19902 3.74896 3.77447 3.12220 3.80340 0.96103 449 y - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02303 4.17824 4.90059 0.61958 0.77255 0.51853 0.90485\n+ 444 2.33172 4.35038 3.43320 2.87080 3.50811 3.55252 3.82390 2.61466 2.82280 2.50309 3.36514 3.15222 3.94400 3.13604 3.18607 2.59335 1.98780 2.62172 4.94447 3.40884 450 t - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02303 4.17824 4.90059 0.61958 0.77255 0.51853 0.90485\n+ 445 2.68805 3.53973 4.10372 3.53213 2.79165 3.76713 3.92992 2.59544 3.40480 2.09680 3.25747 3.71853 3.67445 3.61835 3.58368 3.05718 2.92030 2.41268 2.00974 2.89681 451 w - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.05871 4.17824 3.17734 0.61958 0.77255 0.51853 0.90485\n+ 446 2.59405 4.40351 3.35451 2.70444 3.18347 3.52987 3.79583 2.79753 2.75360 2.51202 3.39181 3.23151 3.92449 3.07835 3.13395 1.83245 2.67484 2.65821 4.98899 3.73249 452 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01612 4.13565 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W0CIU.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W0CIU.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,616 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W0CIU\n+LENG 198\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:07:10 2016\n+NSEQ 42\n+EFFN 0.730591\n+CKSUM 142938255\n+STATS LOCAL MSV -10.2781 0.70546\n+STATS LOCAL VITERBI -11.1685 0.70546\n+STATS LOCAL FORWARD -5.0749 0.70546\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.51868 4.31129 2.87345 2.82349 3.26011 2.81771 3.86625 2.70631 2.74327 2.39929 3.56532 3.13425 3.49021 3.14788 2.96117 2.71678 2.84342 2.54373 4.57683 3.24577\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.05525 4.03111 3.32441 0.61958 0.77255 0.00000 *\n+ 1 2.59649 4.55704 3.14375 2.66458 3.77503 3.40350 3.73846 3.21645 2.53784 2.87305 3.45517 3.00726 1.91835 2.96654 2.81461 2.70946 2.86693 2.93702 5.14022 3.68947 1 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02749 4.00336 4.72570 0.61958 0.77255 0.51463 0.91060\n+ 2 2.01091 4.44307 3.13629 2.66223 3.71241 3.39093 3.73748 3.08093 2.63970 2.76757 3.50355 3.10925 3.66140 2.97104 3.04765 2.32517 2.49759 2.71625 5.08960 3.58857 2 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02749 4.00336 4.72570 0.61958 0.77255 0.51463 0.91060\n+ 3 2.61552 4.64353 3.03862 2.57569 3.68732 3.40128 3.70728 3.30034 2.33344 2.93717 3.81276 3.04805 2.01807 2.79343 2.86272 2.70017 2.87510 2.92443 5.21747 3.91269 3 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02749 4.00336 4.72570 0.61958 0.77255 0.51463 0.91060\n+ 4 2.60521 4.68297 2.88485 2.45376 3.87210 1.82198 3.73021 3.46730 2.43809 3.09605 3.94169 2.99439 3.82606 2.91880 2.81058 2.55253 2.88932 3.13762 5.34291 4.03687 4 g - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02749 4.00336 4.72570 0.61958 0.77255 0.48363 0.95853\n+ 5 2.16537 4.43133 3.10013 2.49492 3.78133 3.14250 3.66442 3.09252 2.44721 2.69628 3.67382 3.03357 3.83053 2.69080 2.94712 2.41520 2.80036 2.85763 5.12375 3.65546 5 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02698 4.02180 4.74415 0.61958 0.77255 0.49563 0.93953\n+ 6 2.53482 4.12300 3.83807 3.26464 2.18762 3.64942 3.92633 2.29819 3.04465 2.11344 3.15043 3.44677 4.02244 3.42228 3.40095 2.80052 2.81995 2.31604 4.69916 3.46484 6 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02698 4.02180 4.74415 0.61958 0.77255 0.49563 0.93953\n+ 7 2.65505 4.49269 3.09179 2.74683 3.29007 3.52082 3.39201 3.04710 2.71579 2.64994 3.61415 3.18329 3.93169 3.06001 3.'..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02697 4.02222 4.74456 0.61958 0.77255 0.49519 0.94021\n+ 191 2.92056 5.07756 3.25412 2.67062 4.45664 3.58737 3.61992 3.82967 1.25477 3.32227 4.17823 3.11461 3.97419 2.58835 2.16239 2.92413 3.11266 3.30103 5.43051 4.20491 192 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02697 4.02222 4.74456 0.61958 0.77255 0.49519 0.94021\n+ 192 3.06698 4.52713 4.14063 3.66583 1.94845 3.99127 3.61576 2.80455 3.55006 2.53083 3.61867 3.77333 4.34743 3.72427 3.74135 3.01456 3.30113 2.81075 3.92855 1.31645 193 y - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02697 4.02222 4.74456 0.61958 0.77255 0.49519 0.94021\n+ 193 2.63860 4.91892 2.92055 2.32859 4.20337 3.40896 3.12510 3.63078 2.30023 3.12950 3.99053 2.91825 3.81006 2.16634 2.58614 2.38629 2.64225 3.28093 5.38255 4.04335 194 q - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02697 4.02222 4.74456 0.61958 0.77255 0.49519 0.94021\n+ 194 2.82259 4.31452 4.08812 3.52178 3.26204 3.93631 4.23799 1.81001 3.39147 1.64640 3.15772 3.82782 4.27092 3.07808 3.63410 3.23041 3.05658 1.88543 4.97280 3.79173 195 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02697 4.02222 4.74456 0.61958 0.77255 0.49519 0.94021\n+ 195 1.58287 4.23369 3.44857 3.02656 3.98521 1.99999 4.05401 2.99575 3.00919 3.04267 3.91498 3.28528 3.76589 3.32422 3.35106 2.46632 2.74283 2.81084 5.37632 4.14157 196 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02697 4.02222 4.74456 0.61958 0.77255 0.49519 0.94021\n+ 196 2.68076 3.95473 4.08999 3.52487 3.18284 3.80551 4.18065 1.71848 3.42516 2.27459 3.29023 3.60454 4.18396 3.67723 3.65230 3.10769 2.47583 1.70924 4.91875 3.71367 197 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02697 4.02222 4.74456 0.61958 0.77255 0.49519 0.94021\n+ 197 2.78271 2.90307 4.43002 3.87365 3.38841 3.97990 4.42976 1.51414 3.74808 2.15786 3.30870 4.04835 4.35206 3.98009 3.92014 3.19186 3.03944 1.58417 5.05278 3.85391 198 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02697 4.02222 4.74456 0.61958 0.77255 0.49519 0.94021\n+ 198 2.55725 4.62987 2.71205 2.51565 3.95402 3.34864 3.70795 3.33905 2.55608 2.99389 3.47560 2.85775 3.81155 2.89435 2.99346 2.49903 1.87947 3.02456 5.27005 3.96094 199 t - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01824 4.01348 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W0DGR.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W0DGR.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,385 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W0DGR\n+LENG 121\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:12:24 2016\n+NSEQ 42\n+EFFN 0.725464\n+CKSUM 3354938972\n+STATS LOCAL MSV -10.0588 0.71332\n+STATS LOCAL VITERBI -10.7388 0.71332\n+STATS LOCAL FORWARD -4.5657 0.71332\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.52207 3.51288 2.81360 2.60860 3.34142 3.02217 3.62540 3.04280 2.70386 2.56694 3.62701 2.94579 3.03764 2.98608 2.96621 2.63768 2.89749 2.84438 4.89704 3.41984\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.11954 4.02783 2.35540 0.61958 0.77255 0.00000 *\n+ 1 2.65331 5.00898 2.89391 2.27962 4.33758 3.41587 3.57529 3.75739 1.72526 3.27773 4.08300 2.84891 3.56748 2.61259 2.40483 2.55683 2.92465 3.39697 5.43007 4.11005 1 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02939 3.93768 4.66003 0.61958 0.77255 0.57373 0.82879\n+ 2 2.53258 5.08487 2.08533 1.92241 4.37375 3.30043 3.60275 3.83751 2.38455 3.36693 4.15620 2.67464 3.62249 2.73353 2.87132 2.62614 2.90854 3.44816 5.54556 3.75527 2 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02939 3.93768 4.66003 0.61958 0.77255 0.57373 0.82879\n+ 3 2.47034 4.86035 2.63913 2.33716 3.97030 3.35806 3.06277 3.55863 2.36332 2.97145 3.93068 2.63258 3.66450 2.56928 2.83518 2.41873 2.80878 3.20939 5.34629 3.98836 3 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02939 3.93768 4.66003 0.61958 0.77255 0.55713 0.85063\n+ 4 2.43548 4.08224 3.77751 3.19972 2.65453 3.45835 3.88215 2.32144 3.10698 2.09444 2.93860 3.39762 3.83479 3.36440 3.26132 2.87181 2.76896 2.32601 4.67964 3.31640 4 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02908 3.94819 4.67054 0.61958 0.77255 0.56425 0.84115\n+ 5 2.82884 4.29235 4.18793 3.61335 2.59237 3.93445 4.15599 2.38262 3.49407 1.29632 2.79438 3.86557 3.95649 3.69873 3.68882 3.22851 3.05586 2.32316 4.39923 3.47777 5 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02908 3.94819 4.67054 0.61958 0.77255 0.56425 0.84115\n+ 6 2.32639 4.47223 3.15557 2.60774 3.73334 3.06450 3.69701 3.11895 2.57331 2.74425 3.64089 3.00487 3.69817 2.91639 2.87906 2.29881 2.41427 2.77872 4.63994 3.81678 6 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02908 3.94819 4.67054 0.61958 0.77255 0.56425 0.84115\n+ 7 2.57770 5.20400 1.64260 2.03987 4.51907 2.95830 3.67148 3.99452 2.57366 3.52151 4.33336 2.61377 3.79093 2.81945 3'..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02894 3.95264 4.67499 0.61958 0.77255 0.53716 0.87805\n+ 114 0.90415 4.23307 3.54480 3.34014 4.13296 3.05539 4.35261 3.27054 3.35848 3.14842 4.17173 3.46923 3.80222 3.69237 3.60328 2.58282 2.86574 2.91108 5.55212 4.36137 115 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02894 3.95264 4.67499 0.61958 0.77255 0.53716 0.87805\n+ 115 1.08261 4.19026 3.39990 3.13922 4.15938 2.99391 4.20247 3.42325 3.17224 3.20871 4.12431 3.31923 3.10912 3.49438 3.46395 2.46913 2.75673 2.99602 5.54311 4.33231 116 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02894 3.95264 4.67499 0.61958 0.77255 0.53716 0.87805\n+ 116 2.82230 4.92162 3.03147 2.63711 4.37380 3.42480 3.69502 3.77850 1.24216 3.34242 4.22303 3.07728 3.91920 2.85965 2.42397 2.62099 3.08554 3.43663 5.45261 4.19230 117 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02894 3.95264 4.67499 0.61958 0.77255 0.53716 0.87805\n+ 117 2.89466 5.03468 2.96803 2.59328 4.43201 3.45847 3.67128 3.86994 1.22133 3.39743 4.27163 2.77155 3.93628 2.83066 2.38627 2.90015 3.13379 3.52910 5.46858 4.20505 118 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02894 3.95264 4.67499 0.61958 0.77255 0.53716 0.87805\n+ 118 2.76666 4.53390 3.45683 3.36654 4.50690 0.61547 4.48170 4.12623 3.55870 3.77025 4.74682 3.62114 3.92761 3.87653 3.78573 2.94091 3.25414 3.63908 5.58066 4.61159 119 G - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.06439 3.95264 3.14296 0.61958 0.77255 0.53716 0.87805\n+ 119 2.56577 4.17005 3.75002 3.18623 2.67213 3.64845 3.87861 2.07722 3.09725 2.12264 3.23374 3.00514 4.01786 3.36818 3.36791 2.92234 2.83802 2.32458 4.65562 3.18611 120 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02997 3.91822 4.64057 0.61958 0.77255 0.56846 0.83563\n+ 120 2.60272 4.90870 2.55628 2.29833 4.16723 3.34910 3.09972 3.61810 2.35206 3.11146 3.72635 2.23372 3.76930 2.71577 2.74715 2.60111 2.83744 3.26317 5.37679 4.01107 121 n - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02997 3.91822 4.64057 0.61958 0.77255 0.56846 0.83563\n+ 121 2.83428 4.29755 4.18215 3.65057 3.41210 3.98146 4.39800 1.86586 3.51278 1.95477 3.32813 3.73841 4.35439 3.82652 3.76267 3.31309 3.09497 1.30538 5.14502 3.90194 122 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02027 3.90853 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W0E07.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W0E07.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,697 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W0E07\n+LENG 225\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:09:23 2016\n+NSEQ 41\n+EFFN 1.113586\n+CKSUM 4294424761\n+STATS LOCAL MSV -10.5468 0.70398\n+STATS LOCAL VITERBI -11.2573 0.70398\n+STATS LOCAL FORWARD -5.0856 0.70398\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.45272 4.46999 3.02627 2.57319 3.22427 3.03909 3.79627 2.72588 2.69524 2.27846 3.63709 3.05164 3.75549 3.07294 2.92976 2.69253 2.86896 2.63954 4.74934 3.47638\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.05069 4.24993 3.34771 0.61958 0.77255 0.00000 *\n+ 1 2.67882 4.37879 3.84649 3.26983 3.34826 3.79752 4.04932 2.52597 3.06209 1.28206 3.17054 3.61475 4.15665 3.05737 3.16031 3.07810 3.00890 2.52314 4.94525 3.75069 1 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02205 4.22128 4.94363 0.61958 0.77255 0.52268 0.89876\n+ 2 2.56536 4.53061 3.28372 2.71490 3.31223 3.54306 3.76108 2.76955 2.22708 2.73399 3.15028 3.17722 3.92508 2.99924 2.17317 2.77240 2.86390 2.67589 5.08227 3.81710 2 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02205 4.22128 4.94363 0.61958 0.77255 0.52268 0.89876\n+ 3 2.41694 4.85632 2.94373 1.58521 4.13579 3.43723 3.70106 3.36476 2.49838 3.14341 3.96993 2.98986 3.86489 2.77939 2.95041 2.61507 2.90597 2.83798 5.39777 4.06108 3 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02205 4.22128 4.94363 0.61958 0.77255 0.49622 0.93860\n+ 4 3.46563 4.74660 5.19748 4.62125 2.81262 4.76839 5.04801 1.80666 4.49433 0.83607 2.66085 4.83692 4.90066 4.50099 4.54354 4.12216 3.67824 2.38393 5.24347 4.19955 4 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02177 4.23395 4.95629 0.61958 0.77255 0.50666 0.92257\n+ 5 2.52146 4.94408 2.98452 2.36843 3.87765 3.44665 3.63256 3.65211 1.87213 3.21446 4.00633 2.81898 3.83691 2.68686 2.52686 2.65043 2.46525 3.29742 5.41608 3.69015 5 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02177 4.23395 4.95629 0.61958 0.77255 0.50666 0.92257\n+ 6 2.64041 5.15204 3.20146 2.59622 4.52222 3.58776 3.14982 3.92487 1.75322 3.40947 4.21726 3.08216 3.96316 2.69929 1.66544 2.64765 3.06400 3.56415 5.51973 4.23988 6 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02177 4.23395 4.95629 0.61958 0.77255 0.50666 0.92257\n+ 7 3.21371 5.26061 3.73722 3.00198 4.69062 3.82782 3.72798 4.03120 1.78535 3.25344 4.37372 3.37128 4.18373 2.86866 0'..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02204 4.22165 4.94400 0.61958 0.77255 0.52222 0.89944\n+ 218 2.60154 3.59028 3.88388 3.30300 3.24333 3.67133 3.61941 2.35999 3.01892 1.80967 3.00010 3.57898 4.04331 3.45565 2.88406 2.84816 2.83334 2.29177 4.34271 3.53723 221 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02204 4.22165 4.94400 0.61958 0.77255 0.52222 0.89944\n+ 219 3.02941 5.62951 1.16269 2.09214 4.92017 3.33175 3.85192 4.44449 2.74495 3.92471 4.75911 2.21109 3.94173 3.01048 3.44682 2.71790 3.31235 4.00539 6.08202 4.56986 222 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02204 4.22165 4.94400 0.61958 0.77255 0.52222 0.89944\n+ 220 1.43850 3.65193 3.77347 3.25641 3.70208 3.16318 4.11039 2.86659 3.19199 2.77110 3.66581 3.48742 3.91984 3.47253 3.49368 2.28259 2.82127 2.23283 5.15488 3.94472 223 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02204 4.22165 4.94400 0.61958 0.77255 0.52222 0.89944\n+ 221 3.50880 4.82215 5.04905 4.53478 3.18082 4.74118 5.06367 2.01958 4.32734 0.69850 2.99853 4.78952 4.92743 4.47822 4.43685 4.14088 3.74322 2.33516 5.31142 4.19288 224 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02204 4.22165 4.94400 0.61958 0.77255 0.52222 0.89944\n+ 222 2.57806 4.14180 3.08141 2.51897 3.82305 3.47343 3.67530 3.37190 2.29730 2.99620 3.68177 2.85661 3.86092 2.32525 2.41459 2.58583 2.85689 3.07006 3.52885 3.94697 225 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02204 4.22165 4.94400 0.61958 0.77255 0.52222 0.89944\n+ 223 2.71716 5.12674 2.87247 2.36580 4.46794 3.34885 3.62018 3.91609 1.96883 3.40816 4.17998 2.79783 3.85831 2.47160 1.92964 2.63798 2.74543 3.51782 5.54136 4.18326 226 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02204 4.22165 4.94400 0.61958 0.77255 0.52222 0.89944\n+ 224 3.03020 4.40182 4.69920 4.10993 2.85299 4.22466 4.53026 1.84241 3.96710 1.29152 2.15251 4.27790 4.50135 4.09039 3.75721 3.54017 3.25434 2.28553 4.97162 3.85736 227 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02204 4.22165 4.94400 0.61958 0.77255 0.52222 0.89944\n+ 225 2.88351 3.97797 4.31535 3.77723 1.42386 3.93232 3.82766 2.77140 3.38847 2.44565 3.42622 3.85905 4.28790 3.79490 3.76504 3.08182 3.11336 2.59084 2.90343 2.39864 228 f - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01489 4.21450 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W0EOF.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W0EOF.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,439 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W0EOF\n+LENG 139\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:16:47 2016\n+NSEQ 39\n+EFFN 0.680786\n+CKSUM 4228045402\n+STATS LOCAL MSV -10.3175 0.71065\n+STATS LOCAL VITERBI -11.0722 0.71065\n+STATS LOCAL FORWARD -4.6314 0.71065\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.59984 4.10585 2.90344 2.71421 3.05446 2.27988 3.64451 3.05594 2.65284 2.67879 3.69718 3.15910 3.67161 3.08247 2.85073 2.76548 2.94379 2.80442 4.09757 3.28919\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.11069 3.99879 2.44826 0.61958 0.77255 0.00000 *\n+ 1 2.57734 4.70516 2.75537 2.45555 4.15952 1.97320 3.70151 3.57787 2.40570 3.17994 4.01307 2.93949 3.56461 2.87541 2.57922 2.56192 2.87253 3.21693 5.40287 4.09013 1 g - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02998 3.91808 4.64042 0.61958 0.77255 0.55143 0.85832\n+ 2 2.52064 4.25844 4.17091 3.65525 3.50301 3.88734 4.43086 1.70956 3.55346 2.22682 3.37780 3.91529 4.08498 3.84643 3.80660 3.23468 3.05246 1.34903 5.21567 4.00610 2 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02975 3.92556 4.64791 0.61958 0.77255 0.55637 0.85165\n+ 3 1.87320 4.15449 3.73868 3.30656 3.73752 3.27219 4.19881 2.52838 3.23663 2.66156 3.65831 3.50062 3.89615 3.54624 3.51850 2.59577 2.62213 1.60929 5.26532 4.05186 3 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02975 3.92556 4.64791 0.61958 0.77255 0.55637 0.85165\n+ 4 2.65012 4.94711 3.12542 2.64166 4.37320 3.48075 3.63949 3.72481 1.30889 3.27250 4.14850 3.08045 3.92466 2.79237 2.24235 2.86663 3.07063 3.40312 5.41249 4.17916 4 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02975 3.92556 4.64791 0.61958 0.77255 0.55637 0.85165\n+ 5 2.53118 3.90951 3.27977 2.71855 3.53000 3.46224 3.72471 2.76192 2.50151 2.59273 3.47247 2.92895 3.85659 2.99956 3.05312 2.55867 2.42011 2.43876 4.94213 3.55212 5 t - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02975 3.92556 4.64791 0.61958 0.77255 0.55637 0.85165\n+ 6 2.73136 4.50167 3.41602 3.32210 4.46367 0.65170 4.43924 4.07609 3.51060 3.72360 4.69969 3.58027 3.89451 3.83054 3.74093 2.90478 3.21672 3.59416 5.54491 4.56732 6 G - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02975 3.92556 4.64791 0.61958 0.77255 0.55637 0.85165\n+ 7 1.80345 4.20092 3.32460 2.94553 4.06020 1.82946 4.01711 3.40289 2.95081 3.12755 3.69418 3.20533 3.69485 3.27147 3'..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03015 3.91257 4.63492 0.61958 0.77255 0.52450 0.89612\n+ 132 2.68734 3.35014 4.39526 3.84354 3.40281 4.01713 4.47184 1.53799 3.73474 2.15060 3.15869 4.05506 4.37674 3.97719 3.93366 3.34844 3.05856 1.48429 5.11563 3.92029 132 v - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03015 3.91257 4.63492 0.61958 0.77255 0.52450 0.89612\n+ 133 1.43364 4.20464 3.40033 3.02157 3.88110 3.10037 4.03507 3.09524 2.97574 2.63406 3.85056 3.27431 3.75697 3.32301 3.29080 2.23137 2.73906 2.76187 5.31012 4.05812 133 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03015 3.91257 4.63492 0.61958 0.77255 0.52450 0.89612\n+ 134 2.92515 4.34411 4.36030 3.78811 2.45917 4.06502 4.25932 2.15969 3.67115 1.31520 2.65065 4.01794 4.35074 3.83569 3.83669 3.36830 3.14883 2.31501 4.73661 3.16084 134 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03015 3.91257 4.63492 0.61958 0.77255 0.52450 0.89612\n+ 135 3.07888 4.55092 4.30969 3.79349 3.09225 4.14360 4.47243 2.22906 3.56280 1.46793 1.60746 4.09344 4.46441 3.87543 3.76740 3.50804 3.33065 2.28093 5.03905 3.83691 135 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03015 3.91257 4.63492 0.61958 0.77255 0.52450 0.89612\n+ 136 1.13672 4.11946 3.39934 3.15959 4.15062 2.92512 4.20952 3.40941 3.19604 3.23590 4.13344 3.29716 3.67780 3.51079 3.47488 2.17368 2.69687 2.95708 5.54945 4.32052 136 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03015 3.91257 4.63492 0.61958 0.77255 0.52450 0.89612\n+ 137 2.75330 4.75981 3.27942 2.78415 4.21305 3.40876 3.70707 3.66874 2.14781 3.23509 4.13117 3.16590 3.90904 2.88928 1.35456 2.56202 3.03631 3.33307 5.34265 4.09577 137 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03015 3.91257 4.63492 0.61958 0.77255 0.52450 0.89612\n+ 138 1.97234 4.35278 3.25515 2.73499 3.69645 3.32571 3.78078 2.88610 2.69228 2.58093 3.62273 2.85221 3.80927 3.03173 3.07532 2.39002 2.65275 2.64797 5.08949 3.83034 138 a - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03015 3.91257 4.63492 0.61958 0.77255 0.52450 0.89612\n+ 139 2.70283 4.83781 3.02782 2.51085 4.01504 3.45287 3.59879 3.50588 2.21876 2.92577 3.92893 2.87954 3.85578 1.90058 2.41303 2.73551 2.92333 3.19969 5.23922 3.67711 139 q - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02039 3.90282 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W0IVU.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W0IVU.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,334 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W0IVU\n+LENG 104\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:12:29 2016\n+NSEQ 41\n+EFFN 0.818298\n+CKSUM 4143370715\n+STATS LOCAL MSV -9.4496 0.71659\n+STATS LOCAL VITERBI -10.4389 0.71659\n+STATS LOCAL FORWARD -4.1748 0.71659\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.42818 4.27224 3.32694 2.85240 3.27847 2.72914 3.61667 2.88884 2.45813 2.55698 3.70949 3.11380 3.58361 3.13719 2.57718 2.76933 2.84041 2.65262 4.39396 3.33476\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.04558 4.08561 3.58468 0.61958 0.77255 0.00000 *\n+ 1 2.82587 5.04330 2.98991 2.54305 4.43064 3.47874 3.66493 3.84133 1.40860 3.35850 4.19606 3.02743 2.71011 2.68274 2.49895 2.82658 3.05609 3.49095 5.49370 4.21088 1 k - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02581 4.06584 4.78818 0.61958 0.77255 0.50765 0.92107\n+ 2 2.93561 5.00417 3.41048 2.78166 4.37759 3.62225 3.65819 3.74833 1.93150 3.06561 4.14519 3.19529 4.01182 2.80964 1.29901 2.78340 3.13433 3.44259 5.39418 4.18284 2 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02581 4.06584 4.78818 0.61958 0.77255 0.50765 0.92107\n+ 3 2.66360 4.60933 3.17089 2.66139 3.16396 3.32178 1.99965 3.20011 2.62138 2.83692 3.72037 3.05481 3.63249 2.97657 3.02007 2.76506 2.89999 2.93657 4.84261 3.07413 3 h - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02581 4.06584 4.78818 0.61958 0.77255 0.50765 0.92107\n+ 4 2.73919 4.70005 2.63926 2.83520 4.56665 0.84750 4.22939 4.10503 3.26257 3.74688 4.64065 3.25295 3.92660 3.49890 3.65349 2.84315 3.17709 3.62373 5.75674 4.56560 4 g - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02581 4.06584 4.78818 0.61958 0.77255 0.50765 0.92107\n+ 5 2.96335 5.01804 2.93051 2.76145 4.39973 3.53589 3.79457 3.87690 2.27934 3.41422 4.30756 3.20534 4.01504 2.96989 1.06643 2.99456 3.21175 3.54989 5.47225 4.23918 5 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02581 4.06584 4.78818 0.61958 0.77255 0.50765 0.92107\n+ 6 2.94232 4.53094 3.95370 3.59251 3.40642 3.31603 4.35340 2.62752 3.40978 0.90574 3.45884 3.86109 4.26937 3.79762 3.62167 3.25326 3.26223 2.55388 5.10744 3.84161 6 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02581 4.06584 4.78818 0.61958 0.77255 0.50765 0.92107\n+ 7 3.35776 4.70885 4.42849 3.99849 1.85823 4.21615 3.52163 3.23966 3.84265 2.70844 3.83471 3.93558 4.53959 3.93127 3'..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02740 4.00656 4.72891 0.61958 0.77255 0.52812 0.89090\n+ 97 2.42280 4.33517 4.38080 3.89013 3.55799 4.03612 4.65369 1.22195 3.77697 2.18177 3.40478 4.12155 4.45816 4.07025 4.00984 3.40965 3.17728 1.67156 5.36692 4.16082 98 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02740 4.00656 4.72891 0.61958 0.77255 0.52812 0.89090\n+ 98 2.39881 4.32402 4.05116 3.50657 3.32343 3.84429 4.26704 2.25622 3.38363 1.94142 1.88090 3.80128 4.23738 3.67028 3.63775 3.16428 3.04808 1.98936 5.04588 3.86474 99 m - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02740 4.00656 4.72891 0.61958 0.77255 0.52812 0.89090\n+ 99 2.80211 4.33487 3.99413 3.43631 3.17731 3.86127 4.13533 2.29922 3.27579 1.29488 3.02871 3.74343 4.21531 3.58091 3.52085 2.90783 3.04130 2.29673 4.87219 3.50780 100 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02740 4.00656 4.72891 0.61958 0.77255 0.52812 0.89090\n+ 100 2.57264 4.05708 3.52770 2.96137 3.27014 3.55876 3.81092 2.60242 2.76471 2.44755 3.36019 3.33640 3.94382 3.18728 3.11306 2.81946 2.51436 2.50421 4.79344 2.23439 101 y - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02740 4.00656 4.72891 0.61958 0.77255 0.52812 0.89090\n+ 101 2.57295 4.52238 3.12293 2.65589 3.46749 3.38996 3.60008 3.11892 2.55758 2.85344 3.73148 3.10308 1.96273 2.98440 2.98816 2.59066 2.84630 2.90826 5.09744 3.77278 102 p - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02740 4.00656 4.72891 0.61958 0.77255 0.52812 0.89090\n+ 102 2.48533 3.99761 3.14454 2.63508 3.91504 3.29971 3.75407 3.31199 2.59547 2.96693 3.65820 2.64697 3.79506 2.83407 3.00149 1.75571 2.72820 2.98338 5.24314 3.95635 103 s - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02740 4.00656 4.72891 0.61958 0.77255 0.52812 0.89090\n+ 103 2.63545 4.76323 3.08568 2.52582 4.06230 3.43390 3.63388 3.28495 2.23180 3.05812 3.88873 2.96316 3.70159 2.79318 1.97560 2.47009 2.54611 3.14084 5.28534 3.99233 104 r - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03954 4.00656 3.88361 0.61958 0.77255 0.52812 0.89090\n+ 104 2.86872 4.26972 4.38547 3.82394 2.98721 4.07194 4.40815 1.49102 3.71006 1.77706 3.18676 3.83574 4.39389 3.93325 3.90106 3.38632 3.10731 1.75112 5.00105 3.78840 105 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.01875 3.98577 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/hmms/EOG090W0MBV.hmm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/hmms/EOG090W0MBV.hmm Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,307 @@\n+HMMER3/f [3.1b1 | May 2013]\n+NAME EOG090W0MBV\n+LENG 95\n+ALPH amino\n+RF no\n+MM no\n+CONS yes\n+CS no\n+MAP yes\n+DATE Tue Jul 19 12:14:30 2016\n+NSEQ 40\n+EFFN 0.522461\n+CKSUM 2466610219\n+STATS LOCAL MSV -9.1620 0.71848\n+STATS LOCAL VITERBI -10.2836 0.71848\n+STATS LOCAL FORWARD -4.1820 0.71848\n+HMM A C D E F G H I K L M N P Q R S T V W Y \n+ m->m m->i m->d i->m i->i d->m d->d\n+ COMPO 2.56450 4.28309 2.76772 2.56684 3.52985 2.98984 3.92958 2.60319 2.65378 2.43726 3.50008 3.20375 3.32766 3.12900 2.79306 2.83380 2.86717 2.62548 4.82581 3.47921\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.12078 3.88848 2.37195 0.61958 0.77255 0.00000 *\n+ 1 2.73776 5.24526 1.51161 1.96938 4.54883 3.07989 3.66859 4.01576 2.53217 3.56646 4.41644 2.64410 3.75762 2.83675 3.18082 2.71671 3.08140 3.62383 5.75511 4.29766 1 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03375 3.80145 4.52379 0.61958 0.77255 0.56026 0.84644\n+ 2 2.73482 5.13721 1.72435 1.96660 4.37896 3.21556 3.62614 3.85554 2.44602 3.40992 4.24267 2.69454 3.75706 2.78499 3.03922 2.67813 2.99576 3.48531 5.59602 3.77562 2 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03375 3.80145 4.52379 0.61958 0.77255 0.56026 0.84644\n+ 3 2.88000 4.44985 3.38497 3.26359 1.59717 3.76325 3.58869 2.84234 3.22452 2.40749 3.50517 3.51646 4.15213 3.45819 3.49024 3.08880 3.12319 2.69164 4.03170 2.24342 3 f - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03375 3.80145 4.52379 0.61958 0.77255 0.56026 0.84644\n+ 4 2.80226 5.12724 1.29463 2.12543 4.44534 3.12132 3.74491 4.01484 2.77908 3.61191 4.50817 2.54823 3.76387 2.94546 3.32572 2.74529 3.12775 3.61855 5.70534 4.25110 4 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03375 3.80145 4.52379 0.61958 0.77255 0.56026 0.84644\n+ 5 2.71029 5.03800 1.64640 2.10574 4.30687 3.20638 3.65258 3.45863 2.56624 3.35621 4.20700 2.62319 3.75987 2.82200 3.07438 2.67558 2.98543 3.38537 5.56176 4.14234 5 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03375 3.80145 4.52379 0.61958 0.77255 0.49483 0.94078\n+ 6 2.71323 4.88348 2.58228 1.54187 4.15656 3.11457 3.69279 3.52774 2.49648 2.88392 4.08288 2.86916 3.81467 2.87544 2.90741 2.72752 2.98618 3.21871 5.42887 4.07525 6 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03215 3.84920 4.57155 0.61958 0.77255 0.52088 0.90140\n+ 7 2.79294 5.25376 1.85349 1.56821 4.50309 3.20417 3.66083 3.99534 2.59623 3.53617 4.37580 2.67759 3.77401 2.82123 3.'..b'.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03207 3.85159 4.57394 0.61958 0.77255 0.51882 0.90442\n+ 88 3.01488 4.43972 4.30556 3.92076 3.36037 4.04362 4.65292 1.10414 3.74848 1.95094 3.29925 4.16904 4.47705 4.09906 3.94745 3.53710 3.31451 1.84597 5.24671 3.98305 88 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03207 3.85159 4.57394 0.61958 0.77255 0.51882 0.90442\n+ 89 2.84663 5.16630 1.18530 2.15457 4.48708 3.14565 3.78488 4.06518 2.83317 3.66386 4.56946 2.61503 3.79435 2.98913 3.38472 2.78699 3.17578 3.66817 5.74192 4.29188 89 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03207 3.85159 4.57394 0.61958 0.77255 0.51882 0.90442\n+ 90 2.93480 5.04093 2.47954 1.05544 4.38460 3.26094 3.84625 3.83437 2.72418 3.45496 4.43017 2.92178 3.86461 3.06251 3.13066 2.91949 3.23897 3.52046 5.56013 4.28265 90 e - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03207 3.85159 4.57394 0.61958 0.77255 0.51882 0.90442\n+ 91 3.13208 4.60068 4.15587 3.79587 3.12816 3.95543 4.45816 2.33136 3.56381 0.90134 3.15808 4.07334 4.39454 3.93714 3.74320 3.52421 3.42737 2.36322 4.99963 3.71804 91 l - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03207 3.85159 4.57394 0.61958 0.77255 0.51882 0.90442\n+ 92 2.78777 4.31274 4.07176 3.62654 3.47204 3.82941 4.44751 1.34812 3.47644 2.11913 3.35641 3.88916 4.29334 3.82939 3.72104 3.22215 2.65644 1.84493 5.25390 4.02404 92 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03207 3.85159 4.57394 0.61958 0.77255 0.51882 0.90442\n+ 93 3.03418 4.42910 4.46153 3.96261 3.28247 4.22664 4.67031 1.23093 3.77603 1.78914 2.93305 4.23228 4.55455 4.08275 3.98412 3.60501 3.29746 1.80417 5.23328 4.01717 93 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03207 3.85159 4.57394 0.61958 0.77255 0.51882 0.90442\n+ 94 2.54494 4.19420 3.65897 3.14205 3.45783 3.52080 4.00117 1.85097 3.04255 2.42025 3.40734 3.29510 3.98222 3.36966 3.34007 2.74772 2.50192 2.04405 4.98400 3.75521 94 i - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.03207 3.85159 4.57394 0.61958 0.77255 0.51882 0.90442\n+ 95 2.96756 5.09199 0.94846 2.32268 4.46630 3.19520 3.91325 4.04980 2.99351 3.66196 4.63984 2.87790 3.84654 3.15253 3.50671 2.93244 3.30577 3.69129 5.63895 4.34295 95 d - - -\n+ 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503\n+ 0.02170 3.84122 * 0.61958 0.77255 0.00000 *\n+//\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W00C1.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W00C1.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,1316 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t227\n+\n+[block]\n+# block no. 0 follows, 32 sequences, length 25\n+# corresponding to MSA columns:\n+# 250-274\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01279\t0.01289\t0.09935\t0.01354\t0.01674\t0.01120\t0.01246\t0.02092\t0.21099\t0.02247\t0.03036\t0.05394\t0.02985\t0.01440\t0.00823\t0.00274\t0.00639\t0.40689\t0.00595\t0.00788\n+1\t0.02197\t0.01487\t0.14850\t0.01256\t0.01779\t0.01034\t0.01190\t0.02614\t0.03798\t0.41734\t0.17879\t0.02738\t0.02565\t0.00918\t0.00694\t0.00210\t0.00592\t0.00764\t0.00703\t0.00997\n+2\t0.02202\t0.07806\t0.09380\t0.01961\t0.10645\t0.41654\t0.01487\t0.09763\t0.05172\t0.02087\t0.01216\t0.01381\t0.00972\t0.00689\t0.00614\t0.00184\t0.01021\t0.00488\t0.00385\t0.00892\n+3\t0.01554\t0.01697\t0.03473\t0.11423\t0.03462\t0.01669\t0.54504\t0.02241\t0.08665\t0.02164\t0.01478\t0.01878\t0.01109\t0.00614\t0.00766\t0.00226\t0.01041\t0.00765\t0.00370\t0.00902\n+4\t0.01875\t0.01639\t0.10359\t0.12721\t0.28295\t0.01449\t0.03556\t0.02479\t0.10023\t0.18223\t0.01742\t0.01899\t0.01269\t0.00703\t0.00670\t0.00210\t0.00759\t0.00628\t0.00478\t0.01024\n+5\t0.01203\t0.00630\t0.00718\t0.00718\t0.00846\t0.00645\t0.00531\t0.01416\t0.01287\t0.02187\t0.01988\t0.02449\t0.01632\t0.01530\t0.09696\t0.12291\t0.00533\t0.00630\t0.58498\t0.00572\n+6\t0.00836\t0.00621\t0.00776\t0.00892\t0.00980\t0.00569\t0.00623\t0.00974\t0.01348\t0.01743\t0.04331\t0.53293\t0.19451\t0.04395\t0.00930\t0.00277\t0.00403\t0.06394\t0.00616\t0.00550\n+7\t0.01435\t0.18134\t0.59064\t0.01760\t0.02668\t0.01778\t0.02213\t0.02102\t0.01406\t0.02016\t0.01150\t0.01349\t0.00852\t0.00625\t0.00596\t0.00199\t0.00937\t0.00468\t0.00284\t0.00966\n+8\t0.01060\t0.00710\t0.00925\t0.07213\t0.01255\t0.00702\t0.00690\t0.01154\t0.01250\t0.04772\t0.05087\t0.19403\t0.13470\t0.23455\t0.01784\t0.10114\t0.00545\t0.05380\t0.00504\t0.00528\n+9\t0.19480\t0.01393\t0.01400\t0.01259\t0.01642\t0.01601\t0.01000\t0.06782\t0.47377\t0.02883\t0.02316\t0.02444\t0.01812\t0.00897\t0.00637\t0.00227\t0.00545\t0.04721\t0.00618\t0.00964\n+10\t0.01116\t0.01003\t0.08305\t0.00973\t0.01247\t0.00749\t0.00847\t0.01464\t0.01809\t0.07160\t0.52471\t0.04662\t0.11107\t0.01303\t0.00772\t0.00215\t0.00413\t0.03002\t0.00685\t0.00697\n+11\t0.01610\t0.01624\t0.03011\t0.09026\t0.48275\t0.01615\t0.20697\t0.02058\t0.01529\t0.02145\t0.01283\t0.01711\t0.01038\t0.00594\t0.00700\t0.00209\t0.00896\t0.00651\t0.00332\t0.00996\n+12\t0.00859\t0.00669\t0.00730\t0.00739\t0.00893\t0.00595\t0.00520\t0.01005\t0.01428\t0.01789\t0.12435\t0.10917\t0.42988\t0.18427\t0.01387\t0.00325\t0.00416\t0.02752\t0.00587\t0.00537\n+13\t0.09223\t0.00841\t0.00952\t0.01010\t0.01166\t0.00881\t0.00722\t0.01596\t0.15960\t0.02080\t0.03325\t0.50301\t0.06024\t0.01685\t0.00772\t0.00255\t0.00431\t0.01490\t0.00614\t0.00673\n+14\t0.01661\t0.01594\t0.02724\t0.04119\t0.72233\t0.01594\t0.02059\t0.02059\t0.01528\t0.02192\t0.01262\t0.01661\t0.01063\t0.00598\t0.00664\t0.00199\t0.00797\t0.00598\t0.00332\t0.01063\n+15\t0.01109\t0.00799\t0.01074\t0.01180\t0.08636\t0.00743\t0.00762\t0.01370\t0.01690\t0.06007\t0.41412\t0.07057\t0.14954\t0.09019\t0.01043\t0.00259\t0.00422\t0.01149\t0.00645\t0.00670\n+16\t0.00977\t0.00742\t0.00914\t0.00889\t0.00963\t0.00772\t0.00618\t0.01109\t0.01323\t0.01800\t0.20056\t0.13684\t0.12810\t0.30258\t0.01957\t0.00398\t0.08487\t0.01171\t0.00533\t0.00537\n+17\t0.01878\t0.00955\t0.01219\t0.01044\t0.01369\t0.00918\t0.00827\t0.02352\t0.10158\t0.30165\t0.19853\t0.03156\t0.04664\t0.01443\t0.08525\t0.00300\t0.00602\t0.00838\t0.08856\t0.00880\n+18\t0.00940\t0.00707\t0.00993\t0.00993\t0.01113\t0.00785\t0.00752\t0.01146\t0.01122\t0.01561\t0.02439\t0.03289\t0.10298\t0.12284\t0.57350\t0.00929\t0.01497\t0.00831\t0.00397\t0.00574\n+19\t0.01110\t0.00929\t0.00915\t0.00945\t0.01103\t0.08430\t0.00675\t0.01268\t0.01495\t0.05160\t0.09758\t0.36660\t0.23750\t0.03537\t0.00860\t0.00250\t0.00472\t0.01468\t0.00607\t0.00608\n+20\t0.01018\t0.01042\t0.08591\t0.00988\t0.01216\t0.00825\t0.00810\t0.01433\t0.09830\t0.01938\t0.11200\t0.22540\t0.17753\t0.16239\t0.01294\t0.00318\t0.00504\t0.01253\t0.00564\t0.00643\n+21\t0.09481\t0.01076\t0.01187\t0.01110\t0.01387\t0.01174\t0.00872\t0.02322\t0.30936\t0.02699\t0.28122\t0.03827\t0.03686\t0.01152\t0.00722\t0.00228\t0.00460\t0.08067\t0.00669\t0.00822\n+22\t0.00974\t0.00658\t0.00769\t0.00769\t0.00782\t0.00671\t0.00453\t0.01000\t0.00987\t0.01329\t0.02080\t'..b'0.00621\t0.00463\t0.00965\t0.01074\t0.01422\t0.02702\t0.21639\t0.06003\t0.55294\t0.02686\t0.00541\t0.00574\t0.01219\t0.00468\t0.00447\n+45\t0.62393\t0.10844\t0.06240\t0.01015\t0.01494\t0.01677\t0.00923\t0.05005\t0.01277\t0.02827\t0.00982\t0.01134\t0.00770\t0.00626\t0.00444\t0.00200\t0.00586\t0.00382\t0.00402\t0.00780\n+46\t0.01054\t0.00767\t0.00930\t0.00834\t0.01081\t0.00663\t0.00636\t0.01327\t0.01739\t0.05500\t0.42696\t0.04827\t0.22947\t0.01326\t0.00750\t0.00201\t0.00356\t0.01142\t0.00670\t0.10552\n+47\t0.01567\t0.01498\t0.02554\t0.20972\t0.56114\t0.01570\t0.02013\t0.01977\t0.01483\t0.02078\t0.01246\t0.01691\t0.01023\t0.00615\t0.00666\t0.00205\t0.00820\t0.00597\t0.00324\t0.00987\n+48\t0.01618\t0.01278\t0.01396\t0.01256\t0.01605\t0.01424\t0.00980\t0.03093\t0.53021\t0.07483\t0.11506\t0.03095\t0.05698\t0.01019\t0.00706\t0.00226\t0.00501\t0.02418\t0.00696\t0.00982\n+49\t0.02506\t0.03198\t0.01901\t0.01729\t0.02074\t0.73725\t0.01296\t0.02679\t0.01901\t0.01642\t0.01037\t0.01210\t0.00864\t0.00691\t0.00605\t0.00173\t0.01210\t0.00432\t0.00346\t0.00778\n+50\t0.00839\t0.00675\t0.00704\t0.00701\t0.00879\t0.00587\t0.00498\t0.00986\t0.01448\t0.01774\t0.10302\t0.05963\t0.54164\t0.16032\t0.01297\t0.00307\t0.00398\t0.01318\t0.00589\t0.00540\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+6\t69\n+\n+[block]\n+# block no. 19 follows, 32 sequences, length 15\n+# corresponding to MSA columns:\n+# 1815-1829\n+name=unknown_T\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.03716\t0.01847\t0.02320\t0.01797\t0.02297\t0.10967\t0.18252\t0.31564\t0.02300\t0.08479\t0.01731\t0.07162\t0.01400\t0.00844\t0.00706\t0.00212\t0.00852\t0.02030\t0.00550\t0.00974\n+1\t0.01359\t0.03380\t0.69157\t0.01963\t0.02937\t0.01566\t0.06173\t0.02126\t0.01426\t0.02126\t0.01213\t0.01438\t0.00859\t0.00634\t0.00646\t0.00213\t0.00999\t0.00512\t0.00286\t0.00987\n+2\t0.00926\t0.00685\t0.00864\t0.00820\t0.00988\t0.00623\t0.00615\t0.01221\t0.01844\t0.02559\t0.62144\t0.05228\t0.16149\t0.01421\t0.00792\t0.00213\t0.00320\t0.01244\t0.00721\t0.00623\n+3\t0.07251\t0.01559\t0.01698\t0.05709\t0.01829\t0.12606\t0.04865\t0.11828\t0.01548\t0.02091\t0.01531\t0.08382\t0.01507\t0.14932\t0.01545\t0.00312\t0.18909\t0.00747\t0.00418\t0.00734\n+4\t0.01260\t0.00995\t0.01063\t0.00960\t0.01219\t0.01015\t0.00722\t0.11739\t0.14569\t0.02366\t0.11198\t0.04541\t0.31114\t0.12883\t0.01158\t0.00287\t0.00480\t0.01085\t0.00620\t0.00726\n+5\t0.16206\t0.01191\t0.01222\t0.01072\t0.01415\t0.01292\t0.00853\t0.17290\t0.12648\t0.02706\t0.03254\t0.03252\t0.22699\t0.01602\t0.10064\t0.00327\t0.00681\t0.00844\t0.00571\t0.00809\n+6\t0.01404\t0.01283\t0.02022\t0.02823\t0.43535\t0.01224\t0.01497\t0.01719\t0.01463\t0.02076\t0.02092\t0.15696\t0.06672\t0.00939\t0.00684\t0.00200\t0.00645\t0.00868\t0.00416\t0.12744\n+7\t0.13660\t0.06839\t0.39689\t0.15145\t0.02824\t0.01609\t0.01918\t0.02120\t0.06262\t0.02202\t0.01252\t0.01492\t0.00924\t0.00657\t0.00601\t0.00211\t0.00853\t0.00505\t0.00335\t0.00903\n+8\t0.01542\t0.01160\t0.01228\t0.01135\t0.01379\t0.11659\t0.00883\t0.01765\t0.01426\t0.14759\t0.02611\t0.02947\t0.12367\t0.03098\t0.38149\t0.00652\t0.01259\t0.00775\t0.00485\t0.00721\n+9\t0.13208\t0.14982\t0.01505\t0.01060\t0.01330\t0.01314\t0.00836\t0.11913\t0.01566\t0.02268\t0.02455\t0.39560\t0.02718\t0.01400\t0.00684\t0.00228\t0.00523\t0.01191\t0.00537\t0.00722\n+10\t0.01421\t0.01794\t0.13729\t0.02604\t0.17160\t0.01441\t0.32643\t0.01902\t0.01491\t0.02074\t0.01747\t0.15429\t0.01634\t0.00867\t0.00754\t0.00227\t0.00904\t0.00912\t0.00382\t0.00884\n+11\t0.01101\t0.00904\t0.01356\t0.01853\t0.22484\t0.00882\t0.01014\t0.01283\t0.01308\t0.01784\t0.02752\t0.38391\t0.04868\t0.15373\t0.01270\t0.00319\t0.00560\t0.01326\t0.00495\t0.00677\n+12\t0.01495\t0.02564\t0.38101\t0.12482\t0.02639\t0.12479\t0.01834\t0.02045\t0.01478\t0.02059\t0.01359\t0.01641\t0.01020\t0.00677\t0.00606\t0.00198\t0.00885\t0.00525\t0.15057\t0.00854\n+13\t0.16022\t0.01072\t0.01194\t0.00986\t0.01416\t0.00949\t0.00800\t0.01632\t0.01446\t0.02390\t0.12371\t0.02811\t0.02192\t0.00856\t0.00591\t0.00168\t0.00491\t0.10524\t0.00486\t0.41602\n+14\t0.01135\t0.00879\t0.00985\t0.00926\t0.01177\t0.00842\t0.00735\t0.11704\t0.01850\t0.02376\t0.17547\t0.05610\t0.38810\t0.01524\t0.00794\t0.00232\t0.00438\t0.11110\t0.00651\t0.00675\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t4981\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W00C1.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W01M6.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W01M6.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,938 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+2\t960\n+\n+[block]\n+# block no. 0 follows, 27 sequences, length 13\n+# corresponding to MSA columns:\n+# 1014-1026\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01262\t0.01087\t0.01456\t0.01804\t0.16280\t0.03739\t0.01076\t0.01544\t0.01737\t0.02369\t0.22838\t0.25888\t0.08833\t0.01527\t0.00842\t0.00245\t0.00546\t0.01367\t0.00630\t0.04933\n+1\t0.01079\t0.00774\t0.00962\t0.01010\t0.01099\t0.00778\t0.00687\t0.04609\t0.01419\t0.01896\t0.03396\t0.34556\t0.08237\t0.23100\t0.12397\t0.00548\t0.00767\t0.01500\t0.00579\t0.00605\n+2\t0.01021\t0.00785\t0.01037\t0.07592\t0.01458\t0.00755\t0.00802\t0.01307\t0.01821\t0.02466\t0.37453\t0.20534\t0.16831\t0.01688\t0.00879\t0.00253\t0.00432\t0.01488\t0.00721\t0.00678\n+3\t0.02351\t0.02383\t0.17162\t0.01763\t0.02437\t0.02092\t0.01664\t0.41236\t0.14635\t0.03880\t0.01905\t0.01912\t0.01371\t0.00871\t0.00737\t0.00231\t0.00838\t0.00673\t0.00650\t0.01210\n+4\t0.01632\t0.01408\t0.01473\t0.01343\t0.01725\t0.01576\t0.01040\t0.03307\t0.53258\t0.02862\t0.04018\t0.03739\t0.17049\t0.01201\t0.00782\t0.00252\t0.00541\t0.01001\t0.00741\t0.01054\n+5\t0.18242\t0.00831\t0.00902\t0.00995\t0.01149\t0.00841\t0.00703\t0.01291\t0.01411\t0.02223\t0.03732\t0.51271\t0.09946\t0.01922\t0.00833\t0.00281\t0.00457\t0.01681\t0.00638\t0.00650\n+6\t0.01806\t0.51489\t0.09322\t0.01221\t0.01796\t0.02327\t0.01240\t0.02126\t0.01525\t0.02029\t0.01368\t0.01575\t0.01162\t0.00693\t0.00507\t0.00169\t0.00723\t0.00476\t0.17539\t0.00908\n+7\t0.79154\t0.01436\t0.01091\t0.00976\t0.01436\t0.01665\t0.00804\t0.02182\t0.01263\t0.03331\t0.01034\t0.01206\t0.00804\t0.00689\t0.00459\t0.00230\t0.00574\t0.00402\t0.00459\t0.00804\n+8\t0.05711\t0.01551\t0.02179\t0.16978\t0.23525\t0.06675\t0.04143\t0.01938\t0.01472\t0.02040\t0.01517\t0.02452\t0.01418\t0.16977\t0.01555\t0.00346\t0.07551\t0.00734\t0.00380\t0.00859\n+9\t0.00947\t0.00696\t0.00891\t0.00991\t0.01099\t0.00641\t0.00702\t0.01142\t0.01617\t0.02153\t0.17973\t0.46148\t0.14583\t0.02079\t0.00927\t0.00282\t0.00420\t0.05361\t0.00715\t0.00631\n+10\t0.02042\t0.01485\t0.01677\t0.01442\t0.01826\t0.01620\t0.01132\t0.31095\t0.13266\t0.06408\t0.02634\t0.20007\t0.02421\t0.01704\t0.07313\t0.00338\t0.00783\t0.01073\t0.00707\t0.01028\n+11\t0.20133\t0.01302\t0.01583\t0.01244\t0.01793\t0.01218\t0.01027\t0.03300\t0.01934\t0.55065\t0.02509\t0.02234\t0.01609\t0.00868\t0.00683\t0.00230\t0.00619\t0.00670\t0.00817\t0.01162\n+12\t0.00954\t0.00685\t0.00888\t0.00981\t0.01063\t0.00638\t0.00670\t0.01134\t0.01584\t0.02148\t0.20988\t0.48307\t0.07693\t0.07257\t0.01130\t0.00312\t0.00429\t0.01816\t0.00705\t0.00618\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+4\t6\n+\n+[block]\n+# block no. 1 follows, 27 sequences, length 9\n+# corresponding to MSA columns:\n+# 1033-1041\n+name=unknown_B\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.12611\t0.02214\t0.15622\t0.06242\t0.14677\t0.06950\t0.12057\t0.06562\t0.04166\t0.06533\t0.01745\t0.01976\t0.03842\t0.00771\t0.00717\t0.00232\t0.00931\t0.00672\t0.00453\t0.01027\n+1\t0.01466\t0.01347\t0.08467\t0.02016\t0.18461\t0.01085\t0.01340\t0.01826\t0.01763\t0.08713\t0.18780\t0.18049\t0.08857\t0.01377\t0.00831\t0.00249\t0.00614\t0.03250\t0.00623\t0.00886\n+2\t0.01877\t0.01484\t0.04354\t0.13827\t0.12182\t0.03610\t0.10851\t0.02318\t0.03527\t0.16615\t0.07182\t0.08806\t0.05782\t0.01154\t0.02849\t0.00270\t0.00841\t0.00933\t0.00567\t0.00969\n+3\t0.01572\t0.00730\t0.01072\t0.01016\t0.01095\t0.00706\t0.00706\t0.01334\t0.01127\t0.10766\t0.01516\t0.02294\t0.01365\t0.02349\t0.02603\t0.67587\t0.00643\t0.00659\t0.00405\t0.00453\n+4\t0.02340\t0.10791\t0.05975\t0.01634\t0.02188\t0.07939\t0.01396\t0.30598\t0.23131\t0.03470\t0.02001\t0.01971\t0.01495\t0.00876\t0.00707\t0.00222\t0.00802\t0.00667\t0.00642\t0.01155\n+5\t0.00947\t0.00711\t0.00878\t0.00928\t0.01069\t0.00642\t0.00661\t0.01165\t0.01719\t0.02288\t0.26795\t0.33675\t0.21933\t0.01940\t0.00905\t0.00266\t0.00390\t0.01713\t0.00732\t0.00642\n+6\t0.01891\t0.14835\t0.24026\t0.11473\t0.02870\t0.07070\t0.04192\t0.05328\t0.04152\t0.07564\t0.01477\t0.01685\t0.01107\t0.00721\t0.00666\t0.00208\t0.00932\t0.00565\t0.00420\t0.08819\n+7\t0.01608\t0.01408\t0.01806\t0.01535\t0.01896\t0.01530\t0.10026\t0.02924\t0.40075\t0.02567\t0.02887\t0.03367\t0.05640\t0.17682\t0.01470\t0.00359\t0.00699\t0.00937\t0.00630'..b'1\t0.08430\t0.14408\t0.04693\t0.03572\t0.02265\t0.01339\t0.01647\t0.01074\t0.00726\t0.00806\t0.00221\t0.05576\t0.00614\t0.00371\t0.01031\n+8\t0.01352\t0.01207\t0.01530\t0.01402\t0.01462\t0.04600\t0.01080\t0.01505\t0.01184\t0.01675\t0.01670\t0.02885\t0.01715\t0.21971\t0.24646\t0.00702\t0.27556\t0.00803\t0.00384\t0.00670\n+9\t0.01796\t0.08543\t0.04565\t0.01963\t0.14123\t0.01476\t0.06125\t0.03980\t0.03922\t0.06228\t0.01481\t0.01699\t0.01182\t0.00634\t0.00629\t0.00164\t0.00716\t0.00548\t0.00452\t0.39775\n+10\t0.02660\t0.02288\t0.05477\t0.05963\t0.08978\t0.16634\t0.03695\t0.08593\t0.02157\t0.14900\t0.02143\t0.02562\t0.01722\t0.01587\t0.07760\t0.00401\t0.07231\t0.00788\t0.03253\t0.01208\n+11\t0.02055\t0.03609\t0.54247\t0.02413\t0.03409\t0.01910\t0.09894\t0.02672\t0.01877\t0.06322\t0.01878\t0.02283\t0.01442\t0.01006\t0.00912\t0.00317\t0.01203\t0.00740\t0.00512\t0.01301\n+12\t0.01678\t0.01288\t0.01582\t0.01608\t0.05237\t0.01327\t0.01090\t0.01891\t0.07753\t0.02247\t0.02780\t0.04078\t0.05993\t0.24534\t0.27700\t0.00817\t0.05834\t0.01034\t0.00609\t0.00921\n+13\t0.02248\t0.13167\t0.23480\t0.15981\t0.07092\t0.06550\t0.07086\t0.04790\t0.01953\t0.06228\t0.01833\t0.02301\t0.01472\t0.01014\t0.00881\t0.00304\t0.01126\t0.00734\t0.00535\t0.01225\n+14\t0.01641\t0.01597\t0.07950\t0.01520\t0.01754\t0.07963\t0.01161\t0.01733\t0.01837\t0.02441\t0.09848\t0.48363\t0.04475\t0.02119\t0.01058\t0.00353\t0.00739\t0.01756\t0.00766\t0.00927\n+15\t0.01469\t0.01100\t0.01348\t0.01417\t0.01512\t0.01057\t0.00980\t0.01490\t0.01732\t0.02400\t0.10443\t0.55148\t0.04881\t0.02326\t0.01250\t0.00372\t0.07479\t0.01923\t0.00798\t0.00875\n+16\t0.02213\t0.02277\t0.09375\t0.10330\t0.19299\t0.06997\t0.12504\t0.06113\t0.03797\t0.02753\t0.01967\t0.04927\t0.01692\t0.01127\t0.01104\t0.00322\t0.08184\t0.00863\t0.02942\t0.01214\n+17\t0.01269\t0.01003\t0.01436\t0.07007\t0.01835\t0.01026\t0.05384\t0.07635\t0.01731\t0.02277\t0.03618\t0.27359\t0.09943\t0.02073\t0.06097\t0.00358\t0.00743\t0.17847\t0.00622\t0.00738\n+18\t0.01373\t0.00874\t0.01223\t0.01321\t0.01519\t0.00866\t0.01123\t0.01686\t0.01680\t0.08836\t0.03658\t0.12083\t0.03848\t0.02295\t0.07678\t0.00409\t0.00784\t0.47330\t0.00680\t0.00733\n+19\t0.00983\t0.00759\t0.01111\t0.01151\t0.01254\t0.00710\t0.05531\t0.01139\t0.01427\t0.01892\t0.03911\t0.57796\t0.07857\t0.09260\t0.01219\t0.00336\t0.00517\t0.01888\t0.00642\t0.00619\n+20\t0.02553\t0.22426\t0.02698\t0.01830\t0.08763\t0.07340\t0.01416\t0.29037\t0.02468\t0.12128\t0.01639\t0.01688\t0.01221\t0.00791\t0.00662\t0.00203\t0.00831\t0.00588\t0.00583\t0.01137\n+21\t0.01740\t0.08900\t0.28763\t0.02164\t0.14121\t0.01681\t0.01925\t0.07422\t0.01824\t0.06948\t0.08363\t0.02456\t0.06679\t0.00902\t0.00773\t0.00228\t0.02865\t0.00731\t0.00474\t0.01042\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t7\n+\n+[block]\n+# block no. 23 follows, 27 sequences, length 7\n+# corresponding to MSA columns:\n+# 2719-2725\n+name=unknown_X\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01660\t0.04485\t0.08412\t0.05611\t0.12205\t0.03271\t0.20906\t0.06238\t0.01812\t0.02463\t0.05562\t0.02715\t0.08785\t0.00870\t0.00772\t0.00223\t0.00893\t0.02368\t0.00460\t0.10290\n+1\t0.01443\t0.01375\t0.02235\t0.59278\t0.04534\t0.01764\t0.01982\t0.01877\t0.01421\t0.01877\t0.01256\t0.01914\t0.00987\t0.00844\t0.01052\t0.00262\t0.14091\t0.00658\t0.00329\t0.00822\n+2\t0.01497\t0.01329\t0.01808\t0.01337\t0.01941\t0.01055\t0.08762\t0.01841\t0.01552\t0.02358\t0.01640\t0.09333\t0.01513\t0.00750\t0.00632\t0.00147\t0.00621\t0.00672\t0.00459\t0.60754\n+3\t0.01968\t0.01502\t0.01883\t0.01562\t0.01977\t0.01619\t0.08147\t0.10777\t0.33896\t0.09883\t0.02573\t0.02925\t0.02056\t0.14289\t0.01319\t0.00332\t0.00716\t0.00857\t0.00674\t0.01043\n+4\t0.02024\t0.01363\t0.01529\t0.01342\t0.01718\t0.01478\t0.01024\t0.03350\t0.41589\t0.17097\t0.02877\t0.03100\t0.02254\t0.14335\t0.01307\t0.00333\t0.00621\t0.00863\t0.00734\t0.01061\n+5\t0.01287\t0.01036\t0.01452\t0.04066\t0.09188\t0.01039\t0.03903\t0.04610\t0.05287\t0.02400\t0.22084\t0.12100\t0.08664\t0.15765\t0.03543\t0.00367\t0.00642\t0.01196\t0.00613\t0.00758\n+6\t0.30950\t0.01714\t0.09049\t0.02001\t0.14315\t0.01532\t0.08411\t0.02291\t0.01576\t0.10811\t0.02108\t0.02244\t0.08384\t0.00835\t0.00660\t0.00233\t0.00744\t0.00683\t0.00498\t0.00960\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t308\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W01M6.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W02B6.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W02B6.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,547 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+35\t2346\n+\n+[block]\n+# block no. 0 follows, 32 sequences, length 21\n+# corresponding to MSA columns:\n+# 2826-2846\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.04488\t0.13434\t0.18209\t0.01894\t0.12152\t0.08159\t0.04855\t0.08363\t0.03227\t0.03817\t0.01654\t0.02060\t0.04125\t0.01082\t0.06075\t0.00266\t0.00902\t0.03938\t0.00398\t0.00903\n+1\t0.03618\t0.00862\t0.01066\t0.00953\t0.01193\t0.00836\t0.00745\t0.01612\t0.01654\t0.16463\t0.25189\t0.07830\t0.25644\t0.01362\t0.00892\t0.00226\t0.07349\t0.01120\t0.00664\t0.00723\n+2\t0.01383\t0.01584\t0.09368\t0.02155\t0.14293\t0.04306\t0.19186\t0.01852\t0.04434\t0.02133\t0.10205\t0.07627\t0.08011\t0.01010\t0.00816\t0.00229\t0.03883\t0.06241\t0.00455\t0.00830\n+3\t0.06016\t0.11229\t0.16403\t0.12925\t0.12084\t0.04001\t0.08695\t0.02041\t0.01468\t0.07367\t0.03048\t0.04000\t0.01296\t0.00759\t0.00702\t0.00211\t0.03511\t0.02977\t0.00382\t0.00885\n+4\t0.01060\t0.00822\t0.01263\t0.09945\t0.01677\t0.00853\t0.05783\t0.01294\t0.01300\t0.04272\t0.02908\t0.25779\t0.09652\t0.06344\t0.20573\t0.00494\t0.00906\t0.03956\t0.00489\t0.00629\n+5\t0.01722\t0.00915\t0.01216\t0.01175\t0.05220\t0.00834\t0.00842\t0.04391\t0.01738\t0.27030\t0.16554\t0.20849\t0.12046\t0.01333\t0.00755\t0.00225\t0.00468\t0.01159\t0.00704\t0.00825\n+6\t0.08546\t0.05379\t0.07765\t0.09064\t0.15658\t0.11650\t0.09860\t0.10453\t0.03490\t0.06724\t0.01339\t0.01581\t0.01024\t0.00689\t0.00704\t0.00206\t0.03952\t0.00569\t0.00412\t0.00932\n+7\t0.01584\t0.01648\t0.14378\t0.05307\t0.11120\t0.03325\t0.04219\t0.09071\t0.06562\t0.08824\t0.04683\t0.12976\t0.04474\t0.03685\t0.04844\t0.00282\t0.00773\t0.00864\t0.00500\t0.00880\n+8\t0.30047\t0.01304\t0.01391\t0.01152\t0.01555\t0.01417\t0.00943\t0.12043\t0.05068\t0.22218\t0.04479\t0.02036\t0.05272\t0.00856\t0.00729\t0.00216\t0.07164\t0.00612\t0.00592\t0.00905\n+9\t0.00952\t0.00696\t0.00919\t0.04044\t0.01206\t0.00685\t0.00731\t0.04836\t0.01444\t0.01932\t0.08167\t0.61018\t0.04214\t0.01910\t0.00837\t0.00264\t0.00434\t0.04496\t0.00620\t0.00595\n+10\t0.01613\t0.09003\t0.06760\t0.08245\t0.12965\t0.08873\t0.06703\t0.01987\t0.03381\t0.06863\t0.09911\t0.06892\t0.01991\t0.00930\t0.00833\t0.00217\t0.08035\t0.03515\t0.00442\t0.00841\n+11\t0.01625\t0.01744\t0.11550\t0.09213\t0.31467\t0.01637\t0.04661\t0.04837\t0.01473\t0.05687\t0.01282\t0.01674\t0.01039\t0.00902\t0.03606\t0.00255\t0.15450\t0.00599\t0.00356\t0.00945\n+12\t0.00872\t0.00645\t0.00832\t0.00894\t0.00987\t0.00632\t0.00628\t0.01027\t0.01293\t0.01725\t0.08872\t0.34930\t0.14915\t0.10899\t0.17146\t0.00479\t0.00714\t0.01408\t0.00550\t0.00552\n+13\t0.02167\t0.15913\t0.09718\t0.01469\t0.01992\t0.16051\t0.01309\t0.16066\t0.14906\t0.11435\t0.01670\t0.01665\t0.01239\t0.00745\t0.00613\t0.00192\t0.00795\t0.00551\t0.00517\t0.00987\n+14\t0.04102\t0.01622\t0.09592\t0.04680\t0.04446\t0.01474\t0.07936\t0.12596\t0.15126\t0.20642\t0.02082\t0.06632\t0.01580\t0.00868\t0.00741\t0.00220\t0.03332\t0.00733\t0.00590\t0.01005\n+15\t0.21062\t0.02001\t0.15830\t0.13645\t0.08327\t0.08863\t0.14867\t0.02048\t0.01431\t0.02229\t0.01296\t0.01600\t0.02684\t0.00655\t0.00621\t0.00211\t0.00878\t0.00562\t0.00348\t0.00844\n+16\t0.01793\t0.03565\t0.08622\t0.04679\t0.08046\t0.01483\t0.01294\t0.27422\t0.02033\t0.06648\t0.01914\t0.11116\t0.01710\t0.04020\t0.10343\t0.00343\t0.00854\t0.02671\t0.00530\t0.00913\n+17\t0.11861\t0.05745\t0.08956\t0.01631\t0.04411\t0.20843\t0.05758\t0.17558\t0.03759\t0.02584\t0.01257\t0.01409\t0.00971\t0.00670\t0.00595\t0.00184\t0.00855\t0.00499\t0.00433\t0.10023\n+18\t0.16610\t0.03265\t0.04295\t0.04718\t0.11312\t0.03509\t0.01258\t0.12980\t0.01660\t0.08796\t0.01500\t0.01686\t0.03578\t0.00773\t0.00815\t0.00203\t0.11277\t0.00552\t0.00456\t0.10757\n+19\t0.05087\t0.03470\t0.01667\t0.03200\t0.01773\t0.03266\t0.04229\t0.15401\t0.03416\t0.11082\t0.01963\t0.09147\t0.04437\t0.03637\t0.00849\t0.00209\t0.05948\t0.00727\t0.00527\t0.19968\n+20\t0.01605\t0.01741\t0.01565\t0.07206\t0.01879\t0.28049\t0.03934\t0.01893\t0.03953\t0.01665\t0.01576\t0.05121\t0.01449\t0.05985\t0.28764\t0.00554\t0.01322\t0.00668\t0.00373\t0.00695\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+1\t4\n+\n+[block]\n+# block no. 1 follows, 32 sequences, length 25\n+# corresponding to MSA columns:\n+# 2851-2875\n+name=unknown_B\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\t'..b'016\t0.00584\t0.00768\t0.00223\t0.01074\t0.00755\t0.00346\t0.00912\n+25\t0.81159\t0.01298\t0.00986\t0.00882\t0.01298\t0.01505\t0.00727\t0.01972\t0.01142\t0.03010\t0.00934\t0.01090\t0.00727\t0.00623\t0.00415\t0.00208\t0.00519\t0.00363\t0.00415\t0.00727\n+26\t0.00959\t0.00719\t0.01078\t0.01078\t0.01198\t0.00839\t0.00839\t0.01198\t0.01078\t0.01558\t0.01797\t0.02636\t0.01677\t0.05032\t0.73760\t0.01078\t0.01797\t0.00719\t0.00359\t0.00599\n+27\t0.00959\t0.00719\t0.01078\t0.01078\t0.01198\t0.00839\t0.00839\t0.01198\t0.01078\t0.01558\t0.01797\t0.02636\t0.01677\t0.05032\t0.73760\t0.01078\t0.01797\t0.00719\t0.00359\t0.00599\n+28\t0.01239\t0.01144\t0.01909\t0.67485\t0.04285\t0.01411\t0.01769\t0.01665\t0.01352\t0.01733\t0.01432\t0.04882\t0.01210\t0.00798\t0.00694\t0.00231\t0.00859\t0.04842\t0.00330\t0.00730\n+29\t0.00920\t0.00677\t0.00861\t0.00831\t0.00988\t0.00618\t0.00617\t0.01204\t0.01807\t0.02509\t0.58722\t0.10627\t0.14184\t0.01468\t0.00797\t0.00218\t0.00325\t0.01291\t0.00716\t0.00618\n+30\t0.00960\t0.00715\t0.01058\t0.01058\t0.01171\t0.00828\t0.00813\t0.01185\t0.01072\t0.01543\t0.01816\t0.02739\t0.01722\t0.09223\t0.69630\t0.01053\t0.01730\t0.00734\t0.00362\t0.00588\n+31\t0.01267\t0.01193\t0.02013\t0.74806\t0.04621\t0.01491\t0.01863\t0.01714\t0.01342\t0.01714\t0.01193\t0.01789\t0.00894\t0.00671\t0.00671\t0.00224\t0.00894\t0.00596\t0.00298\t0.00745\n+32\t0.81159\t0.01298\t0.00986\t0.00882\t0.01298\t0.01505\t0.00727\t0.01972\t0.01142\t0.03010\t0.00934\t0.01090\t0.00727\t0.00623\t0.00415\t0.00208\t0.00519\t0.00363\t0.00415\t0.00727\n+33\t0.01846\t0.67758\t0.03366\t0.01310\t0.04862\t0.02564\t0.01198\t0.07222\t0.01508\t0.01809\t0.00999\t0.01143\t0.00891\t0.00593\t0.00459\t0.00150\t0.00723\t0.00388\t0.00318\t0.00891\n+34\t0.60982\t0.01785\t0.01221\t0.01099\t0.01497\t0.20032\t0.00873\t0.02154\t0.01337\t0.02659\t0.00961\t0.01121\t0.00762\t0.00640\t0.00464\t0.00199\t0.00696\t0.00381\t0.00397\t0.00740\n+35\t0.01709\t0.01413\t0.01514\t0.01328\t0.01703\t0.01603\t0.01041\t0.12845\t0.52909\t0.02997\t0.10922\t0.02678\t0.02435\t0.00951\t0.00694\t0.00222\t0.00535\t0.00791\t0.00688\t0.01022\n+36\t0.01251\t0.00625\t0.00625\t0.00625\t0.00782\t0.00625\t0.00469\t0.01563\t0.01407\t0.02502\t0.02189\t0.02502\t0.01720\t0.00782\t0.00469\t0.00156\t0.00313\t0.00625\t0.80144\t0.00625\n+37\t0.81159\t0.01298\t0.00986\t0.00882\t0.01298\t0.01505\t0.00727\t0.01972\t0.01142\t0.03010\t0.00934\t0.01090\t0.00727\t0.00623\t0.00415\t0.00208\t0.00519\t0.00363\t0.00415\t0.00727\n+38\t0.00912\t0.00666\t0.00858\t0.00849\t0.00989\t0.00611\t0.00622\t0.01179\t0.01753\t0.02436\t0.53808\t0.18741\t0.10998\t0.01537\t0.00804\t0.00224\t0.00332\t0.01362\t0.00708\t0.00611\n+39\t0.02542\t0.02821\t0.01906\t0.01663\t0.02056\t0.55288\t0.01276\t0.16403\t0.02157\t0.05944\t0.01239\t0.01349\t0.00963\t0.00722\t0.00622\t0.00181\t0.01080\t0.00480\t0.00438\t0.00871\n+40\t0.01564\t0.02116\t0.21118\t0.04592\t0.07397\t0.01595\t0.35222\t0.02282\t0.08294\t0.04740\t0.01547\t0.01939\t0.01174\t0.00667\t0.00729\t0.00223\t0.00975\t0.02496\t0.00382\t0.00948\n+41\t0.01281\t0.03680\t0.01288\t0.01270\t0.01495\t0.01047\t0.01093\t0.06006\t0.11342\t0.02243\t0.03222\t0.06254\t0.03330\t0.01610\t0.00859\t0.00285\t0.00617\t0.51737\t0.00618\t0.00721\n+42\t0.02331\t0.01074\t0.01411\t0.01094\t0.01567\t0.00907\t0.00887\t0.02608\t0.01810\t0.46475\t0.14187\t0.02570\t0.02324\t0.00856\t0.00659\t0.00186\t0.00513\t0.00711\t0.00727\t0.17105\n+43\t0.02338\t0.01774\t0.01894\t0.01501\t0.02000\t0.01982\t0.01224\t0.54003\t0.19493\t0.03886\t0.01881\t0.01826\t0.01359\t0.00831\t0.00674\t0.00208\t0.00688\t0.00641\t0.00674\t0.01122\n+44\t0.02496\t0.01852\t0.01983\t0.01533\t0.02060\t0.02055\t0.01262\t0.65842\t0.07399\t0.04140\t0.01681\t0.01667\t0.01198\t0.00812\t0.00672\t0.00203\t0.00725\t0.00614\t0.00672\t0.01136\n+45\t0.02995\t0.01167\t0.01573\t0.01206\t0.01725\t0.01023\t0.00996\t0.05541\t0.01962\t0.70368\t0.02612\t0.02261\t0.01643\t0.00830\t0.00675\t0.00207\t0.00577\t0.00672\t0.00825\t0.01142\n+46\t0.00875\t0.00673\t0.00800\t0.00790\t0.00962\t0.00598\t0.00584\t0.01114\t0.01692\t0.02249\t0.39559\t0.12889\t0.31642\t0.01574\t0.00799\t0.00223\t0.00333\t0.01364\t0.00682\t0.00598\n+47\t0.00887\t0.00653\t0.00831\t0.00852\t0.00981\t0.00596\t0.00614\t0.01121\t0.01655\t0.02265\t0.41661\t0.27844\t0.14262\t0.01647\t0.00812\t0.00233\t0.00343\t0.01461\t0.00687\t0.00596\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t3\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W02B6.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W02CW.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W02CW.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,544 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t160\n+\n+[block]\n+# block no. 0 follows, 29 sequences, length 16\n+# corresponding to MSA columns:\n+# 207-222\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.02504\t0.01956\t0.02001\t0.01612\t0.02114\t0.07615\t0.01329\t0.54430\t0.03024\t0.03968\t0.01924\t0.02483\t0.01556\t0.00987\t0.00741\t0.00226\t0.00807\t0.08936\t0.00678\t0.01109\n+1\t0.01449\t0.08837\t0.62806\t0.01934\t0.02909\t0.01698\t0.02453\t0.02207\t0.01506\t0.02206\t0.01381\t0.01802\t0.01062\t0.00736\t0.00676\t0.00225\t0.01011\t0.03761\t0.00319\t0.01022\n+2\t0.01904\t0.75404\t0.03731\t0.01218\t0.01828\t0.02818\t0.01218\t0.02132\t0.01447\t0.01675\t0.00990\t0.01142\t0.00914\t0.00609\t0.00457\t0.00152\t0.00761\t0.00381\t0.00305\t0.00914\n+3\t0.00868\t0.00620\t0.00826\t0.00991\t0.01033\t0.00578\t0.00661\t0.00991\t0.01363\t0.01818\t0.03925\t0.74510\t0.04710\t0.02231\t0.00909\t0.00289\t0.00413\t0.02024\t0.00661\t0.00578\n+4\t0.00868\t0.00620\t0.00826\t0.00991\t0.01033\t0.00578\t0.00661\t0.00991\t0.01363\t0.01818\t0.03925\t0.74510\t0.04710\t0.02231\t0.00909\t0.00289\t0.00413\t0.02024\t0.00661\t0.00578\n+5\t0.01681\t0.01921\t0.04202\t0.03001\t0.03721\t0.01801\t0.67947\t0.02281\t0.01681\t0.02281\t0.01441\t0.01921\t0.01080\t0.00600\t0.00840\t0.00240\t0.01200\t0.00840\t0.00360\t0.00960\n+6\t0.01696\t0.01259\t0.01499\t0.01082\t0.01704\t0.00962\t0.00870\t0.02007\t0.01548\t0.11090\t0.01463\t0.01597\t0.01145\t0.00573\t0.00551\t0.00120\t0.00537\t0.00459\t0.00481\t0.69357\n+7\t0.80005\t0.01377\t0.01047\t0.00936\t0.01377\t0.01597\t0.00771\t0.02093\t0.01212\t0.03195\t0.00991\t0.01157\t0.00771\t0.00661\t0.00441\t0.00220\t0.00551\t0.00386\t0.00441\t0.00771\n+8\t0.01558\t0.01558\t0.02181\t0.01869\t0.01869\t0.02181\t0.01558\t0.01714\t0.01091\t0.01714\t0.00935\t0.01558\t0.00935\t0.01246\t0.02337\t0.00312\t0.73672\t0.00623\t0.00312\t0.00779\n+9\t0.01008\t0.00728\t0.00952\t0.00896\t0.01064\t0.00672\t0.00672\t0.01344\t0.02016\t0.02855\t0.70158\t0.05319\t0.06719\t0.01456\t0.00840\t0.00224\t0.00336\t0.01288\t0.00784\t0.00672\n+10\t0.01008\t0.00728\t0.00952\t0.00896\t0.01064\t0.00672\t0.00672\t0.01344\t0.02016\t0.02855\t0.70158\t0.05319\t0.06719\t0.01456\t0.00840\t0.00224\t0.00336\t0.01288\t0.00784\t0.00672\n+11\t0.01762\t0.01692\t0.02890\t0.04371\t0.70533\t0.01692\t0.02185\t0.02185\t0.01621\t0.02326\t0.01339\t0.01762\t0.01128\t0.00634\t0.00705\t0.00211\t0.00846\t0.00634\t0.00352\t0.01128\n+12\t0.01428\t0.03683\t0.71286\t0.02030\t0.03082\t0.01654\t0.02631\t0.02255\t0.01503\t0.02255\t0.01278\t0.01503\t0.00902\t0.00677\t0.00677\t0.00226\t0.01052\t0.00526\t0.00301\t0.01052\n+13\t0.01345\t0.01266\t0.02136\t0.73264\t0.04904\t0.01582\t0.01978\t0.01819\t0.01424\t0.01819\t0.01266\t0.01898\t0.00949\t0.00712\t0.00712\t0.00237\t0.00949\t0.00633\t0.00316\t0.00791\n+14\t0.01237\t0.00618\t0.00928\t0.00928\t0.00928\t0.00618\t0.00618\t0.00928\t0.00928\t0.01237\t0.01237\t0.02165\t0.01237\t0.02474\t0.02783\t0.79283\t0.00618\t0.00618\t0.00309\t0.00309\n+15\t0.01729\t0.01658\t0.02830\t0.09873\t0.65291\t0.01683\t0.02169\t0.02156\t0.01606\t0.02286\t0.01334\t0.01773\t0.01114\t0.00641\t0.00706\t0.00214\t0.00854\t0.00634\t0.00350\t0.01101\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t9\n+\n+[block]\n+# block no. 1 follows, 29 sequences, length 54\n+# corresponding to MSA columns:\n+# 232-285\n+name=unknown_B\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01008\t0.00728\t0.00952\t0.00896\t0.01064\t0.00672\t0.00672\t0.01344\t0.02016\t0.02855\t0.70158\t0.05319\t0.06719\t0.01456\t0.00840\t0.00224\t0.00336\t0.01288\t0.00784\t0.00672\n+1\t0.00987\t0.00723\t0.00929\t0.00915\t0.01078\t0.00666\t0.00690\t0.01286\t0.01887\t0.02611\t0.52869\t0.12395\t0.12780\t0.01601\t0.00856\t0.00239\t0.00367\t0.05715\t0.00751\t0.00655\n+2\t0.01524\t0.01448\t0.02459\t0.43724\t0.33045\t0.01629\t0.02067\t0.01976\t0.01509\t0.02037\t0.01297\t0.01840\t0.01026\t0.00679\t0.00709\t0.00226\t0.00905\t0.00634\t0.00332\t0.00935\n+3\t0.01742\t0.01671\t0.02854\t0.07709\t0.67353\t0.01687\t0.02175\t0.02168\t0.01612\t0.02302\t0.01336\t0.01769\t0.01119\t0.00638\t0.00705\t0.00213\t0.00851\t0.00634\t0.00351\t0.01112\n+4\t0.00842\t0.00721\t0.00721\t0.00721\t0.00962\t0.00601\t0.00541\t0.01022\t0.01623\t0.01924\t0.07213\t0.06853\t0.70244\t0.01803\t0.00842\t0.00240\t0.00361\t0.01503\t0.00661'..b'01646\t0.00961\t0.00961\t0.02987\t0.02033\t0.55522\t0.18126\t0.03082\t0.02890\t0.01012\t0.00744\t0.00221\t0.00545\t0.00846\t0.00859\t0.01089\n+6\t0.02707\t0.01995\t0.02137\t0.01638\t0.02208\t0.02208\t0.01353\t0.68159\t0.03348\t0.04488\t0.01710\t0.01710\t0.01211\t0.00855\t0.00712\t0.00214\t0.00784\t0.00641\t0.00712\t0.01211\n+7\t0.01551\t0.01713\t0.03662\t0.02680\t0.03291\t0.01605\t0.57186\t0.02075\t0.01630\t0.02207\t0.01838\t0.13530\t0.01661\t0.00861\t0.00851\t0.00248\t0.01075\t0.01030\t0.00408\t0.00899\n+8\t0.01237\t0.00618\t0.00928\t0.00928\t0.00928\t0.00618\t0.00618\t0.00928\t0.00928\t0.01237\t0.01237\t0.02165\t0.01237\t0.02474\t0.02783\t0.79283\t0.00618\t0.00618\t0.00309\t0.00309\n+9\t0.01762\t0.01692\t0.02890\t0.04371\t0.70533\t0.01692\t0.02185\t0.02185\t0.01621\t0.02326\t0.01339\t0.01762\t0.01128\t0.00634\t0.00705\t0.00211\t0.00846\t0.00634\t0.00352\t0.01128\n+10\t0.02707\t0.01995\t0.02137\t0.01638\t0.02208\t0.02208\t0.01353\t0.68159\t0.03348\t0.04488\t0.01710\t0.01710\t0.01211\t0.00855\t0.00712\t0.00214\t0.00784\t0.00641\t0.00712\t0.01211\n+11\t0.01681\t0.01921\t0.04202\t0.03001\t0.03721\t0.01801\t0.67947\t0.02281\t0.01681\t0.02281\t0.01441\t0.01921\t0.01080\t0.00600\t0.00840\t0.00240\t0.01200\t0.00840\t0.00360\t0.00960\n+12\t0.01036\t0.00690\t0.00777\t0.00777\t0.00777\t0.00690\t0.00431\t0.01036\t0.01036\t0.01381\t0.02244\t0.04660\t0.02589\t0.74975\t0.03624\t0.00690\t0.00690\t0.01036\t0.00431\t0.00431\n+13\t0.01904\t0.75404\t0.03731\t0.01218\t0.01828\t0.02818\t0.01218\t0.02132\t0.01447\t0.01675\t0.00990\t0.01142\t0.00914\t0.00609\t0.00457\t0.00152\t0.00761\t0.00381\t0.00305\t0.00914\n+14\t0.01904\t0.75404\t0.03731\t0.01218\t0.01828\t0.02818\t0.01218\t0.02132\t0.01447\t0.01675\t0.00990\t0.01142\t0.00914\t0.00609\t0.00457\t0.00152\t0.00761\t0.00381\t0.00305\t0.00914\n+15\t0.02707\t0.01995\t0.02137\t0.01638\t0.02208\t0.02208\t0.01353\t0.68159\t0.03348\t0.04488\t0.01710\t0.01710\t0.01211\t0.00855\t0.00712\t0.00214\t0.00784\t0.00641\t0.00712\t0.01211\n+16\t0.01472\t0.10324\t0.65031\t0.01954\t0.02966\t0.01761\t0.02500\t0.02244\t0.01498\t0.02201\t0.01251\t0.01470\t0.00903\t0.00670\t0.00656\t0.00219\t0.01025\t0.00513\t0.00301\t0.01040\n+17\t0.01552\t0.22313\t0.53738\t0.01819\t0.02756\t0.01956\t0.02264\t0.02223\t0.01489\t0.02104\t0.01203\t0.01410\t0.00905\t0.00659\t0.00619\t0.00206\t0.00977\t0.00488\t0.00302\t0.01016\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t1\n+\n+[block]\n+# block no. 10 follows, 29 sequences, length 9\n+# corresponding to MSA columns:\n+# 1173-1181\n+name=unknown_K\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01771\t0.01530\t0.01610\t0.01449\t0.01852\t0.01771\t0.01127\t0.03784\t0.69247\t0.02979\t0.02898\t0.02657\t0.02174\t0.00966\t0.00725\t0.00242\t0.00564\t0.00805\t0.00725\t0.01127\n+1\t0.01904\t0.75404\t0.03731\t0.01218\t0.01828\t0.02818\t0.01218\t0.02132\t0.01447\t0.01675\t0.00990\t0.01142\t0.00914\t0.00609\t0.00457\t0.00152\t0.00761\t0.00381\t0.00305\t0.00914\n+2\t0.14537\t0.03084\t0.01869\t0.01697\t0.02075\t0.61287\t0.01283\t0.02728\t0.01894\t0.01966\t0.01084\t0.01265\t0.00895\t0.00723\t0.00611\t0.00189\t0.01172\t0.00447\t0.00378\t0.00817\n+3\t0.01342\t0.03213\t0.60466\t0.01870\t0.02767\t0.01489\t0.02328\t0.02061\t0.01482\t0.02188\t0.01684\t0.12714\t0.01487\t0.00915\t0.00712\t0.00235\t0.00954\t0.00756\t0.00356\t0.00980\n+4\t0.01237\t0.00618\t0.00928\t0.00928\t0.00928\t0.00618\t0.00618\t0.00928\t0.00928\t0.01237\t0.01237\t0.02165\t0.01237\t0.02474\t0.02783\t0.79283\t0.00618\t0.00618\t0.00309\t0.00309\n+5\t0.01838\t0.01857\t0.02748\t0.08164\t0.58994\t0.09575\t0.02082\t0.02237\t0.01654\t0.02231\t0.01308\t0.01717\t0.01094\t0.00650\t0.00698\t0.00210\t0.00901\t0.00615\t0.00352\t0.01074\n+6\t0.42985\t0.01475\t0.01969\t0.09547\t0.02366\t0.01565\t0.16637\t0.02143\t0.01404\t0.05767\t0.01231\t0.01501\t0.00931\t0.00651\t0.00584\t0.00217\t0.00748\t0.00537\t0.00426\t0.07316\n+7\t0.01428\t0.03683\t0.71286\t0.02030\t0.03082\t0.01654\t0.02631\t0.02255\t0.01503\t0.02255\t0.01278\t0.01503\t0.00902\t0.00677\t0.00677\t0.00226\t0.01052\t0.00526\t0.00301\t0.01052\n+8\t0.05407\t0.02350\t0.02495\t0.01979\t0.02462\t0.28921\t0.18632\t0.07805\t0.01847\t0.02248\t0.01243\t0.01531\t0.00998\t0.00723\t0.00827\t0.00203\t0.07589\t0.00580\t0.00399\t0.11760\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+7\t701\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W02CW.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W04UC.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W04UC.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,491 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t186\n+\n+[block]\n+# block no. 0 follows, 39 sequences, length 75\n+# corresponding to MSA columns:\n+# 186-260\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.00837\t0.00604\t0.00790\t0.00744\t0.00883\t0.00558\t0.00558\t0.01116\t0.01674\t0.02371\t0.75216\t0.04417\t0.05580\t0.01209\t0.00697\t0.00186\t0.00279\t0.01069\t0.00651\t0.00558\n+1\t0.02139\t0.01412\t0.01577\t0.01231\t0.01646\t0.01518\t0.01000\t0.52412\t0.02357\t0.15588\t0.01618\t0.01765\t0.01199\t0.07475\t0.04069\t0.00245\t0.00659\t0.00575\t0.00584\t0.00931\n+2\t0.00845\t0.00634\t0.00950\t0.00950\t0.01056\t0.00739\t0.00739\t0.01056\t0.00950\t0.01373\t0.01584\t0.02323\t0.01478\t0.04435\t0.76873\t0.00950\t0.01584\t0.00634\t0.00317\t0.00528\n+3\t0.01052\t0.00620\t0.00723\t0.00689\t0.00737\t0.00605\t0.00413\t0.01076\t0.00949\t0.09143\t0.01914\t0.03671\t0.02077\t0.70825\t0.02752\t0.00532\t0.00566\t0.00832\t0.00398\t0.00428\n+4\t0.00848\t0.00621\t0.00885\t0.00885\t0.00967\t0.00703\t0.00657\t0.01014\t0.00931\t0.01324\t0.01644\t0.02657\t0.01623\t0.20554\t0.60952\t0.00869\t0.01366\t0.00682\t0.00326\t0.00491\n+5\t0.01999\t0.10518\t0.01781\t0.01383\t0.01719\t0.50346\t0.03636\t0.09555\t0.01684\t0.01775\t0.01075\t0.01231\t0.00872\t0.00613\t0.00516\t0.00152\t0.00890\t0.00419\t0.09117\t0.00716\n+6\t0.10193\t0.01066\t0.01231\t0.00916\t0.01394\t0.00900\t0.00741\t0.01687\t0.01247\t0.11221\t0.01175\t0.01299\t0.00920\t0.00512\t0.00514\t0.00117\t0.03782\t0.00385\t0.00396\t0.60304\n+7\t0.01550\t0.66974\t0.12633\t0.01117\t0.01665\t0.04702\t0.01170\t0.01804\t0.01224\t0.01456\t0.00857\t0.00992\t0.00758\t0.00517\t0.00409\t0.00135\t0.00679\t0.00334\t0.00254\t0.00772\n+8\t0.00837\t0.00604\t0.00790\t0.00744\t0.00883\t0.00558\t0.00558\t0.01116\t0.01674\t0.02371\t0.75216\t0.04417\t0.05580\t0.01209\t0.00697\t0.00186\t0.00279\t0.01069\t0.00651\t0.00558\n+9\t0.83394\t0.01144\t0.00869\t0.00778\t0.01144\t0.01327\t0.00640\t0.01738\t0.01006\t0.02653\t0.00823\t0.00961\t0.00640\t0.00549\t0.00366\t0.00183\t0.00457\t0.00320\t0.00366\t0.00640\n+10\t0.02209\t0.02819\t0.01676\t0.01524\t0.01828\t0.76843\t0.01143\t0.02361\t0.01676\t0.01447\t0.00914\t0.01066\t0.00762\t0.00609\t0.00533\t0.00152\t0.01066\t0.00381\t0.00305\t0.00686\n+11\t0.00860\t0.00573\t0.00645\t0.00645\t0.00645\t0.00573\t0.00358\t0.00860\t0.00860\t0.01147\t0.01863\t0.03870\t0.02150\t0.79217\t0.03010\t0.00573\t0.00573\t0.00860\t0.00358\t0.00358\n+12\t0.01294\t0.01294\t0.01811\t0.01553\t0.01553\t0.01811\t0.01294\t0.01423\t0.00906\t0.01423\t0.00776\t0.01294\t0.00776\t0.01035\t0.01941\t0.00259\t0.78134\t0.00518\t0.00259\t0.00647\n+13\t0.00845\t0.00634\t0.00950\t0.00950\t0.01056\t0.00739\t0.00739\t0.01056\t0.00950\t0.01373\t0.01584\t0.02323\t0.01478\t0.04435\t0.76873\t0.00950\t0.01584\t0.00634\t0.00317\t0.00528\n+14\t0.83394\t0.01144\t0.00869\t0.00778\t0.01144\t0.01327\t0.00640\t0.01738\t0.01006\t0.02653\t0.00823\t0.00961\t0.00640\t0.00549\t0.00366\t0.00183\t0.00457\t0.00320\t0.00366\t0.00640\n+15\t0.01367\t0.01055\t0.01238\t0.00919\t0.01409\t0.00853\t0.00734\t0.01759\t0.08146\t0.08653\t0.03373\t0.01478\t0.01148\t0.00520\t0.00475\t0.00110\t0.00442\t0.00422\t0.00417\t0.65481\n+16\t0.81340\t0.01129\t0.00861\t0.00772\t0.01132\t0.01307\t0.00635\t0.01729\t0.01012\t0.02642\t0.00851\t0.00992\t0.00662\t0.00552\t0.00367\t0.00182\t0.00453\t0.00326\t0.02416\t0.00638\n+17\t0.01294\t0.01294\t0.01811\t0.01553\t0.01553\t0.01811\t0.01294\t0.01423\t0.00906\t0.01423\t0.00776\t0.01294\t0.00776\t0.01035\t0.01941\t0.00259\t0.78134\t0.00518\t0.00259\t0.00647\n+18\t0.01226\t0.01051\t0.01226\t0.00876\t0.01401\t0.00788\t0.00701\t0.01489\t0.01226\t0.01927\t0.01051\t0.01226\t0.00876\t0.00438\t0.00438\t0.00088\t0.00438\t0.00350\t0.00350\t0.82832\n+19\t0.00953\t0.00681\t0.00953\t0.01089\t0.01225\t0.00681\t0.00953\t0.01225\t0.01361\t0.01770\t0.03131\t0.06671\t0.03403\t0.01634\t0.00817\t0.00272\t0.00545\t0.71547\t0.00545\t0.00545\n+20\t0.01464\t0.01405\t0.02400\t0.03630\t0.75528\t0.01405\t0.01815\t0.01815\t0.01347\t0.01932\t0.01112\t0.01464\t0.00937\t0.00527\t0.00585\t0.00176\t0.00703\t0.00527\t0.00293\t0.00937\n+21\t0.01226\t0.01051\t0.01226\t0.00876\t0.01401\t0.00788\t0.00701\t0.01489\t0.01226\t0.01927\t0.01051\t0.01226\t0.00876\t0.00438\t0.00438\t0.00088\t0.00438\t0.00350\t0.00350\t0.82832\n+22\t0.01307\t0.01334\t0.02034\t0.01678\t0.01757\t0.01769\t0.10876\t0.01486\t0.00971\t0.01486\t0.00832\t0'..b'01346\t0.00801\t0.08378\t0.01541\t0.04654\t0.13383\t0.09821\t0.04324\t0.23075\t0.01184\t0.00722\t0.00209\t0.02290\t0.18362\t0.00544\t0.04993\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t1\n+\n+[block]\n+# block no. 4 follows, 39 sequences, length 21\n+# corresponding to MSA columns:\n+# 594-614\n+name=unknown_E\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01386\t0.04719\t0.04956\t0.02101\t0.04969\t0.01413\t0.49127\t0.01898\t0.05735\t0.03678\t0.05888\t0.01747\t0.01245\t0.00579\t0.00683\t0.00189\t0.02742\t0.00662\t0.00348\t0.05935\n+1\t0.01594\t0.08285\t0.15448\t0.08086\t0.02287\t0.01293\t0.21191\t0.03551\t0.02797\t0.18848\t0.01684\t0.04818\t0.03750\t0.02889\t0.00677\t0.00199\t0.00733\t0.00638\t0.00415\t0.00816\n+2\t0.01350\t0.43535\t0.29835\t0.01242\t0.01837\t0.01800\t0.01399\t0.01715\t0.01212\t0.01581\t0.01150\t0.08730\t0.01066\t0.00659\t0.00484\t0.00160\t0.00693\t0.00495\t0.00281\t0.00774\n+3\t0.01232\t0.04691\t0.46276\t0.01405\t0.02036\t0.01243\t0.01621\t0.01927\t0.11757\t0.05457\t0.01860\t0.08858\t0.05901\t0.00802\t0.00595\t0.00195\t0.00699\t0.02250\t0.00376\t0.00819\n+4\t0.01581\t0.79572\t0.03099\t0.01012\t0.01518\t0.02340\t0.01012\t0.01771\t0.01202\t0.01391\t0.00822\t0.00949\t0.00759\t0.00506\t0.00379\t0.00126\t0.00632\t0.00316\t0.00253\t0.00759\n+5\t0.01449\t0.01334\t0.02057\t0.15591\t0.48183\t0.04885\t0.01593\t0.04471\t0.01386\t0.04296\t0.01332\t0.06776\t0.01176\t0.00668\t0.00601\t0.00185\t0.00698\t0.02139\t0.00337\t0.00844\n+6\t0.00961\t0.00801\t0.01154\t0.15249\t0.03484\t0.00842\t0.04172\t0.01293\t0.05812\t0.01710\t0.04600\t0.20057\t0.16220\t0.01270\t0.00721\t0.00220\t0.02250\t0.14725\t0.03867\t0.00591\n+7\t0.00810\t0.00603\t0.00753\t0.00716\t0.00867\t0.00547\t0.00537\t0.01064\t0.01611\t0.02221\t0.61793\t0.04664\t0.19096\t0.01265\t0.00698\t0.00189\t0.00283\t0.01104\t0.00631\t0.00547\n+8\t0.01226\t0.10705\t0.68852\t0.01618\t0.02455\t0.01470\t0.02068\t0.01863\t0.01244\t0.01825\t0.01037\t0.01219\t0.00750\t0.00556\t0.00544\t0.00181\t0.00850\t0.00425\t0.00250\t0.00862\n+9\t0.01574\t0.01091\t0.01374\t0.01163\t0.07766\t0.00891\t0.00844\t0.04089\t0.01382\t0.17310\t0.01333\t0.01416\t0.01007\t0.00515\t0.00488\t0.00118\t0.00481\t0.00422\t0.00432\t0.56303\n+10\t0.05239\t0.01350\t0.01726\t0.02017\t0.28855\t0.09039\t0.01210\t0.02170\t0.03813\t0.24141\t0.03905\t0.01658\t0.01237\t0.00618\t0.00560\t0.00166\t0.00618\t0.00525\t0.00457\t0.10696\n+11\t0.02167\t0.02698\t0.01655\t0.01502\t0.01807\t0.71240\t0.01135\t0.05116\t0.01708\t0.01548\t0.01011\t0.01276\t0.00864\t0.00649\t0.00545\t0.00158\t0.01032\t0.02871\t0.00324\t0.00693\n+12\t0.01186\t0.03059\t0.76153\t0.01686\t0.02560\t0.01373\t0.02185\t0.01873\t0.01249\t0.01873\t0.01061\t0.01249\t0.00749\t0.00562\t0.00562\t0.00187\t0.00874\t0.00437\t0.00250\t0.00874\n+13\t0.00857\t0.00586\t0.00709\t0.00709\t0.00731\t0.00608\t0.00438\t0.00901\t0.00879\t0.01194\t0.01805\t0.03546\t0.02009\t0.63556\t0.18478\t0.00652\t0.00785\t0.00813\t0.00350\t0.00394\n+14\t0.00848\t0.00623\t0.00895\t0.00895\t0.00982\t0.00709\t0.00670\t0.01021\t0.00934\t0.01332\t0.01635\t0.02604\t0.01600\t0.17986\t0.63489\t0.00882\t0.01401\t0.00675\t0.00324\t0.00497\n+15\t0.03991\t0.43951\t0.06160\t0.01247\t0.01744\t0.10014\t0.05930\t0.12803\t0.01530\t0.06143\t0.01047\t0.01152\t0.00843\t0.00564\t0.00470\t0.00150\t0.00706\t0.00404\t0.00344\t0.00808\n+16\t0.70509\t0.13495\t0.01220\t0.00815\t0.01203\t0.01486\t0.00699\t0.01743\t0.01037\t0.02455\t0.00823\t0.00959\t0.00659\t0.00542\t0.00368\t0.00174\t0.00485\t0.00320\t0.00348\t0.00659\n+17\t0.01538\t0.52007\t0.24277\t0.01211\t0.01821\t0.01960\t0.01344\t0.01875\t0.01248\t0.06526\t0.00993\t0.01107\t0.00803\t0.00537\t0.00447\t0.00148\t0.00694\t0.00370\t0.00284\t0.00809\n+18\t0.01569\t0.01697\t0.06292\t0.06089\t0.47851\t0.12492\t0.09596\t0.01923\t0.01398\t0.03836\t0.01120\t0.01428\t0.00905\t0.00546\t0.00589\t0.00177\t0.00796\t0.00521\t0.00304\t0.00871\n+19\t0.01523\t0.74276\t0.02937\t0.00999\t0.01474\t0.02215\t0.00981\t0.01707\t0.01197\t0.01399\t0.00985\t0.06166\t0.00970\t0.00596\t0.00405\t0.00134\t0.00613\t0.00408\t0.00273\t0.00740\n+20\t0.01689\t0.02031\t0.02771\t0.02107\t0.02578\t0.28989\t0.44583\t0.02049\t0.01481\t0.01715\t0.01079\t0.01392\t0.00844\t0.00557\t0.00680\t0.00184\t0.03642\t0.00576\t0.00300\t0.00752\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t57\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W04UC.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W06CL.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W06CL.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,521 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t7\n+\n+[block]\n+# block no. 0 follows, 35 sequences, length 11\n+# corresponding to MSA columns:\n+# 7-17\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01022\t0.00730\t0.01022\t0.01168\t0.01314\t0.00730\t0.01022\t0.01314\t0.01460\t0.01899\t0.03359\t0.07156\t0.03651\t0.01752\t0.00876\t0.00292\t0.00584\t0.69478\t0.00584\t0.00584\n+1\t0.00761\t0.00630\t0.00656\t0.00674\t0.00857\t0.00537\t0.00490\t0.00908\t0.01393\t0.01680\t0.05862\t0.14688\t0.61711\t0.05219\t0.00873\t0.00238\t0.00341\t0.01376\t0.00579\t0.00526\n+2\t0.01372\t0.10227\t0.63944\t0.01722\t0.02600\t0.01597\t0.02166\t0.05646\t0.01421\t0.02065\t0.01135\t0.01319\t0.00819\t0.00605\t0.00586\t0.00194\t0.00901\t0.00462\t0.00287\t0.00933\n+3\t0.00910\t0.00666\t0.00727\t0.00711\t0.00923\t0.00567\t0.00533\t0.01086\t0.01488\t0.06758\t0.12618\t0.11345\t0.56318\t0.01550\t0.00747\t0.00215\t0.00338\t0.01309\t0.00613\t0.00578\n+4\t0.01699\t0.03773\t0.01751\t0.06292\t0.10823\t0.06115\t0.02803\t0.13098\t0.31901\t0.04597\t0.06928\t0.02217\t0.03564\t0.00811\t0.00641\t0.00201\t0.00625\t0.00680\t0.00548\t0.00934\n+5\t0.02680\t0.01043\t0.01419\t0.01101\t0.01562\t0.00904\t0.00904\t0.02930\t0.01814\t0.68087\t0.08540\t0.02379\t0.01946\t0.00829\t0.00647\t0.00197\t0.00519\t0.00681\t0.00778\t0.01039\n+6\t0.01627\t0.01568\t0.02389\t0.13421\t0.54922\t0.06107\t0.01826\t0.06717\t0.01548\t0.02111\t0.01194\t0.01557\t0.00977\t0.00594\t0.00626\t0.00190\t0.00787\t0.00556\t0.00332\t0.00952\n+7\t0.00782\t0.00556\t0.00733\t0.00872\t0.00906\t0.00521\t0.00577\t0.00886\t0.01197\t0.01596\t0.03407\t0.72903\t0.04082\t0.06530\t0.00955\t0.00279\t0.00383\t0.01751\t0.00577\t0.00507\n+8\t0.00904\t0.00704\t0.00835\t0.00857\t0.01017\t0.00673\t0.00638\t0.01273\t0.09134\t0.02017\t0.22208\t0.24355\t0.24670\t0.01559\t0.00764\t0.00228\t0.00368\t0.06572\t0.00623\t0.00601\n+9\t0.13445\t0.01459\t0.01735\t0.31364\t0.08409\t0.10218\t0.01401\t0.02039\t0.11834\t0.01973\t0.01262\t0.01586\t0.00991\t0.00709\t0.00749\t0.00209\t0.08948\t0.00535\t0.00359\t0.00773\n+10\t0.56839\t0.07491\t0.01285\t0.03475\t0.01464\t0.05539\t0.00821\t0.02078\t0.01251\t0.13149\t0.01136\t0.01225\t0.00840\t0.00619\t0.00448\t0.00190\t0.00561\t0.00398\t0.00433\t0.00758\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t2\n+\n+[block]\n+# block no. 1 follows, 35 sequences, length 19\n+# corresponding to MSA columns:\n+# 20-38\n+name=unknown_B\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.02163\t0.01373\t0.01596\t0.01229\t0.01718\t0.01365\t0.01004\t0.26978\t0.08565\t0.23192\t0.01782\t0.01726\t0.01256\t0.00716\t0.00636\t0.00173\t0.02663\t0.00555\t0.00605\t0.20705\n+1\t0.00953\t0.00732\t0.00883\t0.00837\t0.01018\t0.00706\t0.00629\t0.01407\t0.10400\t0.02392\t0.51584\t0.07219\t0.16194\t0.01317\t0.00738\t0.00206\t0.00330\t0.01148\t0.00671\t0.00635\n+2\t0.00993\t0.00762\t0.00935\t0.00927\t0.01019\t0.04114\t0.00673\t0.01154\t0.01044\t0.01456\t0.01775\t0.02911\t0.01765\t0.25757\t0.46436\t0.00812\t0.01276\t0.00734\t0.04935\t0.00522\n+3\t0.01150\t0.00670\t0.00849\t0.00861\t0.00989\t0.00618\t0.00602\t0.01275\t0.01297\t0.13158\t0.05834\t0.35873\t0.10466\t0.19176\t0.01334\t0.00325\t0.00453\t0.03909\t0.00577\t0.00583\n+4\t0.01892\t0.01270\t0.01420\t0.01132\t0.01565\t0.01282\t0.00911\t0.22309\t0.15479\t0.13654\t0.01871\t0.01864\t0.01370\t0.00717\t0.00572\t0.00169\t0.00526\t0.00570\t0.12950\t0.18478\n+5\t0.74376\t0.01347\t0.01022\t0.00905\t0.01299\t0.05354\t0.00739\t0.05033\t0.01203\t0.02829\t0.00917\t0.01059\t0.00712\t0.00600\t0.00413\t0.00194\t0.00535\t0.00357\t0.00400\t0.00707\n+6\t0.01306\t0.09164\t0.68828\t0.01751\t0.02658\t0.01555\t0.02245\t0.02000\t0.01335\t0.01968\t0.01118\t0.01314\t0.00804\t0.00598\t0.00587\t0.00196\t0.00917\t0.00459\t0.00268\t0.00928\n+7\t0.01546\t0.01337\t0.01416\t0.15006\t0.01988\t0.12549\t0.01069\t0.04401\t0.15272\t0.08214\t0.18192\t0.02828\t0.04695\t0.00940\t0.00705\t0.00204\t0.02888\t0.03514\t0.02462\t0.00773\n+8\t0.00836\t0.00641\t0.00766\t0.00746\t0.00913\t0.00571\t0.00555\t0.01073\t0.01633\t0.02185\t0.44706\t0.09416\t0.30759\t0.01451\t0.00752\t0.00208\t0.00311\t0.01256\t0.00652\t0.00571\n+9\t0.01186\t0.02659\t0.56151\t0.01604\t0.02366\t0.01282\t0.04173\t0.01810\t0.01415\t0.02058\t0.11354\t0.02202\t0.07466\t0.00777\t0.00639\t0.00202\t0.00805\t0.00641\t0.00354\t0.00856\n+10'..b'692\t0.11307\t0.01355\t0.15521\t0.16627\t0.04339\t0.01850\t0.01957\t0.05355\t0.03809\t0.00713\t0.00208\t0.00739\t0.00600\t0.00464\t0.00904\n+12\t0.00790\t0.00603\t0.00727\t0.00795\t0.00913\t0.00541\t0.00565\t0.00950\t0.01386\t0.01791\t0.14400\t0.39862\t0.28882\t0.01749\t0.00782\t0.00235\t0.00348\t0.03541\t0.00604\t0.00536\n+13\t0.01740\t0.26794\t0.07201\t0.01232\t0.01748\t0.13266\t0.01112\t0.07272\t0.01515\t0.04301\t0.01089\t0.01239\t0.00897\t0.00590\t0.00557\t0.00144\t0.03716\t0.00406\t0.00356\t0.24826\n+14\t0.00811\t0.00645\t0.00728\t0.00707\t0.00895\t0.00562\t0.00531\t0.01030\t0.01592\t0.02059\t0.34300\t0.05537\t0.45402\t0.01478\t0.00749\t0.00208\t0.00312\t0.01259\t0.00635\t0.00562\n+15\t0.01272\t0.03281\t0.74418\t0.01808\t0.02746\t0.01473\t0.02344\t0.02009\t0.01339\t0.02009\t0.01138\t0.01339\t0.00804\t0.00603\t0.00603\t0.00201\t0.00938\t0.00469\t0.00268\t0.00938\n+16\t0.01578\t0.01363\t0.01434\t0.01291\t0.01650\t0.01578\t0.01004\t0.03371\t0.72602\t0.02654\t0.02582\t0.02367\t0.01937\t0.00861\t0.00646\t0.00215\t0.00502\t0.00717\t0.00646\t0.01004\n+17\t0.01044\t0.00761\t0.01083\t0.01275\t0.04160\t0.00761\t0.01059\t0.01339\t0.01460\t0.01905\t0.03274\t0.06936\t0.03547\t0.01706\t0.00866\t0.00288\t0.00591\t0.66771\t0.00574\t0.00601\n+18\t0.00882\t0.00674\t0.00815\t0.00787\t0.00962\t0.00618\t0.00599\t0.01187\t0.03901\t0.02269\t0.47764\t0.05194\t0.25622\t0.01398\t0.00752\t0.00209\t0.00327\t0.04787\t0.00658\t0.00592\n+19\t0.01102\t0.00551\t0.00826\t0.00826\t0.00826\t0.00551\t0.00551\t0.00826\t0.00826\t0.01102\t0.01102\t0.01928\t0.01102\t0.02204\t0.02479\t0.81543\t0.00551\t0.00551\t0.00275\t0.00275\n+20\t0.02093\t0.34170\t0.02443\t0.01390\t0.01823\t0.38335\t0.01166\t0.08473\t0.01692\t0.01747\t0.00988\t0.01125\t0.00839\t0.00617\t0.00509\t0.00154\t0.00910\t0.00394\t0.00331\t0.00799\n+21\t0.00886\t0.00637\t0.00817\t0.00923\t0.00993\t0.00616\t0.00632\t0.05773\t0.01337\t0.01784\t0.03360\t0.72054\t0.03980\t0.01903\t0.00798\t0.00253\t0.00391\t0.01718\t0.00592\t0.00554\n+22\t0.01287\t0.01097\t0.01295\t0.00945\t0.01478\t0.00842\t0.00755\t0.01565\t0.01295\t0.02026\t0.01167\t0.01397\t0.00984\t0.00766\t0.05635\t0.00158\t0.00555\t0.00397\t0.00373\t0.75983\n+23\t0.00807\t0.00631\t0.00732\t0.00735\t0.00900\t0.00556\t0.00540\t0.01011\t0.01540\t0.02004\t0.30532\t0.16115\t0.38532\t0.01549\t0.00758\t0.00215\t0.00320\t0.01337\t0.00629\t0.00556\n+24\t0.01703\t0.01695\t0.02148\t0.07718\t0.14139\t0.13261\t0.10363\t0.05887\t0.13956\t0.04149\t0.01388\t0.01645\t0.01105\t0.00766\t0.00951\t0.00214\t0.17067\t0.00591\t0.00395\t0.00860\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t1\n+\n+[block]\n+# block no. 13 follows, 35 sequences, length 8\n+# corresponding to MSA columns:\n+# 480-487\n+name=unknown_N\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.00763\t0.00627\t0.00672\t0.00694\t0.00874\t0.00536\t0.00508\t0.00924\t0.01428\t0.01749\t0.10103\t0.18393\t0.57228\t0.01653\t0.00760\t0.00221\t0.00328\t0.01408\t0.00596\t0.00536\n+1\t0.00986\t0.00795\t0.01140\t0.01099\t0.01177\t0.00968\t0.00852\t0.01169\t0.01016\t0.01472\t0.01694\t0.07717\t0.01695\t0.10254\t0.50300\t0.00795\t0.15194\t0.00757\t0.00350\t0.00570\n+2\t0.01747\t0.01263\t0.01460\t0.01085\t0.01619\t0.01117\t0.00879\t0.16011\t0.05042\t0.11817\t0.01453\t0.01516\t0.01096\t0.00588\t0.00533\t0.00132\t0.00526\t0.00465\t0.00494\t0.51155\n+3\t0.01891\t0.01343\t0.01481\t0.01274\t0.01670\t0.01486\t0.01007\t0.09012\t0.53204\t0.16499\t0.02478\t0.02257\t0.01795\t0.00838\t0.00643\t0.00209\t0.00526\t0.00690\t0.00671\t0.01025\n+4\t0.01661\t0.01436\t0.01288\t0.01185\t0.01478\t0.17084\t0.00909\t0.02351\t0.23976\t0.11662\t0.05064\t0.12504\t0.11552\t0.01102\t0.00677\t0.00210\t0.00602\t0.03880\t0.00579\t0.00801\n+5\t0.01413\t0.01093\t0.01276\t0.00963\t0.01461\t0.00890\t0.00766\t0.01826\t0.08023\t0.08139\t0.05137\t0.01941\t0.05791\t0.00642\t0.00531\t0.00126\t0.00461\t0.00525\t0.00464\t0.58532\n+6\t0.01456\t0.01089\t0.01500\t0.01404\t0.08808\t0.00994\t0.05875\t0.04858\t0.07411\t0.10909\t0.05713\t0.17066\t0.05353\t0.00963\t0.00642\t0.00182\t0.00527\t0.00856\t0.00517\t0.23877\n+7\t0.01612\t0.01490\t0.04899\t0.04713\t0.02409\t0.04490\t0.30085\t0.01991\t0.01458\t0.12169\t0.01534\t0.06975\t0.01250\t0.00697\t0.00723\t0.00189\t0.04287\t0.00688\t0.00412\t0.17928\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+8\t16\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W06CL.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W06HU.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W06HU.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,464 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+13\t36\n+\n+[block]\n+# block no. 0 follows, 32 sequences, length 73\n+# corresponding to MSA columns:\n+# 75-147\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01405\t0.09379\t0.60732\t0.01935\t0.02863\t0.01662\t0.08683\t0.02118\t0.01428\t0.02082\t0.01196\t0.01425\t0.00867\t0.00625\t0.00635\t0.00208\t0.00982\t0.00512\t0.00289\t0.00973\n+1\t0.01468\t0.01398\t0.02376\t0.38709\t0.39148\t0.01544\t0.01963\t0.01890\t0.01437\t0.01958\t0.01228\t0.01723\t0.00980\t0.00634\t0.00667\t0.00211\t0.00845\t0.00597\t0.00316\t0.00907\n+2\t0.01423\t0.01352\t0.02295\t0.46762\t0.31445\t0.01532\t0.01941\t0.01851\t0.01416\t0.01904\t0.01220\t0.01738\t0.00961\t0.00642\t0.00668\t0.00214\t0.00856\t0.00597\t0.00312\t0.00871\n+3\t0.02322\t0.01671\t0.01825\t0.01434\t0.01911\t0.01826\t0.01171\t0.55320\t0.05927\t0.06922\t0.08368\t0.04555\t0.01804\t0.00909\t0.00690\t0.00206\t0.00670\t0.00716\t0.00683\t0.01069\n+4\t0.01402\t0.13590\t0.56510\t0.08642\t0.02899\t0.01706\t0.02234\t0.02070\t0.01402\t0.02009\t0.01165\t0.01404\t0.00856\t0.00632\t0.00611\t0.00204\t0.00944\t0.00486\t0.00285\t0.00950\n+5\t0.00818\t0.00603\t0.00759\t0.00882\t0.00954\t0.00552\t0.00596\t0.00941\t0.01320\t0.01719\t0.04219\t0.61169\t0.16730\t0.04204\t0.00920\t0.00275\t0.00388\t0.01790\t0.00617\t0.00545\n+6\t0.00928\t0.07820\t0.01005\t0.00774\t0.01010\t0.00779\t0.00605\t0.01138\t0.01600\t0.02012\t0.22818\t0.07889\t0.46238\t0.01523\t0.00761\t0.00216\t0.00371\t0.01281\t0.00621\t0.00610\n+7\t0.01363\t0.00827\t0.00874\t0.00842\t0.01051\t0.00872\t0.00658\t0.05219\t0.12238\t0.02587\t0.02372\t0.02933\t0.01943\t0.00903\t0.00555\t0.00184\t0.00396\t0.06938\t0.56529\t0.00717\n+8\t0.01354\t0.01308\t0.02298\t0.57865\t0.14264\t0.01525\t0.08263\t0.01805\t0.01391\t0.01824\t0.01218\t0.01772\t0.00930\t0.00650\t0.00681\t0.00220\t0.00903\t0.00615\t0.00307\t0.00806\n+9\t0.08580\t0.00769\t0.00927\t0.00855\t0.01064\t0.00730\t0.00653\t0.01425\t0.01801\t0.06689\t0.56220\t0.04598\t0.10592\t0.01296\t0.00750\t0.00212\t0.00352\t0.01118\t0.00705\t0.00666\n+10\t0.01631\t0.01770\t0.09310\t0.03912\t0.65731\t0.01591\t0.02099\t0.02065\t0.01517\t0.02186\t0.01257\t0.01638\t0.01043\t0.00602\t0.00662\t0.00201\t0.00815\t0.00588\t0.00328\t0.01056\n+11\t0.00943\t0.00715\t0.01041\t0.01041\t0.01171\t0.00813\t0.00808\t0.01176\t0.01121\t0.01582\t0.02266\t0.02994\t0.08270\t0.04720\t0.66916\t0.00998\t0.01661\t0.00784\t0.00384\t0.00596\n+12\t0.15848\t0.00816\t0.00786\t0.00754\t0.00969\t0.00862\t0.00577\t0.05524\t0.01448\t0.02620\t0.02068\t0.09085\t0.01760\t0.00878\t0.00507\t0.00179\t0.00382\t0.00697\t0.53573\t0.00666\n+13\t0.02420\t0.03068\t0.02094\t0.01832\t0.02209\t0.66969\t0.07721\t0.02630\t0.01872\t0.01690\t0.01067\t0.01266\t0.00879\t0.00680\t0.00623\t0.00178\t0.01203\t0.00466\t0.00345\t0.00790\n+14\t0.01854\t0.01787\t0.01667\t0.01479\t0.01826\t0.14742\t0.01155\t0.07162\t0.47949\t0.02569\t0.02185\t0.02120\t0.01671\t0.00889\t0.00811\t0.00222\t0.07669\t0.00674\t0.00585\t0.00985\n+15\t0.01023\t0.00636\t0.00852\t0.00959\t0.01043\t0.00586\t0.00657\t0.01153\t0.01344\t0.08371\t0.03600\t0.69069\t0.04177\t0.01983\t0.00839\t0.00266\t0.00406\t0.01792\t0.00642\t0.00601\n+16\t0.01543\t0.01188\t0.01407\t0.01013\t0.01602\t0.00903\t0.00813\t0.01838\t0.01441\t0.08800\t0.01329\t0.01475\t0.01056\t0.00528\t0.00514\t0.00110\t0.00504\t0.00424\t0.00438\t0.73076\n+17\t0.01794\t0.76823\t0.03516\t0.01148\t0.01722\t0.02655\t0.01148\t0.02009\t0.01363\t0.01579\t0.00933\t0.01076\t0.00861\t0.00574\t0.00431\t0.00144\t0.00718\t0.00359\t0.00287\t0.00861\n+18\t0.00793\t0.00680\t0.00680\t0.00680\t0.00906\t0.00566\t0.00510\t0.00963\t0.01529\t0.01813\t0.06797\t0.06457\t0.71961\t0.01699\t0.00793\t0.00227\t0.00340\t0.01416\t0.00623\t0.00566\n+19\t0.01447\t0.01191\t0.01397\t0.01001\t0.01594\t0.00898\t0.00802\t0.01744\t0.01410\t0.04610\t0.01243\t0.01422\t0.01017\t0.00508\t0.00503\t0.00103\t0.00499\t0.00407\t0.00412\t0.77792\n+20\t0.01027\t0.00691\t0.00774\t0.00758\t0.00776\t0.00697\t0.00435\t0.03233\t0.01047\t0.01397\t0.02098\t0.04300\t0.02397\t0.73946\t0.03325\t0.00636\t0.00653\t0.00964\t0.00415\t0.00431\n+21\t0.01794\t0.76823\t0.03516\t0.01148\t0.01722\t0.02655\t0.01148\t0.02009\t0.01363\t0.01579\t0.00933\t0.01076\t0.00861\t0.00574\t0.00431\t0.00144\t0.00718\t0.00359\t0.00287\t0.00861\n+22\t0.01050\t0.00830\t0.01027\t0.00958\t0.01223\t0.00686\t0.00693\t0.01240\t0.01328\t0.01904\t0.02685\t0.'..b'\t0.00637\t0.00637\t0.00212\t0.00992\t0.00496\t0.00283\t0.00992\n+30\t0.01349\t0.01155\t0.01378\t0.01023\t0.01538\t0.00934\t0.00817\t0.01641\t0.01424\t0.02206\t0.08613\t0.01777\t0.01549\t0.00628\t0.00627\t0.00122\t0.04805\t0.00494\t0.00427\t0.67492\n+31\t0.01563\t0.01190\t0.01449\t0.01079\t0.01594\t0.00998\t0.00870\t0.01844\t0.01441\t0.10170\t0.04345\t0.01654\t0.01287\t0.00633\t0.00683\t0.00134\t0.07198\t0.00481\t0.00452\t0.60935\n+32\t0.57911\t0.01425\t0.01365\t0.01147\t0.01565\t0.06535\t0.08852\t0.01969\t0.01281\t0.02724\t0.01363\t0.01537\t0.04553\t0.00686\t0.00495\t0.00206\t0.00620\t0.00487\t0.04541\t0.00738\n+33\t0.01473\t0.24216\t0.53307\t0.01696\t0.02570\t0.01868\t0.02103\t0.02092\t0.01402\t0.01970\t0.01127\t0.01320\t0.00853\t0.00620\t0.00579\t0.00193\t0.00914\t0.00457\t0.00284\t0.00955\n+34\t0.01406\t0.13303\t0.63636\t0.01810\t0.02746\t0.01705\t0.02301\t0.02109\t0.01409\t0.02052\t0.01168\t0.01371\t0.00851\t0.00629\t0.00610\t0.00203\t0.00955\t0.00477\t0.00284\t0.00974\n+35\t0.01568\t0.39770\t0.38585\t0.01534\t0.02319\t0.02101\t0.01820\t0.02068\t0.01390\t0.01855\t0.01070\t0.01248\t0.00855\t0.00606\t0.00535\t0.00178\t0.00856\t0.00428\t0.00285\t0.00927\n+36\t0.01454\t0.21255\t0.56110\t0.01727\t0.02618\t0.01824\t0.02156\t0.02097\t0.01404\t0.01992\t0.01138\t0.01334\t0.00853\t0.00622\t0.00587\t0.00196\t0.00925\t0.00463\t0.00284\t0.00960\n+37\t0.01382\t0.13225\t0.60466\t0.01756\t0.02658\t0.01663\t0.02215\t0.02059\t0.01414\t0.02038\t0.01410\t0.01589\t0.03931\t0.00675\t0.00616\t0.00204\t0.00927\t0.00517\t0.00299\t0.00956\n+38\t0.01356\t0.12769\t0.49865\t0.01650\t0.02439\t0.01555\t0.01995\t0.01967\t0.01428\t0.02050\t0.04436\t0.02058\t0.01362\t0.00900\t0.03082\t0.00236\t0.00905\t0.05881\t0.00337\t0.03728\n+39\t0.01313\t0.08301\t0.58942\t0.01708\t0.02572\t0.01513\t0.02141\t0.01980\t0.01439\t0.02075\t0.03951\t0.01982\t0.07730\t0.00756\t0.00642\t0.00209\t0.00889\t0.00596\t0.00330\t0.00931\n+40\t0.01338\t0.10943\t0.42770\t0.01622\t0.02349\t0.01463\t0.04140\t0.01915\t0.01472\t0.02098\t0.07258\t0.02542\t0.01732\t0.00849\t0.00664\t0.00212\t0.00830\t0.09929\t0.00376\t0.05499\n+41\t0.01387\t0.14305\t0.56900\t0.01728\t0.02592\t0.01656\t0.02151\t0.02045\t0.01434\t0.02063\t0.04305\t0.01732\t0.01192\t0.00701\t0.00623\t0.00205\t0.00908\t0.02813\t0.00315\t0.00944\n+42\t0.01414\t0.07595\t0.51914\t0.04965\t0.02743\t0.01532\t0.06433\t0.02056\t0.01429\t0.04474\t0.01390\t0.05784\t0.01104\t0.00717\t0.00645\t0.00209\t0.00912\t0.00595\t0.00330\t0.03759\n+43\t0.01460\t0.14395\t0.47049\t0.01710\t0.02494\t0.05615\t0.04387\t0.02094\t0.03211\t0.02067\t0.06059\t0.01824\t0.01351\t0.00721\t0.00630\t0.00203\t0.00898\t0.02570\t0.00340\t0.00923\n+44\t0.01378\t0.10101\t0.49102\t0.01743\t0.02568\t0.01545\t0.07141\t0.02008\t0.01462\t0.02125\t0.07071\t0.01710\t0.01332\t0.00675\t0.00630\t0.00197\t0.00879\t0.00556\t0.00335\t0.07439\n+45\t0.04189\t0.09187\t0.53880\t0.01908\t0.05577\t0.01614\t0.05576\t0.02120\t0.01435\t0.04245\t0.01300\t0.01628\t0.00984\t0.00671\t0.00632\t0.00210\t0.00927\t0.02634\t0.00320\t0.00963\n+46\t0.04654\t0.07846\t0.41595\t0.01785\t0.02560\t0.01635\t0.09795\t0.05063\t0.09666\t0.02311\t0.03525\t0.01669\t0.01188\t0.00681\t0.00639\t0.00207\t0.00870\t0.00569\t0.00375\t0.03364\n+47\t0.10232\t0.05312\t0.26087\t0.01897\t0.10804\t0.03268\t0.07738\t0.03711\t0.05728\t0.04561\t0.07796\t0.02230\t0.03327\t0.00793\t0.00655\t0.00213\t0.00784\t0.03534\t0.00424\t0.00907\n+48\t0.07175\t0.09756\t0.23328\t0.04833\t0.05557\t0.01674\t0.17539\t0.02276\t0.10860\t0.04224\t0.03861\t0.01772\t0.01266\t0.00691\t0.00683\t0.00212\t0.02352\t0.00617\t0.00394\t0.00929\n+49\t0.03434\t0.04274\t0.26010\t0.01806\t0.02447\t0.12294\t0.16487\t0.02106\t0.01565\t0.06205\t0.01962\t0.02308\t0.08282\t0.00799\t0.00682\t0.00209\t0.00909\t0.03838\t0.00395\t0.03988\n+50\t0.11087\t0.05688\t0.26057\t0.06930\t0.02504\t0.01521\t0.11556\t0.02290\t0.09561\t0.08845\t0.01735\t0.01871\t0.04162\t0.00717\t0.00638\t0.00211\t0.00803\t0.00609\t0.00424\t0.02793\n+51\t0.08908\t0.06673\t0.25069\t0.06192\t0.07339\t0.01623\t0.15104\t0.06054\t0.06051\t0.04701\t0.03086\t0.01679\t0.01148\t0.00665\t0.00645\t0.00208\t0.00853\t0.00590\t0.00391\t0.03022\n+52\t0.08923\t0.06676\t0.20309\t0.01870\t0.06932\t0.05357\t0.13792\t0.02404\t0.12885\t0.06920\t0.03385\t0.01770\t0.01283\t0.00691\t0.00641\t0.00205\t0.00815\t0.00602\t0.00430\t0.04111\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+38\t328\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W06HU.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W06OE.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W06OE.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,477 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t31\n+\n+[block]\n+# block no. 0 follows, 38 sequences, length 63\n+# corresponding to MSA columns:\n+# 32-58,69-104\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.00969\t0.00692\t0.00969\t0.01108\t0.01246\t0.00692\t0.00969\t0.01246\t0.01385\t0.01800\t0.03185\t0.06786\t0.03462\t0.01662\t0.00831\t0.00277\t0.00554\t0.71057\t0.00554\t0.00554\n+1\t0.02610\t0.01167\t0.01485\t0.01138\t0.01607\t0.01097\t0.00940\t0.18161\t0.01962\t0.59953\t0.02172\t0.01917\t0.01388\t0.00740\t0.00604\t0.00185\t0.00544\t0.00591\t0.00714\t0.01024\n+2\t0.00738\t0.00548\t0.00689\t0.00786\t0.00863\t0.00499\t0.00539\t0.00867\t0.01240\t0.01625\t0.09662\t0.57966\t0.18264\t0.01760\t0.00752\t0.00232\t0.00335\t0.01572\t0.00567\t0.00499\n+3\t0.01240\t0.01220\t0.02203\t0.53063\t0.15033\t0.01383\t0.13934\t0.01652\t0.01266\t0.01671\t0.01104\t0.01589\t0.00844\t0.00575\t0.00619\t0.00197\t0.00825\t0.00565\t0.00278\t0.00737\n+4\t0.01496\t0.01292\t0.01360\t0.01224\t0.01564\t0.01496\t0.00952\t0.03197\t0.74019\t0.02516\t0.02448\t0.02244\t0.01836\t0.00816\t0.00612\t0.00204\t0.00476\t0.00680\t0.00612\t0.00952\n+5\t0.00860\t0.00641\t0.00947\t0.00947\t0.01047\t0.00741\t0.00727\t0.01061\t0.00961\t0.01382\t0.01630\t0.02464\t0.01548\t0.09277\t0.71769\t0.00942\t0.01545\t0.00659\t0.00325\t0.00526\n+6\t0.83108\t0.01163\t0.00884\t0.00791\t0.01163\t0.01350\t0.00651\t0.01768\t0.01024\t0.02699\t0.00838\t0.00977\t0.00651\t0.00558\t0.00372\t0.00186\t0.00465\t0.00326\t0.00372\t0.00651\n+7\t0.01594\t0.76439\t0.05805\t0.01054\t0.01583\t0.02344\t0.01073\t0.01805\t0.01224\t0.01433\t0.00845\t0.00976\t0.00772\t0.00517\t0.00393\t0.00131\t0.00652\t0.00326\t0.00257\t0.00776\n+8\t0.01471\t0.01412\t0.02410\t0.07340\t0.71594\t0.01425\t0.01838\t0.01831\t0.01362\t0.01944\t0.01128\t0.01495\t0.00945\t0.00539\t0.00596\t0.00180\t0.00719\t0.00536\t0.00296\t0.00939\n+9\t0.01247\t0.01069\t0.01247\t0.00891\t0.01426\t0.00802\t0.00713\t0.01515\t0.01247\t0.01960\t0.01069\t0.01247\t0.00891\t0.00446\t0.00446\t0.00089\t0.00446\t0.00356\t0.00356\t0.82536\n+10\t0.00750\t0.00608\t0.00665\t0.00656\t0.00838\t0.00524\t0.00490\t0.00937\t0.01455\t0.01838\t0.24778\t0.07517\t0.53934\t0.01454\t0.00712\t0.00201\t0.00300\t0.01233\t0.00587\t0.00524\n+11\t0.02329\t0.01557\t0.01719\t0.01324\t0.01798\t0.01684\t0.01092\t0.58495\t0.05240\t0.16064\t0.01641\t0.01577\t0.01133\t0.00729\t0.00603\t0.00182\t0.00629\t0.00558\t0.00627\t0.01021\n+12\t0.00875\t0.00583\t0.00656\t0.00656\t0.00656\t0.00583\t0.00365\t0.00875\t0.00875\t0.01166\t0.01895\t0.03937\t0.02187\t0.78858\t0.03062\t0.00583\t0.00583\t0.00875\t0.00365\t0.00365\n+13\t0.01420\t0.01623\t0.03550\t0.02535\t0.03144\t0.01521\t0.72921\t0.01927\t0.01420\t0.01927\t0.01217\t0.01623\t0.00913\t0.00507\t0.00710\t0.00203\t0.01014\t0.00710\t0.00304\t0.00811\n+14\t0.00774\t0.00583\t0.00717\t0.00745\t0.00867\t0.00525\t0.00535\t0.00963\t0.01430\t0.01909\t0.32595\t0.29774\t0.23331\t0.01528\t0.00730\t0.00211\t0.00311\t0.01346\t0.00600\t0.00525\n+15\t0.03469\t0.03058\t0.73673\t0.01689\t0.02564\t0.01396\t0.02179\t0.01901\t0.01263\t0.01927\t0.01073\t0.01262\t0.00759\t0.00571\t0.00566\t0.00190\t0.00877\t0.00441\t0.00257\t0.00882\n+16\t0.01231\t0.07764\t0.71305\t0.01673\t0.02539\t0.01457\t0.02150\t0.01899\t0.01267\t0.01875\t0.01065\t0.01251\t0.00763\t0.00568\t0.00560\t0.00187\t0.00874\t0.00437\t0.00254\t0.00882\n+17\t0.35601\t0.02164\t0.01366\t0.01237\t0.01573\t0.45468\t0.00952\t0.02141\t0.01424\t0.01978\t0.00892\t0.01040\t0.00724\t0.00595\t0.00472\t0.00168\t0.00829\t0.00362\t0.00336\t0.00678\n+18\t0.83108\t0.01163\t0.00884\t0.00791\t0.01163\t0.01350\t0.00651\t0.01768\t0.01024\t0.02699\t0.00838\t0.00977\t0.00651\t0.00558\t0.00372\t0.00186\t0.00465\t0.00326\t0.00372\t0.00651\n+19\t0.01219\t0.05545\t0.73421\t0.01693\t0.02570\t0.01429\t0.02184\t0.01902\t0.01269\t0.01889\t0.01072\t0.01260\t0.00762\t0.00570\t0.00566\t0.00189\t0.00881\t0.00441\t0.00254\t0.00885\n+20\t0.00861\t0.00637\t0.00929\t0.00929\t0.01023\t0.00731\t0.00704\t0.01050\t0.00955\t0.01368\t0.01646\t0.02557\t0.01588\t0.13669\t0.67432\t0.00920\t0.01485\t0.00673\t0.00327\t0.00516\n+21\t0.00861\t0.00638\t0.00933\t0.00933\t0.01029\t0.00734\t0.00710\t0.01053\t0.00957\t0.01372\t0.01642\t0.02534\t0.01578\t0.12561\t0.68526\t0.00925\t0.01500\t0.00669\t0.00327\t0.00518\n+22\t0.01076\t0.00575\t0.00630\t0.00630\t0.00765\t0.00594\t0.00477\t0.01345\t0.01211\t0.02097\t0.019'..b'89\t0.00745\t0.00605\t0.00186\t0.00512\t0.00605\t0.00745\t0.01024\n+16\t0.01207\t0.03112\t0.75741\t0.01715\t0.02604\t0.01397\t0.02223\t0.01905\t0.01270\t0.01905\t0.01080\t0.01270\t0.00762\t0.00572\t0.00572\t0.00191\t0.00889\t0.00445\t0.00254\t0.00889\n+17\t0.00969\t0.00692\t0.00969\t0.01108\t0.01246\t0.00692\t0.00969\t0.01246\t0.01385\t0.01800\t0.03185\t0.06786\t0.03462\t0.01662\t0.00831\t0.00277\t0.00554\t0.71057\t0.00554\t0.00554\n+18\t0.01207\t0.03112\t0.75741\t0.01715\t0.02604\t0.01397\t0.02223\t0.01905\t0.01270\t0.01905\t0.01080\t0.01270\t0.00762\t0.00572\t0.00572\t0.00191\t0.00889\t0.00445\t0.00254\t0.00889\n+19\t0.01489\t0.01429\t0.02442\t0.03692\t0.75106\t0.01429\t0.01846\t0.01846\t0.01370\t0.01965\t0.01132\t0.01489\t0.00953\t0.00536\t0.00596\t0.00179\t0.00715\t0.00536\t0.00298\t0.00953\n+20\t0.01489\t0.01429\t0.02442\t0.03692\t0.75106\t0.01429\t0.01846\t0.01846\t0.01370\t0.01965\t0.01132\t0.01489\t0.00953\t0.00536\t0.00596\t0.00179\t0.00715\t0.00536\t0.00298\t0.00953\n+21\t0.00711\t0.00609\t0.00609\t0.00609\t0.00813\t0.00508\t0.00457\t0.00863\t0.01371\t0.01625\t0.06094\t0.05789\t0.74862\t0.01524\t0.00711\t0.00203\t0.00305\t0.01270\t0.00559\t0.00508\n+22\t0.01136\t0.01069\t0.01804\t0.77412\t0.04143\t0.01337\t0.01671\t0.01537\t0.01203\t0.01537\t0.01069\t0.01604\t0.00802\t0.00601\t0.00601\t0.00200\t0.00802\t0.00535\t0.00267\t0.00668\n+23\t0.01608\t0.79220\t0.03152\t0.01029\t0.01544\t0.02380\t0.01029\t0.01801\t0.01222\t0.01415\t0.00836\t0.00965\t0.00772\t0.00515\t0.00386\t0.00129\t0.00643\t0.00322\t0.00257\t0.00772\n+24\t0.01420\t0.01623\t0.03550\t0.02535\t0.03144\t0.01521\t0.72921\t0.01927\t0.01420\t0.01927\t0.01217\t0.01623\t0.00913\t0.00507\t0.00710\t0.00203\t0.01014\t0.00710\t0.00304\t0.00811\n+25\t0.01608\t0.79220\t0.03152\t0.01029\t0.01544\t0.02380\t0.01029\t0.01801\t0.01222\t0.01415\t0.00836\t0.00965\t0.00772\t0.00515\t0.00386\t0.00129\t0.00643\t0.00322\t0.00257\t0.00772\n+26\t0.01136\t0.01069\t0.01804\t0.77412\t0.04143\t0.01337\t0.01671\t0.01537\t0.01203\t0.01537\t0.01069\t0.01604\t0.00802\t0.00601\t0.00601\t0.00200\t0.00802\t0.00535\t0.00267\t0.00668\n+27\t0.02247\t0.02867\t0.01705\t0.01550\t0.01860\t0.76443\t0.01162\t0.02402\t0.01705\t0.01472\t0.00930\t0.01085\t0.00775\t0.00620\t0.00542\t0.00155\t0.01085\t0.00387\t0.00310\t0.00697\n+28\t0.01496\t0.01292\t0.01360\t0.01224\t0.01564\t0.01496\t0.00952\t0.03197\t0.74019\t0.02516\t0.02448\t0.02244\t0.01836\t0.00816\t0.00612\t0.00204\t0.00476\t0.00680\t0.00612\t0.00952\n+29\t0.01136\t0.01069\t0.01804\t0.77412\t0.04143\t0.01337\t0.01671\t0.01537\t0.01203\t0.01537\t0.01069\t0.01604\t0.00802\t0.00601\t0.00601\t0.00200\t0.00802\t0.00535\t0.00267\t0.00668\n+30\t0.01136\t0.01069\t0.01804\t0.77412\t0.04143\t0.01337\t0.01671\t0.01537\t0.01203\t0.01537\t0.01069\t0.01604\t0.00802\t0.00601\t0.00601\t0.00200\t0.00802\t0.00535\t0.00267\t0.00668\n+31\t0.00970\t0.00951\t0.09182\t0.01126\t0.01354\t0.00752\t0.01058\t0.01282\t0.01371\t0.01795\t0.03236\t0.06081\t0.10106\t0.01528\t0.00791\t0.00260\t0.00567\t0.56483\t0.00521\t0.00586\n+32\t0.01156\t0.01096\t0.01809\t0.69048\t0.03860\t0.01392\t0.01632\t0.01527\t0.01172\t0.01527\t0.01038\t0.01572\t0.00801\t0.00651\t0.00753\t0.00207\t0.09290\t0.00534\t0.00267\t0.00667\n+33\t0.01144\t0.01295\t0.09960\t0.69063\t0.03973\t0.01343\t0.01732\t0.01578\t0.01210\t0.01578\t0.01070\t0.01567\t0.00798\t0.00598\t0.00598\t0.00199\t0.00812\t0.00525\t0.00266\t0.00693\n+34\t0.00731\t0.00533\t0.00688\t0.00812\t0.00866\t0.00491\t0.00547\t0.00840\t0.01176\t0.01546\t0.03622\t0.70449\t0.11797\t0.01845\t0.00762\t0.00240\t0.00344\t0.01662\t0.00558\t0.00491\n+35\t0.02498\t0.00975\t0.01314\t0.01025\t0.01439\t0.00851\t0.00827\t0.02705\t0.01628\t0.67321\t0.02321\t0.02256\t0.01566\t0.09361\t0.00876\t0.00230\t0.00520\t0.00635\t0.00703\t0.00951\n+36\t0.02252\t0.02737\t0.01716\t0.01532\t0.01860\t0.68217\t0.01160\t0.10200\t0.01829\t0.01728\t0.00987\t0.01124\t0.00802\t0.00631\t0.00549\t0.00158\t0.01038\t0.00404\t0.00342\t0.00733\n+37\t0.01457\t0.01268\t0.01409\t0.09628\t0.01849\t0.01479\t0.01031\t0.03014\t0.65987\t0.02408\t0.02296\t0.02174\t0.01722\t0.00792\t0.00611\t0.00204\t0.00512\t0.00664\t0.00574\t0.00921\n+38\t0.01421\t0.01159\t0.01263\t0.01140\t0.01443\t0.01313\t0.00883\t0.02799\t0.58108\t0.05003\t0.10371\t0.02535\t0.02241\t0.03046\t0.04309\t0.00248\t0.00513\t0.00726\t0.00602\t0.00877\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t31\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W06OE.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W07NX.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W07NX.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,407 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t69\n+\n+[block]\n+# block no. 0 follows, 33 sequences, length 11\n+# corresponding to MSA columns:\n+# 88-98\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.00800\t0.00580\t0.00757\t0.00899\t0.00950\t0.00536\t0.00603\t0.00919\t0.01278\t0.01688\t0.03846\t0.71417\t0.09230\t0.02034\t0.00836\t0.00264\t0.00378\t0.01837\t0.00611\t0.00536\n+1\t0.02807\t0.01088\t0.01481\t0.01146\t0.01630\t0.00942\t0.00942\t0.03066\t0.01883\t0.68089\t0.07666\t0.02435\t0.01962\t0.00853\t0.00670\t0.00204\t0.00542\t0.00700\t0.00808\t0.01084\n+2\t0.01320\t0.03405\t0.73453\t0.01876\t0.02849\t0.01529\t0.02432\t0.02085\t0.01390\t0.02085\t0.01181\t0.01390\t0.00834\t0.00625\t0.00625\t0.00208\t0.00973\t0.00486\t0.00278\t0.00973\n+3\t0.00932\t0.00673\t0.00880\t0.00828\t0.00984\t0.00621\t0.00621\t0.01242\t0.01863\t0.02640\t0.72410\t0.04918\t0.06212\t0.01346\t0.00776\t0.00207\t0.00311\t0.01191\t0.00725\t0.00621\n+4\t0.81514\t0.01273\t0.00968\t0.00866\t0.01273\t0.01477\t0.00713\t0.01935\t0.01120\t0.02954\t0.00917\t0.01069\t0.00713\t0.00611\t0.00407\t0.00204\t0.00509\t0.00356\t0.00407\t0.00713\n+5\t0.01431\t0.01362\t0.02314\t0.40568\t0.37777\t0.01512\t0.01922\t0.01847\t0.01405\t0.01910\t0.01203\t0.01694\t0.00958\t0.00623\t0.00655\t0.00208\t0.00831\t0.00586\t0.00309\t0.00883\n+6\t0.00802\t0.00573\t0.00764\t0.00917\t0.00955\t0.00535\t0.00611\t0.00917\t0.01260\t0.01681\t0.03628\t0.76434\t0.04354\t0.02062\t0.00840\t0.00267\t0.00382\t0.01872\t0.00611\t0.00535\n+7\t0.01256\t0.09012\t0.49756\t0.01561\t0.02293\t0.01394\t0.01878\t0.01851\t0.01468\t0.02122\t0.14755\t0.06189\t0.02046\t0.00836\t0.00649\t0.00206\t0.00792\t0.00685\t0.00381\t0.00871\n+8\t0.01893\t0.10311\t0.05847\t0.01509\t0.06858\t0.03503\t0.03064\t0.08666\t0.20816\t0.16007\t0.03995\t0.06990\t0.01746\t0.00848\t0.00640\t0.00199\t0.00629\t0.00705\t0.00569\t0.05201\n+9\t0.01640\t0.01116\t0.01346\t0.00995\t0.01529\t0.00870\t0.00799\t0.01920\t0.01498\t0.16457\t0.04909\t0.01916\t0.04423\t0.00643\t0.00548\t0.00129\t0.00488\t0.00524\t0.00500\t0.57750\n+10\t0.01598\t0.01533\t0.02616\t0.09754\t0.67286\t0.01556\t0.02005\t0.01993\t0.01484\t0.02113\t0.01233\t0.01639\t0.01030\t0.00592\t0.00652\t0.00197\t0.00790\t0.00586\t0.00323\t0.01018\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t1\n+\n+[block]\n+# block no. 1 follows, 33 sequences, length 41\n+# corresponding to MSA columns:\n+# 100-140\n+name=unknown_B\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.08639\t0.10657\t0.06567\t0.01864\t0.04246\t0.01708\t0.24850\t0.07235\t0.16441\t0.08759\t0.01652\t0.01776\t0.01227\t0.00677\t0.00650\t0.00206\t0.00793\t0.00639\t0.00467\t0.00946\n+1\t0.57803\t0.07938\t0.11796\t0.01055\t0.01553\t0.01567\t0.01013\t0.04144\t0.01267\t0.02737\t0.03443\t0.01264\t0.00944\t0.00640\t0.00461\t0.00199\t0.00593\t0.00411\t0.00397\t0.00772\n+2\t0.01717\t0.05763\t0.10713\t0.05499\t0.46228\t0.05908\t0.01874\t0.08395\t0.03582\t0.02266\t0.01271\t0.01569\t0.01026\t0.00625\t0.00635\t0.00194\t0.00814\t0.00558\t0.00358\t0.01005\n+3\t0.00940\t0.00705\t0.01058\t0.01058\t0.01176\t0.00823\t0.00823\t0.01176\t0.01058\t0.01528\t0.01763\t0.02586\t0.01646\t0.04937\t0.74255\t0.01058\t0.01763\t0.00705\t0.00353\t0.00588\n+4\t0.01412\t0.20897\t0.42268\t0.01797\t0.08580\t0.01697\t0.01903\t0.01947\t0.01386\t0.01931\t0.01381\t0.05953\t0.01209\t0.00751\t0.00605\t0.00199\t0.00838\t0.04024\t0.00319\t0.00904\n+5\t0.01714\t0.01397\t0.01491\t0.01330\t0.01710\t0.01598\t0.01038\t0.03481\t0.67490\t0.06877\t0.02675\t0.02444\t0.01987\t0.00889\t0.00669\t0.00222\t0.00523\t0.00739\t0.00678\t0.01047\n+6\t0.81514\t0.01273\t0.00968\t0.00866\t0.01273\t0.01477\t0.00713\t0.01935\t0.01120\t0.02954\t0.00917\t0.01069\t0.00713\t0.00611\t0.00407\t0.00204\t0.00509\t0.00356\t0.00407\t0.00713\n+7\t0.01554\t0.01776\t0.03885\t0.02775\t0.03441\t0.01665\t0.70366\t0.02109\t0.01554\t0.02109\t0.01332\t0.01776\t0.00999\t0.00555\t0.00777\t0.00222\t0.01110\t0.00777\t0.00333\t0.00888\n+8\t0.00832\t0.00594\t0.00796\t0.00938\t0.00993\t0.00559\t0.00651\t0.00973\t0.01314\t0.01755\t0.07146\t0.66646\t0.04399\t0.02004\t0.00843\t0.00267\t0.00398\t0.07728\t0.00617\t0.00545\n+9\t0.00879\t0.00651\t0.00696\t0.00696\t0.00793\t0.00602\t0.00443\t0.00952\t0.01195\t0.01496\t0.04084\t0.05195\t0.33059\t0.43967\t0.02225\t0.00456\t0.00505\t0.01146\t0.00492\t0.00468'..b'845\t0.00579\t0.00446\t0.00145\t0.00771\t0.00362\t0.00290\t0.00834\n+9\t0.81514\t0.01273\t0.00968\t0.00866\t0.01273\t0.01477\t0.00713\t0.01935\t0.01120\t0.02954\t0.00917\t0.01069\t0.00713\t0.00611\t0.00407\t0.00204\t0.00509\t0.00356\t0.00407\t0.00713\n+10\t0.01004\t0.00808\t0.01176\t0.01149\t0.01236\t0.00980\t0.00896\t0.01207\t0.01078\t0.01559\t0.01872\t0.12593\t0.01891\t0.03915\t0.52207\t0.00822\t0.13782\t0.00845\t0.00378\t0.00602\n+11\t0.01926\t0.01249\t0.01453\t0.01285\t0.01663\t0.01335\t0.01039\t0.07215\t0.37041\t0.20734\t0.02733\t0.03229\t0.02173\t0.01031\t0.00710\t0.00231\t0.00559\t0.12711\t0.00695\t0.00990\n+12\t0.00957\t0.00638\t0.00718\t0.00718\t0.00718\t0.00638\t0.00399\t0.00957\t0.00957\t0.01276\t0.02074\t0.04308\t0.02393\t0.76864\t0.03351\t0.00638\t0.00638\t0.00957\t0.00399\t0.00399\n+13\t0.01760\t0.77260\t0.03450\t0.01126\t0.01690\t0.02605\t0.01126\t0.01971\t0.01338\t0.01549\t0.00915\t0.01056\t0.00845\t0.00563\t0.00422\t0.00141\t0.00704\t0.00352\t0.00282\t0.00845\n+14\t0.01227\t0.00614\t0.00614\t0.00614\t0.00767\t0.00614\t0.00460\t0.01534\t0.01381\t0.02454\t0.02148\t0.02454\t0.01687\t0.00767\t0.00460\t0.00153\t0.00307\t0.00614\t0.80518\t0.00614\n+15\t0.01311\t0.01239\t0.02097\t0.62759\t0.16526\t0.01480\t0.01862\t0.01742\t0.01348\t0.01764\t0.01182\t0.01733\t0.00907\t0.00646\t0.00657\t0.00215\t0.00861\t0.00585\t0.00298\t0.00786\n+16\t0.00799\t0.00668\t0.00696\t0.00689\t0.00902\t0.00565\t0.00517\t0.00986\t0.01551\t0.01897\t0.15746\t0.06140\t0.63339\t0.01623\t0.00778\t0.00220\t0.00330\t0.01362\t0.00627\t0.00565\n+17\t0.01365\t0.01170\t0.01365\t0.00975\t0.01560\t0.00878\t0.00780\t0.01658\t0.01365\t0.02145\t0.01170\t0.01365\t0.00975\t0.00488\t0.00488\t0.00098\t0.00488\t0.00390\t0.00390\t0.80888\n+18\t0.01365\t0.01170\t0.01365\t0.00975\t0.01560\t0.00878\t0.00780\t0.01658\t0.01365\t0.02145\t0.01170\t0.01365\t0.00975\t0.00488\t0.00488\t0.00098\t0.00488\t0.00390\t0.00390\t0.80888\n+19\t0.00957\t0.00638\t0.00718\t0.00718\t0.00718\t0.00638\t0.00399\t0.00957\t0.00957\t0.01276\t0.02074\t0.04308\t0.02393\t0.76864\t0.03351\t0.00638\t0.00638\t0.00957\t0.00399\t0.00399\n+20\t0.02565\t0.01744\t0.01914\t0.01467\t0.01992\t0.01893\t0.01212\t0.61263\t0.02928\t0.13684\t0.01721\t0.01672\t0.01190\t0.00794\t0.00659\t0.00198\t0.00702\t0.00602\t0.00680\t0.01120\n+21\t0.00802\t0.00573\t0.00764\t0.00917\t0.00955\t0.00535\t0.00611\t0.00917\t0.01260\t0.01681\t0.03628\t0.76434\t0.04354\t0.02062\t0.00840\t0.00267\t0.00382\t0.01872\t0.00611\t0.00535\n+22\t0.01320\t0.03405\t0.73453\t0.01876\t0.02849\t0.01529\t0.02432\t0.02085\t0.01390\t0.02085\t0.01181\t0.01390\t0.00834\t0.00625\t0.00625\t0.00208\t0.00973\t0.00486\t0.00278\t0.00973\n+23\t0.02503\t0.01844\t0.01976\t0.01515\t0.02042\t0.02042\t0.01251\t0.70562\t0.03095\t0.04149\t0.01581\t0.01581\t0.01120\t0.00790\t0.00659\t0.00198\t0.00724\t0.00593\t0.00659\t0.01120\n+24\t0.01812\t0.01503\t0.02514\t0.03645\t0.62944\t0.01482\t0.01875\t0.02184\t0.01552\t0.11962\t0.01426\t0.01714\t0.01124\t0.00618\t0.00653\t0.00197\t0.00751\t0.00597\t0.00393\t0.01053\n+25\t0.01658\t0.01323\t0.01511\t0.01164\t0.01674\t0.05157\t0.03606\t0.03899\t0.11991\t0.10520\t0.03509\t0.01890\t0.03647\t0.00667\t0.00573\t0.00147\t0.00561\t0.00549\t0.00498\t0.45457\n+26\t0.01496\t0.38596\t0.29756\t0.01424\t0.02086\t0.01940\t0.01614\t0.01931\t0.01382\t0.01811\t0.01371\t0.02063\t0.01247\t0.00760\t0.00567\t0.00189\t0.00793\t0.09788\t0.00325\t0.00861\n+27\t0.10060\t0.22628\t0.30685\t0.01455\t0.04365\t0.01682\t0.01558\t0.01935\t0.01349\t0.02037\t0.01233\t0.01406\t0.02841\t0.00612\t0.00530\t0.00172\t0.00747\t0.00449\t0.00322\t0.13935\n+28\t0.14568\t0.12128\t0.10204\t0.01270\t0.01804\t0.05265\t0.03299\t0.08866\t0.06852\t0.04368\t0.01436\t0.03938\t0.01196\t0.00706\t0.00556\t0.00175\t0.00662\t0.02611\t0.00434\t0.19660\n+29\t0.13785\t0.01382\t0.01374\t0.01197\t0.03766\t0.06930\t0.00914\t0.12212\t0.10513\t0.09091\t0.02545\t0.02506\t0.14684\t0.00874\t0.00608\t0.00186\t0.00571\t0.00683\t0.00543\t0.15638\n+30\t0.07072\t0.01424\t0.01617\t0.01579\t0.11463\t0.05532\t0.01089\t0.05826\t0.20681\t0.12656\t0.01933\t0.01935\t0.03198\t0.00723\t0.00602\t0.00180\t0.00597\t0.00588\t0.00536\t0.20768\n+31\t0.11235\t0.03854\t0.01450\t0.01148\t0.01541\t0.10438\t0.03035\t0.03945\t0.09773\t0.06291\t0.04780\t0.02205\t0.01587\t0.11222\t0.00953\t0.00233\t0.00636\t0.02184\t0.00467\t0.23023\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t52\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W07NX.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W08R7.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W08R7.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,503 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+4\t78\n+\n+[block]\n+# block no. 0 follows, 28 sequences, length 7\n+# corresponding to MSA columns:\n+# 108-114\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01782\t0.00959\t0.01067\t0.00908\t0.01234\t0.00910\t0.00713\t0.07647\t0.01768\t0.12970\t0.02250\t0.02434\t0.01697\t0.00817\t0.00564\t0.00174\t0.00446\t0.00651\t0.49950\t0.11060\n+1\t0.01911\t0.02194\t0.19850\t0.02212\t0.08531\t0.01691\t0.15576\t0.12299\t0.10621\t0.08825\t0.01974\t0.04869\t0.01557\t0.00870\t0.00766\t0.00239\t0.00900\t0.03515\t0.00526\t0.01075\n+2\t0.12135\t0.12449\t0.24483\t0.01899\t0.07759\t0.12287\t0.03452\t0.06015\t0.03417\t0.05585\t0.01421\t0.03469\t0.01126\t0.00753\t0.00642\t0.00213\t0.00923\t0.00569\t0.00414\t0.00992\n+3\t0.02257\t0.01059\t0.01324\t0.01101\t0.01504\t0.00970\t0.00880\t0.02697\t0.07894\t0.37264\t0.11385\t0.03554\t0.12605\t0.01111\t0.00737\t0.00223\t0.00508\t0.00922\t0.11008\t0.00997\n+4\t0.01986\t0.01675\t0.11072\t0.03720\t0.06496\t0.01365\t0.11232\t0.10744\t0.02022\t0.18867\t0.13480\t0.07406\t0.04591\t0.01022\t0.00781\t0.00233\t0.00751\t0.00916\t0.00633\t0.01007\n+5\t0.01953\t0.01680\t0.10746\t0.11825\t0.17329\t0.01442\t0.03820\t0.02612\t0.10525\t0.18698\t0.07957\t0.02535\t0.03877\t0.00874\t0.00743\t0.00230\t0.00761\t0.00766\t0.00574\t0.01054\n+6\t0.01247\t0.01149\t0.01140\t0.01127\t0.01287\t0.11377\t0.00829\t0.01432\t0.01392\t0.01724\t0.03022\t0.10008\t0.14123\t0.14123\t0.31932\t0.00710\t0.01249\t0.01023\t0.00471\t0.00635\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+3\t10\n+\n+[block]\n+# block no. 1 follows, 28 sequences, length 7\n+# corresponding to MSA columns:\n+# 125-131\n+name=unknown_B\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01394\t0.08127\t0.01520\t0.01079\t0.01510\t0.03609\t0.00842\t0.01649\t0.01535\t0.02187\t0.08610\t0.17401\t0.02490\t0.04263\t0.00789\t0.00193\t0.00552\t0.00890\t0.00506\t0.40852\n+1\t0.01607\t0.08459\t0.02626\t0.31839\t0.17793\t0.01756\t0.08906\t0.02214\t0.08164\t0.02157\t0.01465\t0.01884\t0.01150\t0.00700\t0.00703\t0.00220\t0.00887\t0.00647\t0.00383\t0.06439\n+2\t0.01671\t0.01846\t0.08813\t0.09657\t0.25079\t0.05706\t0.01843\t0.04373\t0.01570\t0.02196\t0.05177\t0.04983\t0.01524\t0.00965\t0.01197\t0.00251\t0.21089\t0.00722\t0.00392\t0.00946\n+3\t0.01363\t0.00815\t0.00967\t0.00883\t0.01148\t0.00720\t0.00678\t0.01633\t0.01849\t0.13666\t0.27141\t0.05286\t0.30338\t0.01465\t0.00802\t0.00229\t0.00398\t0.01241\t0.08633\t0.00747\n+4\t0.01415\t0.01162\t0.01303\t0.01263\t0.01524\t0.01279\t0.00941\t0.02638\t0.38949\t0.02624\t0.10057\t0.27289\t0.03571\t0.01477\t0.00816\t0.00261\t0.00499\t0.01296\t0.00724\t0.00913\n+5\t0.00987\t0.00731\t0.00920\t0.00895\t0.01066\t0.00664\t0.00663\t0.01282\t0.01926\t0.02653\t0.52778\t0.12449\t0.17050\t0.01623\t0.00865\t0.00238\t0.00355\t0.01425\t0.00767\t0.00664\n+6\t0.00888\t0.00721\t0.00788\t0.00806\t0.01009\t0.00621\t0.00591\t0.01086\t0.01673\t0.02085\t0.15907\t0.17391\t0.50181\t0.01858\t0.00870\t0.00251\t0.00373\t0.01587\t0.00693\t0.00621\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t14\n+\n+[block]\n+# block no. 2 follows, 28 sequences, length 38\n+# corresponding to MSA columns:\n+# 146-183\n+name=unknown_C\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.07024\t0.01341\t0.02160\t0.52801\t0.14958\t0.01585\t0.01894\t0.01911\t0.01502\t0.02097\t0.04911\t0.02047\t0.01298\t0.00751\t0.00713\t0.00236\t0.00890\t0.00664\t0.00363\t0.00855\n+1\t0.02038\t0.01916\t0.02559\t0.11570\t0.41160\t0.11583\t0.01920\t0.07938\t0.04088\t0.06056\t0.01489\t0.01808\t0.01177\t0.00715\t0.00713\t0.00217\t0.00911\t0.00633\t0.00430\t0.01079\n+2\t0.03042\t0.01477\t0.01753\t0.01372\t0.01910\t0.05017\t0.01122\t0.13645\t0.04651\t0.51788\t0.02584\t0.02312\t0.01681\t0.00889\t0.00720\t0.00221\t0.00674\t0.00706\t0.03241\t0.01196\n+3\t0.01650\t0.06161\t0.23715\t0.03047\t0.34473\t0.01728\t0.02133\t0.04008\t0.01648\t0.02367\t0.05425\t0.03627\t0.01487\t0.00787\t0.00796\t0.00225\t0.04607\t0.00673\t0.00383\t0.01059\n+4\t0.01728\t0.17465\t0.10616\t0.05256\t0.34147\t0.01884\t0.04494\t0.04450\t0.01665\t0.02280\t0.04255\t0.05630\t0.01504\t0.00778\t0.00685\t0.00211\t0.00840\t0.00691\t0.00391\t0.01032\n+5\t0.01329\t0.18912\t0.15799\t0.05065\t0.01990\t0.01470\t0.'..b'9624\t0.01841\t0.00859\t0.00245\t0.00368\t0.01534\t0.00675\t0.00614\n+8\t0.01943\t0.74891\t0.03809\t0.01244\t0.01866\t0.02876\t0.01244\t0.02177\t0.01477\t0.01710\t0.01011\t0.01166\t0.00933\t0.00622\t0.00466\t0.00155\t0.00777\t0.00389\t0.00311\t0.00933\n+9\t0.14244\t0.05974\t0.02208\t0.02123\t0.11926\t0.39823\t0.03776\t0.02547\t0.01764\t0.02107\t0.01136\t0.01399\t0.00952\t0.00752\t0.00762\t0.00208\t0.06534\t0.00506\t0.00377\t0.00884\n+10\t0.01561\t0.03736\t0.65087\t0.02056\t0.03073\t0.07388\t0.02581\t0.02351\t0.01578\t0.02259\t0.01290\t0.01516\t0.00922\t0.00695\t0.00688\t0.00227\t0.01094\t0.00532\t0.00312\t0.01055\n+11\t0.01905\t0.18317\t0.37558\t0.01753\t0.02564\t0.07263\t0.01981\t0.07717\t0.01752\t0.08153\t0.01419\t0.01580\t0.01054\t0.00865\t0.02908\t0.00240\t0.00996\t0.00534\t0.00401\t0.01040\n+12\t0.01046\t0.00749\t0.01018\t0.01018\t0.01096\t0.00827\t0.00722\t0.01202\t0.01124\t0.01576\t0.02084\t0.03615\t0.02147\t0.33011\t0.44465\t0.00983\t0.01451\t0.00890\t0.00410\t0.00566\n+13\t0.01607\t0.25661\t0.50096\t0.01817\t0.02752\t0.02054\t0.02242\t0.02263\t0.01517\t0.02120\t0.01214\t0.01421\t0.00925\t0.00669\t0.00622\t0.00207\t0.00983\t0.00491\t0.00308\t0.01031\n+14\t0.01264\t0.00806\t0.01069\t0.01040\t0.01244\t0.00739\t0.00801\t0.01557\t0.01853\t0.09307\t0.37883\t0.18588\t0.05337\t0.01620\t0.00868\t0.00252\t0.00442\t0.10792\t0.00752\t0.03788\n+15\t0.01646\t0.01571\t0.02674\t0.28969\t0.46609\t0.01687\t0.02155\t0.02097\t0.01583\t0.02189\t0.01340\t0.01849\t0.01086\t0.00676\t0.00722\t0.00225\t0.00901\t0.00647\t0.00347\t0.01028\n+16\t0.01777\t0.01348\t0.01580\t0.01146\t0.01779\t0.01084\t0.00924\t0.07374\t0.01718\t0.09029\t0.01479\t0.01619\t0.01159\t0.00600\t0.00572\t0.00128\t0.00567\t0.00478\t0.00500\t0.65140\n+17\t0.01027\t0.00758\t0.00879\t0.00858\t0.01078\t0.00665\t0.00651\t0.01274\t0.01801\t0.05007\t0.28483\t0.09455\t0.39358\t0.01708\t0.00863\t0.00245\t0.00384\t0.04113\t0.00727\t0.00665\n+18\t0.01690\t0.01787\t0.06368\t0.15547\t0.42681\t0.01741\t0.12634\t0.02170\t0.01606\t0.02255\t0.01354\t0.01828\t0.01095\t0.00679\t0.00799\t0.00229\t0.03461\t0.00675\t0.00351\t0.01050\n+19\t0.01042\t0.00765\t0.00873\t0.00847\t0.01071\t0.00670\t0.00642\t0.01278\t0.01772\t0.05358\t0.25221\t0.06296\t0.42021\t0.04574\t0.00972\t0.00262\t0.00400\t0.04561\t0.00713\t0.00659\n+20\t0.01843\t0.01696\t0.05235\t0.09843\t0.15892\t0.01776\t0.01545\t0.12591\t0.32033\t0.02920\t0.02250\t0.05499\t0.01781\t0.00919\t0.00739\t0.00237\t0.00725\t0.00787\t0.00593\t0.01097\n+21\t0.00921\t0.00672\t0.00866\t0.00958\t0.01055\t0.00618\t0.00665\t0.01110\t0.01594\t0.02146\t0.21615\t0.49038\t0.12008\t0.02024\t0.00902\t0.00273\t0.00395\t0.01814\t0.00708\t0.00618\n+22\t0.00942\t0.00687\t0.00880\t0.00974\t0.01075\t0.00638\t0.00690\t0.01130\t0.01563\t0.02085\t0.17467\t0.43439\t0.12910\t0.05622\t0.01049\t0.00299\t0.00433\t0.06816\t0.00688\t0.00611\n+23\t0.01607\t0.01351\t0.01561\t0.01124\t0.01765\t0.01071\t0.00903\t0.07062\t0.01660\t0.02545\t0.01328\t0.01526\t0.01089\t0.00565\t0.00553\t0.00116\t0.00559\t0.00448\t0.00454\t0.72710\n+24\t0.02012\t0.02303\t0.04896\t0.11419\t0.31923\t0.23266\t0.09232\t0.02408\t0.01759\t0.02123\t0.01293\t0.01674\t0.01051\t0.00686\t0.00715\t0.00214\t0.01061\t0.00612\t0.00359\t0.00994\n+25\t0.02536\t0.01503\t0.01847\t0.07411\t0.06906\t0.04201\t0.01265\t0.19811\t0.02297\t0.30790\t0.05079\t0.05751\t0.05303\t0.00988\t0.00746\t0.00227\t0.00707\t0.00812\t0.00723\t0.01098\n+26\t0.01149\t0.00777\t0.00947\t0.00890\t0.01113\t0.00689\t0.00672\t0.01425\t0.01899\t0.08065\t0.40766\t0.08568\t0.27151\t0.01589\t0.00851\t0.00237\t0.00377\t0.01371\t0.00762\t0.00703\n+27\t0.01911\t0.02182\t0.08495\t0.06250\t0.38854\t0.14038\t0.05036\t0.02527\t0.09191\t0.02314\t0.01498\t0.01806\t0.01203\t0.00709\t0.00715\t0.00218\t0.00950\t0.00636\t0.00399\t0.01068\n+28\t0.01023\t0.00746\t0.00945\t0.00971\t0.01120\t0.00700\t0.00737\t0.01280\t0.01739\t0.02346\t0.32739\t0.12733\t0.14757\t0.10269\t0.01228\t0.00315\t0.00464\t0.14553\t0.00701\t0.00634\n+29\t0.01057\t0.00705\t0.00793\t0.00793\t0.00793\t0.00705\t0.00440\t0.01057\t0.01057\t0.01409\t0.02290\t0.04757\t0.02643\t0.74454\t0.03700\t0.00705\t0.00705\t0.01057\t0.00440\t0.00440\n+30\t0.01521\t0.00963\t0.01118\t0.00993\t0.01250\t0.01003\t0.03488\t0.08933\t0.07525\t0.02898\t0.07781\t0.02803\t0.02200\t0.01094\t0.03525\t0.00230\t0.00512\t0.00751\t0.50622\t0.00790\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t10\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W08R7.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W09HB.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W09HB.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,581 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+9\t86\n+\n+[block]\n+# block no. 0 follows, 36 sequences, length 16\n+# corresponding to MSA columns:\n+# 86-101\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01502\t0.01593\t0.06705\t0.06213\t0.57360\t0.01489\t0.12091\t0.01916\t0.01414\t0.02010\t0.01179\t0.01554\t0.00964\t0.00555\t0.00633\t0.00190\t0.00799\t0.00576\t0.00306\t0.00951\n+1\t0.01474\t0.01503\t0.02135\t0.23706\t0.34625\t0.11345\t0.05078\t0.01818\t0.01417\t0.01828\t0.03568\t0.06151\t0.01257\t0.00690\t0.00631\t0.00194\t0.00796\t0.00633\t0.00330\t0.00820\n+2\t0.02353\t0.01219\t0.02013\t0.06043\t0.04979\t0.01114\t0.16913\t0.02673\t0.01667\t0.51180\t0.02059\t0.01972\t0.01344\t0.00699\t0.00650\t0.00197\t0.00673\t0.00644\t0.00621\t0.00986\n+3\t0.00759\t0.00542\t0.00723\t0.00868\t0.00904\t0.00506\t0.00578\t0.00868\t0.01193\t0.01591\t0.03434\t0.77697\t0.04121\t0.01952\t0.00795\t0.00253\t0.00361\t0.01771\t0.00578\t0.00506\n+4\t0.01888\t0.01498\t0.02903\t0.02212\t0.06684\t0.01400\t0.44856\t0.05422\t0.01621\t0.22567\t0.01604\t0.01789\t0.01121\t0.00606\t0.00693\t0.00203\t0.00870\t0.00687\t0.00457\t0.00920\n+5\t0.02441\t0.04436\t0.07466\t0.01538\t0.11424\t0.01141\t0.01177\t0.05846\t0.01728\t0.53085\t0.02073\t0.01907\t0.01357\t0.00717\t0.00613\t0.00189\t0.00602\t0.00589\t0.00642\t0.01029\n+6\t0.01177\t0.01107\t0.01869\t0.76606\t0.04291\t0.01384\t0.01730\t0.01592\t0.01246\t0.01592\t0.01107\t0.01661\t0.00831\t0.00623\t0.00623\t0.00208\t0.00831\t0.00554\t0.00277\t0.00692\n+7\t0.00854\t0.00647\t0.00794\t0.00861\t0.01006\t0.00599\t0.00678\t0.01054\t0.01396\t0.01781\t0.10674\t0.16608\t0.29478\t0.05691\t0.00916\t0.00263\t0.00425\t0.25162\t0.00576\t0.00537\n+8\t0.01963\t0.03954\t0.01964\t0.07492\t0.14275\t0.34760\t0.04518\t0.10876\t0.03873\t0.03931\t0.05506\t0.01574\t0.01227\t0.00678\t0.00601\t0.00177\t0.00885\t0.00530\t0.00394\t0.00822\n+9\t0.17296\t0.01568\t0.01783\t0.05924\t0.09628\t0.14437\t0.10619\t0.08152\t0.03398\t0.04283\t0.01359\t0.05222\t0.01128\t0.00716\t0.00641\t0.00192\t0.04397\t0.00578\t0.07904\t0.00776\n+10\t0.03923\t0.04745\t0.01903\t0.05244\t0.05085\t0.22632\t0.08178\t0.11341\t0.12866\t0.02196\t0.01342\t0.01481\t0.01049\t0.00634\t0.00576\t0.00168\t0.00781\t0.00507\t0.00414\t0.14934\n+11\t0.01807\t0.06921\t0.03994\t0.08807\t0.08140\t0.09959\t0.03906\t0.24727\t0.09443\t0.04188\t0.01667\t0.07629\t0.01417\t0.00826\t0.00628\t0.00195\t0.00719\t0.03667\t0.00482\t0.00879\n+12\t0.05799\t0.01554\t0.01543\t0.03240\t0.04588\t0.15382\t0.03031\t0.18373\t0.05360\t0.04192\t0.04298\t0.09860\t0.08449\t0.00933\t0.00717\t0.00194\t0.05564\t0.00735\t0.00483\t0.05704\n+13\t0.10275\t0.01597\t0.01507\t0.06098\t0.03731\t0.20261\t0.04219\t0.06951\t0.07487\t0.07831\t0.03826\t0.04913\t0.09876\t0.00850\t0.00655\t0.00191\t0.03564\t0.00664\t0.02792\t0.02711\n+14\t0.05521\t0.04733\t0.06278\t0.07749\t0.09544\t0.06529\t0.02964\t0.21311\t0.14823\t0.07810\t0.03556\t0.01718\t0.01286\t0.00706\t0.00601\t0.00189\t0.00683\t0.00569\t0.00496\t0.02937\n+15\t0.13615\t0.05539\t0.08902\t0.01478\t0.07220\t0.13596\t0.03191\t0.12796\t0.04897\t0.06630\t0.02880\t0.05698\t0.01235\t0.00713\t0.00563\t0.00178\t0.00698\t0.00555\t0.00435\t0.09181\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+2\t23\n+\n+[block]\n+# block no. 1 follows, 36 sequences, length 20\n+# corresponding to MSA columns:\n+# 125-144\n+name=unknown_B\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01667\t0.15017\t0.10484\t0.12085\t0.02108\t0.06769\t0.01250\t0.15002\t0.01652\t0.07867\t0.04554\t0.01665\t0.01229\t0.01098\t0.08736\t0.00262\t0.00823\t0.00525\t0.00412\t0.06795\n+1\t0.01585\t0.03482\t0.04096\t0.01263\t0.01639\t0.07187\t0.07904\t0.12627\t0.08030\t0.08227\t0.03429\t0.04675\t0.08916\t0.10049\t0.00963\t0.00236\t0.02301\t0.02598\t0.00487\t0.10306\n+2\t0.01491\t0.05695\t0.03536\t0.03078\t0.16138\t0.01271\t0.05064\t0.15088\t0.02812\t0.03877\t0.04405\t0.07326\t0.07605\t0.05334\t0.00761\t0.00202\t0.00605\t0.00715\t0.02215\t0.12781\n+3\t0.04596\t0.09045\t0.01497\t0.05477\t0.03079\t0.15442\t0.00935\t0.06325\t0.04180\t0.06921\t0.13345\t0.06071\t0.05942\t0.00980\t0.02633\t0.00200\t0.00645\t0.01758\t0.03770\t0.07161\n+4\t0.10454\t0.04666\t0.01748\t0.01383\t0.04517\t0.08750\t0.05089\t0.24133\t0.03661\t0.15564\t0.02778\t0.01590\t0.01166\t0.00677\t0.00571\t0.00175\t0.00657\t0.00529\t0.02724\t'..b'0974\t0.00589\t0.03987\t0.00947\t0.01172\t0.01543\t0.03276\t0.48235\t0.10337\t0.18885\t0.01321\t0.00326\t0.00452\t0.03728\t0.00521\t0.00498\n+14\t0.05357\t0.01724\t0.01650\t0.01481\t0.05646\t0.18923\t0.02851\t0.23033\t0.04989\t0.02449\t0.01553\t0.11870\t0.01405\t0.00859\t0.00688\t0.00187\t0.04979\t0.00669\t0.00465\t0.09223\n+15\t0.01640\t0.07497\t0.14570\t0.04338\t0.14108\t0.03336\t0.01348\t0.09299\t0.03511\t0.09719\t0.01383\t0.03590\t0.01089\t0.00630\t0.00562\t0.00163\t0.00663\t0.00516\t0.00410\t0.21625\n+16\t0.01656\t0.13141\t0.14543\t0.07434\t0.12214\t0.04721\t0.01408\t0.10803\t0.01556\t0.09223\t0.01470\t0.04376\t0.02551\t0.00820\t0.02540\t0.00206\t0.05037\t0.00564\t0.02617\t0.03120\n+17\t0.00888\t0.00727\t0.00805\t0.00821\t0.00988\t0.02667\t0.00617\t0.01171\t0.05475\t0.01925\t0.21367\t0.19158\t0.31969\t0.01523\t0.00748\t0.00221\t0.00374\t0.07386\t0.00600\t0.00572\n+18\t0.00787\t0.00564\t0.00748\t0.00848\t0.00910\t0.00525\t0.00581\t0.00938\t0.01323\t0.01798\t0.19542\t0.60997\t0.04523\t0.01797\t0.00781\t0.00240\t0.00346\t0.01624\t0.00603\t0.00525\n+19\t0.09848\t0.02038\t0.24361\t0.05780\t0.19296\t0.03959\t0.07940\t0.09597\t0.01505\t0.02240\t0.02664\t0.01473\t0.00978\t0.00638\t0.00677\t0.00197\t0.05058\t0.00527\t0.00342\t0.00881\n+20\t0.01550\t0.02798\t0.01754\t0.11235\t0.02016\t0.05005\t0.05712\t0.14023\t0.09078\t0.04725\t0.04801\t0.07601\t0.03869\t0.00945\t0.01000\t0.00218\t0.19895\t0.00713\t0.02275\t0.00784\n+21\t0.00904\t0.00629\t0.00751\t0.00792\t0.00848\t0.00617\t0.00542\t0.00991\t0.01094\t0.01427\t0.02780\t0.09056\t0.09741\t0.48824\t0.02270\t0.00473\t0.00555\t0.16810\t0.00453\t0.00444\n+22\t0.01161\t0.00581\t0.00581\t0.00581\t0.00726\t0.00581\t0.00436\t0.01452\t0.01307\t0.02323\t0.02033\t0.02323\t0.01597\t0.00726\t0.00436\t0.00145\t0.00290\t0.00581\t0.81562\t0.00581\n+23\t0.01855\t0.04932\t0.02039\t0.24141\t0.05237\t0.10244\t0.07231\t0.26867\t0.01953\t0.05310\t0.01311\t0.01545\t0.00971\t0.00664\t0.00610\t0.00189\t0.00795\t0.00548\t0.02694\t0.00865\n+24\t0.01867\t0.03903\t0.05529\t0.01183\t0.01676\t0.01312\t0.01010\t0.20793\t0.12075\t0.15552\t0.05999\t0.01834\t0.01494\t0.00705\t0.00580\t0.00165\t0.00559\t0.00563\t0.00556\t0.22645\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+2\t5\n+\n+[block]\n+# block no. 11 follows, 36 sequences, length 10\n+# corresponding to MSA columns:\n+# 741-750\n+name=unknown_L\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.07397\t0.04444\t0.09690\t0.02031\t0.14408\t0.01512\t0.17770\t0.07126\t0.08490\t0.07037\t0.01446\t0.03247\t0.01163\t0.03931\t0.00854\t0.00220\t0.07345\t0.00622\t0.00400\t0.00865\n+1\t0.01493\t0.16415\t0.01681\t0.01150\t0.01462\t0.15396\t0.03049\t0.08569\t0.07623\t0.02024\t0.13019\t0.13623\t0.09979\t0.01033\t0.00627\t0.00188\t0.00614\t0.00848\t0.00486\t0.00723\n+2\t0.00923\t0.00704\t0.00911\t0.07512\t0.01253\t0.00724\t0.00708\t0.01217\t0.06920\t0.01748\t0.12885\t0.27805\t0.08585\t0.15507\t0.04705\t0.00336\t0.00520\t0.05960\t0.00523\t0.00557\n+3\t0.01404\t0.31101\t0.48347\t0.01513\t0.02290\t0.01824\t0.01844\t0.01933\t0.01297\t0.01785\t0.01025\t0.01198\t0.00793\t0.00570\t0.00521\t0.00174\t0.00827\t0.00413\t0.00264\t0.00876\n+4\t0.01782\t0.01410\t0.01627\t0.23392\t0.02411\t0.06968\t0.01214\t0.30712\t0.02001\t0.05636\t0.01601\t0.08309\t0.01311\t0.00808\t0.00617\t0.00193\t0.00690\t0.00658\t0.07825\t0.00835\n+5\t0.00979\t0.00628\t0.00807\t0.00847\t0.00966\t0.00575\t0.00605\t0.01142\t0.01377\t0.08184\t0.17401\t0.41206\t0.12082\t0.06058\t0.00902\t0.00253\t0.00381\t0.04434\t0.00605\t0.00569\n+6\t0.01410\t0.08018\t0.02112\t0.05677\t0.37669\t0.01361\t0.05626\t0.01861\t0.07096\t0.02058\t0.06186\t0.05059\t0.01561\t0.00704\t0.00599\t0.00184\t0.00635\t0.00650\t0.10686\t0.00851\n+7\t0.00918\t0.00636\t0.00843\t0.00843\t0.00913\t0.00695\t0.00595\t0.01059\t0.00988\t0.01423\t0.01812\t0.03073\t0.01836\t0.32975\t0.41419\t0.00778\t0.01144\t0.00754\t0.06807\t0.00489\n+8\t0.01868\t0.05896\t0.01866\t0.08029\t0.02038\t0.12572\t0.06212\t0.24944\t0.12002\t0.04622\t0.03331\t0.03922\t0.01334\t0.00769\t0.00671\t0.00191\t0.03953\t0.00608\t0.04300\t0.00871\n+9\t0.03697\t0.09360\t0.02018\t0.05103\t0.14927\t0.20996\t0.06192\t0.06246\t0.05633\t0.05498\t0.07714\t0.04965\t0.01544\t0.00752\t0.00640\t0.00184\t0.02692\t0.00614\t0.00412\t0.00813\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+6\t28\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W09HB.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W0CIU.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W0CIU.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,319 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+5\t46\n+\n+[block]\n+# block no. 0 follows, 38 sequences, length 6\n+# corresponding to MSA columns:\n+# 47-52\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.07580\t0.01070\t0.03658\t0.01195\t0.01525\t0.01011\t0.10380\t0.11111\t0.01515\t0.16596\t0.02345\t0.18464\t0.07686\t0.01433\t0.09445\t0.00291\t0.00677\t0.00878\t0.02399\t0.00741\n+1\t0.01301\t0.00881\t0.01065\t0.01106\t0.06488\t0.02754\t0.00739\t0.09632\t0.01390\t0.10522\t0.02490\t0.19870\t0.06857\t0.25243\t0.01421\t0.00328\t0.00535\t0.06258\t0.00500\t0.00621\n+2\t0.01143\t0.09962\t0.01390\t0.01086\t0.01265\t0.01186\t0.00876\t0.06624\t0.07008\t0.01687\t0.01677\t0.11029\t0.01616\t0.02734\t0.37804\t0.00578\t0.10600\t0.00714\t0.00379\t0.00642\n+3\t0.01766\t0.02192\t0.09265\t0.02203\t0.17201\t0.30705\t0.16177\t0.05029\t0.01534\t0.01803\t0.01057\t0.01326\t0.00850\t0.00607\t0.00684\t0.00181\t0.05805\t0.00505\t0.00310\t0.00803\n+4\t0.01110\t0.08303\t0.01184\t0.01081\t0.06559\t0.06934\t0.00720\t0.01226\t0.01083\t0.01377\t0.01780\t0.03398\t0.01919\t0.41469\t0.10677\t0.00484\t0.00755\t0.09063\t0.00363\t0.00517\n+5\t0.01223\t0.01450\t0.15480\t0.01526\t0.14099\t0.01024\t0.01189\t0.01676\t0.05894\t0.02023\t0.10149\t0.02064\t0.03964\t0.00675\t0.00558\t0.00152\t0.00557\t0.02812\t0.00392\t0.33092\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+4\t20\n+\n+[block]\n+# block no. 1 follows, 38 sequences, length 26\n+# corresponding to MSA columns:\n+# 73-98\n+name=unknown_B\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.25149\t0.14113\t0.01520\t0.00997\t0.01415\t0.08546\t0.00832\t0.05911\t0.03392\t0.11335\t0.06561\t0.01483\t0.01249\t0.00626\t0.00476\t0.00157\t0.00554\t0.00448\t0.00432\t0.14804\n+1\t0.07348\t0.03934\t0.09680\t0.01255\t0.01712\t0.07805\t0.08044\t0.07005\t0.06659\t0.09585\t0.07928\t0.04540\t0.01554\t0.02752\t0.00630\t0.00177\t0.00624\t0.00589\t0.00444\t0.17736\n+2\t0.08510\t0.23408\t0.01867\t0.04879\t0.01552\t0.08762\t0.04348\t0.03912\t0.02883\t0.01637\t0.01269\t0.04703\t0.01215\t0.11685\t0.10930\t0.00332\t0.06561\t0.00559\t0.00330\t0.00658\n+3\t0.35836\t0.00885\t0.00838\t0.00776\t0.01002\t0.00953\t0.00573\t0.01427\t0.02999\t0.04830\t0.01823\t0.05324\t0.07276\t0.24103\t0.06152\t0.00355\t0.00559\t0.00657\t0.00409\t0.03222\n+4\t0.01246\t0.01056\t0.03903\t0.06333\t0.03420\t0.01068\t0.00844\t0.12065\t0.17397\t0.02060\t0.06523\t0.04484\t0.09549\t0.24432\t0.01370\t0.00315\t0.00550\t0.02223\t0.00485\t0.00679\n+5\t0.01619\t0.01600\t0.07018\t0.02326\t0.15347\t0.03000\t0.36561\t0.04394\t0.09232\t0.10516\t0.01459\t0.01677\t0.01076\t0.00585\t0.00652\t0.00194\t0.00829\t0.00637\t0.00393\t0.00885\n+6\t0.01180\t0.01118\t0.01773\t0.49506\t0.05675\t0.01425\t0.01521\t0.01500\t0.01157\t0.01566\t0.03468\t0.01810\t0.01061\t0.00778\t0.00977\t0.00219\t0.21140\t0.03167\t0.00291\t0.00668\n+7\t0.02122\t0.01675\t0.01688\t0.01353\t0.01790\t0.07746\t0.01096\t0.50091\t0.18339\t0.05351\t0.01650\t0.01608\t0.01195\t0.00735\t0.00599\t0.00184\t0.00651\t0.00561\t0.00585\t0.00981\n+8\t0.06401\t0.01299\t0.02198\t0.01963\t0.12843\t0.01318\t0.25928\t0.06407\t0.08114\t0.07788\t0.01608\t0.08407\t0.01372\t0.03165\t0.05228\t0.00257\t0.03770\t0.00720\t0.00412\t0.00803\n+9\t0.06281\t0.01403\t0.03314\t0.04081\t0.01793\t0.04917\t0.03358\t0.22506\t0.11750\t0.29667\t0.01842\t0.01763\t0.01268\t0.00801\t0.02309\t0.00204\t0.00635\t0.00571\t0.00594\t0.00945\n+10\t0.01355\t0.01107\t0.01287\t0.00927\t0.01456\t0.00871\t0.00745\t0.06050\t0.01361\t0.04244\t0.01131\t0.01283\t0.00917\t0.00472\t0.00460\t0.00098\t0.00461\t0.00375\t0.00383\t0.75017\n+11\t0.01027\t0.00728\t0.00835\t0.00782\t0.01004\t0.00668\t0.00614\t0.06519\t0.01585\t0.07182\t0.21508\t0.04989\t0.40942\t0.01352\t0.00706\t0.00204\t0.00365\t0.07790\t0.00599\t0.00601\n+12\t0.01444\t0.01238\t0.01315\t0.01186\t0.01511\t0.01421\t0.00921\t0.03030\t0.68177\t0.02508\t0.08292\t0.02426\t0.02147\t0.00850\t0.00620\t0.00203\t0.00461\t0.00713\t0.00616\t0.00921\n+13\t0.01471\t0.01264\t0.01342\t0.01219\t0.01549\t0.01458\t0.00953\t0.03104\t0.70555\t0.02482\t0.02484\t0.02461\t0.01914\t0.00856\t0.00623\t0.00208\t0.00480\t0.04036\t0.00609\t0.00933\n+14\t0.53004\t0.01166\t0.01067\t0.00926\t0.01307\t0.01300\t0.00752\t0.02254\t0.15877\t0.15005\t0.01423\t0.01414\t0.01033\t0.00642\t0.00460\t0.00190\t0.00475\t0.00445\t0.00484\t0.007'..b'143\t0.01337\t0.01671\t0.01537\t0.01203\t0.01537\t0.01069\t0.01604\t0.00802\t0.00601\t0.00601\t0.00200\t0.00802\t0.00535\t0.00267\t0.00668\n+19\t0.01608\t0.79220\t0.03152\t0.01029\t0.01544\t0.02380\t0.01029\t0.01801\t0.01222\t0.01415\t0.00836\t0.00965\t0.00772\t0.00515\t0.00386\t0.00129\t0.00643\t0.00322\t0.00257\t0.00772\n+20\t0.07376\t0.00967\t0.01138\t0.00951\t0.01300\t0.00955\t0.00762\t0.02511\t0.16193\t0.36885\t0.02180\t0.02067\t0.01518\t0.00735\t0.00543\t0.00178\t0.00441\t0.00590\t0.21845\t0.00864\n+21\t0.01164\t0.01085\t0.01856\t0.66480\t0.06503\t0.01308\t0.05513\t0.01562\t0.01224\t0.01612\t0.01128\t0.01635\t0.00853\t0.00599\t0.00597\t0.00197\t0.00782\t0.00546\t0.04673\t0.00681\n+22\t0.07526\t0.01642\t0.01689\t0.01317\t0.01779\t0.06320\t0.01081\t0.55360\t0.02504\t0.12562\t0.01490\t0.01468\t0.01042\t0.00708\t0.00584\t0.00180\t0.00657\t0.00526\t0.00587\t0.00979\n+23\t0.00992\t0.07644\t0.00992\t0.00815\t0.00925\t0.04905\t0.00580\t0.01076\t0.01068\t0.01348\t0.02367\t0.10083\t0.10697\t0.35575\t0.11551\t0.03480\t0.00692\t0.04345\t0.00392\t0.00474\n+24\t0.01398\t0.01249\t0.01461\t0.01078\t0.01581\t0.04649\t0.04576\t0.07815\t0.01404\t0.02075\t0.01092\t0.01279\t0.00894\t0.00504\t0.00536\t0.00113\t0.03464\t0.00399\t0.00369\t0.64063\n+25\t0.01436\t0.01389\t0.02416\t0.09048\t0.62339\t0.01400\t0.06701\t0.01805\t0.01372\t0.01945\t0.03582\t0.01607\t0.01096\t0.00562\t0.00608\t0.00182\t0.00728\t0.00566\t0.00308\t0.00909\n+26\t0.00854\t0.00631\t0.00889\t0.00889\t0.00982\t0.00707\t0.00663\t0.01025\t0.00972\t0.01366\t0.01910\t0.02845\t0.05650\t0.18228\t0.58618\t0.00853\t0.01348\t0.00722\t0.00343\t0.00503\n+27\t0.01548\t0.01479\t0.02488\t0.08571\t0.02524\t0.01588\t0.32385\t0.16342\t0.10193\t0.02266\t0.01392\t0.03561\t0.01096\t0.00702\t0.00835\t0.00207\t0.10936\t0.00658\t0.00399\t0.00830\n+28\t0.00854\t0.00740\t0.01122\t0.00999\t0.01203\t0.00669\t0.11545\t0.01073\t0.01381\t0.01803\t0.18368\t0.26156\t0.28933\t0.01415\t0.00727\t0.00212\t0.00422\t0.01277\t0.00541\t0.00560\n+29\t0.35512\t0.01090\t0.01184\t0.00958\t0.01377\t0.01095\t0.00789\t0.04454\t0.01468\t0.41869\t0.03498\t0.01653\t0.01236\t0.00680\t0.00512\t0.00186\t0.00492\t0.00501\t0.00586\t0.00860\n+30\t0.01010\t0.00847\t0.00884\t0.00832\t0.01041\t0.03290\t0.00625\t0.01566\t0.18843\t0.02053\t0.24690\t0.04218\t0.29003\t0.05455\t0.00803\t0.00217\t0.00380\t0.01007\t0.02605\t0.00631\n+31\t0.00895\t0.00620\t0.00686\t0.00671\t0.00838\t0.00571\t0.00501\t0.02902\t0.01457\t0.02047\t0.23442\t0.08868\t0.31088\t0.01235\t0.00637\t0.00185\t0.00305\t0.01048\t0.21455\t0.00549\n+32\t0.01619\t0.10104\t0.01615\t0.01236\t0.01602\t0.06426\t0.00992\t0.09365\t0.53279\t0.02429\t0.02094\t0.02045\t0.01607\t0.00778\t0.00586\t0.00192\t0.00552\t0.02013\t0.00551\t0.00914\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+1\t2\n+\n+[block]\n+# block no. 6 follows, 38 sequences, length 7\n+# corresponding to MSA columns:\n+# 294-300\n+name=unknown_G\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.05286\t0.23850\t0.15343\t0.01594\t0.08273\t0.08953\t0.06896\t0.12641\t0.01581\t0.08512\t0.01169\t0.01294\t0.00892\t0.00589\t0.00528\t0.00167\t0.00748\t0.00456\t0.00368\t0.00859\n+1\t0.68141\t0.08182\t0.01163\t0.00885\t0.01264\t0.08693\t0.00734\t0.01832\t0.01107\t0.02468\t0.00846\t0.00987\t0.00674\t0.00561\t0.00390\t0.00178\t0.00541\t0.00331\t0.00356\t0.00667\n+2\t0.01084\t0.00712\t0.00841\t0.00771\t0.00966\t0.00683\t0.00589\t0.04921\t0.04952\t0.06484\t0.40564\t0.03893\t0.14590\t0.01108\t0.00643\t0.00183\t0.00327\t0.00948\t0.15119\t0.00624\n+3\t0.04218\t0.01748\t0.19430\t0.01534\t0.07807\t0.05936\t0.04927\t0.12165\t0.11178\t0.02264\t0.09217\t0.06371\t0.07146\t0.00843\t0.00649\t0.00194\t0.02417\t0.00701\t0.00446\t0.00810\n+4\t0.00788\t0.00612\t0.00717\t0.00691\t0.00860\t0.00541\t0.00518\t0.01013\t0.01554\t0.02059\t0.43955\t0.05075\t0.36730\t0.01362\t0.00710\t0.00195\t0.00293\t0.01169\t0.00616\t0.00541\n+5\t0.01522\t0.09663\t0.25634\t0.01961\t0.12625\t0.01617\t0.13252\t0.13288\t0.07957\t0.02207\t0.01254\t0.01444\t0.00952\t0.00612\t0.00636\t0.00187\t0.03415\t0.00528\t0.00356\t0.00893\n+6\t0.51302\t0.14545\t0.05695\t0.01029\t0.04448\t0.01469\t0.00874\t0.01837\t0.01141\t0.06614\t0.00968\t0.01093\t0.00755\t0.00555\t0.00414\t0.00170\t0.00532\t0.00359\t0.00364\t0.05837\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+8\t18\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W0CIU.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W0DGR.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W0DGR.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,248 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+17\t81\n+\n+[block]\n+# block no. 0 follows, 31 sequences, length 13\n+# corresponding to MSA columns:\n+# 102-114\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01605\t0.01785\t0.12492\t0.15234\t0.32647\t0.01507\t0.08790\t0.02075\t0.01518\t0.05380\t0.01334\t0.01695\t0.01039\t0.00624\t0.00670\t0.00201\t0.00849\t0.00596\t0.00357\t0.09601\n+1\t0.01562\t0.31021\t0.22505\t0.06927\t0.05495\t0.05811\t0.01612\t0.01972\t0.01397\t0.01807\t0.01207\t0.01530\t0.01016\t0.01321\t0.11792\t0.00324\t0.01026\t0.00495\t0.00309\t0.00871\n+2\t0.01934\t0.20946\t0.02568\t0.01626\t0.02034\t0.13531\t0.10537\t0.10636\t0.01676\t0.05001\t0.01282\t0.01688\t0.01105\t0.06723\t0.01115\t0.00239\t0.13647\t0.00575\t0.00396\t0.02741\n+3\t0.03705\t0.00960\t0.01030\t0.06894\t0.01377\t0.06514\t0.00766\t0.01287\t0.01307\t0.01694\t0.03030\t0.15493\t0.13911\t0.23696\t0.08735\t0.00447\t0.00738\t0.04984\t0.00480\t0.02951\n+4\t0.00953\t0.00684\t0.00893\t0.00973\t0.01077\t0.00634\t0.00695\t0.01106\t0.01364\t0.01849\t0.08683\t0.45784\t0.04038\t0.08734\t0.01147\t0.02774\t0.00463\t0.11006\t0.00596\t0.06546\n+5\t0.04486\t0.01396\t0.01530\t0.08372\t0.01929\t0.07013\t0.01074\t0.12343\t0.16524\t0.13619\t0.07294\t0.07628\t0.02026\t0.01073\t0.00851\t0.06692\t0.00646\t0.00772\t0.00600\t0.04133\n+6\t0.05064\t0.51091\t0.08725\t0.04034\t0.01988\t0.10115\t0.01301\t0.02236\t0.06518\t0.01819\t0.01130\t0.01275\t0.00962\t0.00635\t0.00503\t0.00167\t0.00794\t0.00425\t0.00334\t0.00885\n+7\t0.01568\t0.09483\t0.01468\t0.01148\t0.01425\t0.08739\t0.00912\t0.01981\t0.08575\t0.11248\t0.21363\t0.16228\t0.03589\t0.01299\t0.00746\t0.00226\t0.00566\t0.08023\t0.00632\t0.00780\n+8\t0.01032\t0.00738\t0.00904\t0.00967\t0.01060\t0.00726\t0.00671\t0.06551\t0.01430\t0.01892\t0.03409\t0.44689\t0.07508\t0.18197\t0.01433\t0.00357\t0.00500\t0.06764\t0.00590\t0.00581\n+9\t0.00880\t0.00638\t0.00829\t0.00964\t0.01038\t0.00598\t0.00684\t0.01028\t0.01359\t0.01781\t0.03976\t0.54961\t0.10844\t0.05709\t0.01007\t0.00298\t0.00441\t0.11779\t0.00623\t0.00562\n+10\t0.01478\t0.08642\t0.02312\t0.50386\t0.03906\t0.01701\t0.07174\t0.05462\t0.08398\t0.02013\t0.01383\t0.01819\t0.01049\t0.00697\t0.00671\t0.00220\t0.00869\t0.00618\t0.00365\t0.00838\n+11\t0.01621\t0.17578\t0.40638\t0.01803\t0.07619\t0.01683\t0.01922\t0.02180\t0.01532\t0.08918\t0.07004\t0.01777\t0.01419\t0.00714\t0.00626\t0.00201\t0.00842\t0.00562\t0.00385\t0.00975\n+12\t0.00901\t0.00653\t0.00840\t0.00922\t0.01016\t0.00610\t0.00656\t0.01084\t0.01483\t0.01989\t0.19882\t0.40698\t0.10818\t0.07465\t0.01055\t0.00291\t0.00418\t0.08001\t0.00646\t0.00575\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+6\t18\n+\n+[block]\n+# block no. 1 follows, 31 sequences, length 6\n+# corresponding to MSA columns:\n+# 137-142\n+name=unknown_B\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.09577\t0.09388\t0.07624\t0.01438\t0.01963\t0.15583\t0.01244\t0.19606\t0.10820\t0.05326\t0.01500\t0.01560\t0.01138\t0.00723\t0.00601\t0.00187\t0.00782\t0.00524\t0.00501\t0.09913\n+1\t0.00977\t0.00733\t0.01100\t0.01100\t0.01222\t0.00855\t0.00855\t0.01222\t0.01100\t0.01588\t0.01833\t0.02688\t0.01710\t0.05131\t0.73245\t0.01100\t0.01833\t0.00733\t0.00367\t0.00611\n+2\t0.01066\t0.06915\t0.01392\t0.01143\t0.01335\t0.00925\t0.07431\t0.01273\t0.01373\t0.01805\t0.07289\t0.24696\t0.10645\t0.13477\t0.08076\t0.00395\t0.00692\t0.08928\t0.00526\t0.00618\n+3\t0.01659\t0.48640\t0.13434\t0.01430\t0.05399\t0.02164\t0.01380\t0.01989\t0.01423\t0.01818\t0.01238\t0.01712\t0.01132\t0.00687\t0.00527\t0.00168\t0.00748\t0.05460\t0.00331\t0.08661\n+4\t0.01283\t0.04006\t0.08467\t0.01103\t0.01416\t0.01000\t0.00949\t0.06469\t0.01569\t0.05256\t0.15607\t0.09245\t0.06434\t0.11242\t0.13964\t0.00424\t0.00794\t0.02741\t0.00527\t0.07501\n+5\t0.04474\t0.09592\t0.08936\t0.06065\t0.02147\t0.01372\t0.10824\t0.04062\t0.03607\t0.02170\t0.04114\t0.06875\t0.01638\t0.01140\t0.06147\t0.00258\t0.00801\t0.04143\t0.00422\t0.21212\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+2\t17\n+\n+[block]\n+# block no. 2 follows, 31 sequences, length 6\n+# corresponding to MSA columns:\n+# 161-166\n+name=unknown_C\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.10874\t0.04947\t0.01714\t0.01352\t0.01744\t0.1046'..b'4266\t0.10685\t0.01478\t0.10322\t0.01682\t0.02070\t0.01146\t0.01328\t0.00951\t0.00823\t0.03449\t0.00210\t0.00893\t0.00454\t0.00351\t0.00924\n+31\t0.01275\t0.00638\t0.00638\t0.00638\t0.00797\t0.00638\t0.00478\t0.01594\t0.01435\t0.02551\t0.02232\t0.02551\t0.01754\t0.00797\t0.00478\t0.00159\t0.00319\t0.00638\t0.79755\t0.00638\n+32\t0.01916\t0.01386\t0.01593\t0.01193\t0.01762\t0.01255\t0.00966\t0.17363\t0.06900\t0.11631\t0.01615\t0.01667\t0.01212\t0.00652\t0.00584\t0.00148\t0.00574\t0.00516\t0.00546\t0.46523\n+33\t0.10667\t0.07948\t0.06995\t0.01483\t0.04954\t0.07931\t0.03998\t0.15084\t0.03756\t0.12096\t0.05665\t0.02106\t0.05977\t0.00809\t0.00632\t0.00195\t0.00708\t0.00635\t0.00534\t0.07828\n+34\t0.07343\t0.20322\t0.08721\t0.03912\t0.02332\t0.10514\t0.14088\t0.10852\t0.01749\t0.04356\t0.01341\t0.01699\t0.01090\t0.00696\t0.00618\t0.00192\t0.00868\t0.03190\t0.00406\t0.05712\n+35\t0.05328\t0.13095\t0.07725\t0.01543\t0.02071\t0.11914\t0.06991\t0.20752\t0.02036\t0.06460\t0.04347\t0.01809\t0.03663\t0.00774\t0.00681\t0.00193\t0.03131\t0.00593\t0.00487\t0.06406\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+27\t59\n+\n+[block]\n+# block no. 7 follows, 31 sequences, length 16\n+# corresponding to MSA columns:\n+# 448-463\n+name=unknown_H\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01520\t0.04600\t0.12089\t0.15838\t0.03083\t0.04111\t0.25183\t0.04412\t0.03836\t0.02120\t0.01601\t0.04710\t0.01368\t0.00807\t0.00776\t0.00227\t0.03053\t0.06091\t0.00386\t0.04188\n+1\t0.80789\t0.01323\t0.01006\t0.00900\t0.01323\t0.01535\t0.00741\t0.02011\t0.01164\t0.03070\t0.00953\t0.01111\t0.00741\t0.00635\t0.00423\t0.00212\t0.00529\t0.00370\t0.00423\t0.00741\n+2\t0.01466\t0.17766\t0.53107\t0.01721\t0.02615\t0.01756\t0.02122\t0.02108\t0.01432\t0.02061\t0.01172\t0.01374\t0.00881\t0.00626\t0.00597\t0.00194\t0.00915\t0.00470\t0.00299\t0.07319\n+3\t0.01577\t0.01507\t0.02567\t0.24457\t0.52337\t0.01595\t0.02042\t0.01998\t0.01503\t0.02094\t0.01266\t0.01731\t0.01034\t0.00631\t0.00679\t0.00210\t0.00841\t0.00609\t0.00329\t0.00990\n+4\t0.00834\t0.00595\t0.00794\t0.00953\t0.00992\t0.00556\t0.00635\t0.00953\t0.01310\t0.01746\t0.03771\t0.75510\t0.04525\t0.02143\t0.00873\t0.00278\t0.00397\t0.01945\t0.00635\t0.00556\n+5\t0.01419\t0.01216\t0.01419\t0.01013\t0.01621\t0.00912\t0.00811\t0.01723\t0.01419\t0.02229\t0.01216\t0.01419\t0.01013\t0.00507\t0.00507\t0.00101\t0.00507\t0.00405\t0.00405\t0.80139\n+6\t0.00846\t0.00695\t0.00745\t0.00733\t0.00947\t0.00594\t0.00549\t0.01055\t0.01648\t0.02060\t0.22144\t0.06236\t0.56066\t0.01654\t0.00808\t0.00227\t0.00341\t0.01395\t0.00663\t0.00594\n+7\t0.03070\t0.01164\t0.01588\t0.01217\t0.01746\t0.01006\t0.01006\t0.03334\t0.01958\t0.72163\t0.02699\t0.02329\t0.01694\t0.00847\t0.00688\t0.00212\t0.00582\t0.00688\t0.00847\t0.01164\n+8\t0.03070\t0.01164\t0.01588\t0.01217\t0.01746\t0.01006\t0.01006\t0.03334\t0.01958\t0.72163\t0.02699\t0.02329\t0.01694\t0.00847\t0.00688\t0.00212\t0.00582\t0.00688\t0.00847\t0.01164\n+9\t0.01693\t0.01626\t0.02777\t0.04199\t0.71689\t0.01626\t0.02100\t0.02100\t0.01558\t0.02235\t0.01287\t0.01693\t0.01084\t0.00610\t0.00677\t0.00203\t0.00813\t0.00610\t0.00339\t0.01084\n+10\t0.01693\t0.01626\t0.02777\t0.04199\t0.71689\t0.01626\t0.02100\t0.02100\t0.01558\t0.02235\t0.01287\t0.01693\t0.01084\t0.00610\t0.00677\t0.00203\t0.00813\t0.00610\t0.00339\t0.01084\n+11\t0.80789\t0.01323\t0.01006\t0.00900\t0.01323\t0.01535\t0.00741\t0.02011\t0.01164\t0.03070\t0.00953\t0.01111\t0.00741\t0.00635\t0.00423\t0.00212\t0.00529\t0.00370\t0.00423\t0.00741\n+12\t0.01375\t0.01303\t0.01075\t0.01030\t0.01223\t0.17639\t0.00737\t0.01512\t0.01472\t0.04641\t0.03571\t0.09202\t0.24690\t0.19990\t0.07218\t0.00396\t0.00765\t0.01045\t0.00502\t0.00614\n+13\t0.01942\t0.11552\t0.04806\t0.04707\t0.02040\t0.33926\t0.01368\t0.02162\t0.01572\t0.01715\t0.01338\t0.04884\t0.01278\t0.00951\t0.01001\t0.00219\t0.17562\t0.05837\t0.00362\t0.00778\n+14\t0.00995\t0.00789\t0.00914\t0.00910\t0.01056\t0.03878\t0.00663\t0.01251\t0.01759\t0.02389\t0.47086\t0.21679\t0.10927\t0.01570\t0.00814\t0.00229\t0.00383\t0.01385\t0.00698\t0.00626\n+15\t0.11919\t0.01393\t0.03595\t0.10356\t0.08135\t0.06191\t0.03267\t0.06942\t0.01557\t0.02251\t0.10075\t0.02829\t0.09275\t0.10014\t0.01183\t0.00277\t0.08750\t0.00777\t0.00457\t0.00756\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t3\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W0DGR.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W0E07.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W0E07.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,389 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t75\n+\n+[block]\n+# block no. 0 follows, 31 sequences, length 8\n+# corresponding to MSA columns:\n+# 111-118\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01137\t0.00833\t0.01309\t0.05863\t0.01594\t0.00796\t0.08460\t0.01351\t0.01422\t0.07339\t0.03401\t0.50463\t0.06871\t0.01742\t0.00839\t0.00264\t0.00537\t0.04519\t0.00598\t0.00662\n+1\t0.01337\t0.01043\t0.01586\t0.27280\t0.11241\t0.01117\t0.01327\t0.01669\t0.01523\t0.07459\t0.09780\t0.03802\t0.11282\t0.06585\t0.00953\t0.00266\t0.00682\t0.09820\t0.00493\t0.00754\n+2\t0.01760\t0.02598\t0.44202\t0.01644\t0.02421\t0.01402\t0.01903\t0.07571\t0.01745\t0.16411\t0.09905\t0.02074\t0.01721\t0.00792\t0.00679\t0.00215\t0.00823\t0.00638\t0.00487\t0.01010\n+3\t0.00856\t0.00642\t0.00779\t0.00878\t0.00979\t0.00586\t0.00613\t0.00994\t0.01377\t0.01763\t0.04581\t0.44892\t0.24392\t0.07847\t0.01065\t0.00297\t0.00418\t0.05867\t0.00617\t0.00556\n+4\t0.01811\t0.01749\t0.05121\t0.12262\t0.26326\t0.10838\t0.01600\t0.02519\t0.16841\t0.07567\t0.01727\t0.02014\t0.01362\t0.04346\t0.00809\t0.00233\t0.00804\t0.00644\t0.00456\t0.00973\n+5\t0.01699\t0.01458\t0.02376\t0.27335\t0.29973\t0.01612\t0.04475\t0.05502\t0.01566\t0.08102\t0.01368\t0.01776\t0.01062\t0.00721\t0.00837\t0.00223\t0.07961\t0.00623\t0.00385\t0.00946\n+6\t0.01269\t0.01177\t0.01966\t0.62371\t0.08437\t0.01426\t0.01781\t0.01687\t0.01374\t0.01778\t0.01486\t0.09487\t0.01299\t0.00831\t0.00703\t0.00232\t0.00852\t0.00747\t0.00341\t0.00759\n+7\t0.01799\t0.01845\t0.06660\t0.07026\t0.42788\t0.09006\t0.08926\t0.02212\t0.01627\t0.06718\t0.03849\t0.01817\t0.01267\t0.00666\t0.00689\t0.00206\t0.00876\t0.00634\t0.00384\t0.01005\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+3\t10\n+\n+[block]\n+# block no. 1 follows, 31 sequences, length 14\n+# corresponding to MSA columns:\n+# 133-146\n+name=unknown_B\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.59575\t0.01560\t0.08782\t0.01054\t0.01557\t0.01489\t0.00961\t0.02098\t0.05427\t0.02876\t0.01120\t0.01265\t0.00863\t0.00642\t0.00473\t0.00203\t0.00580\t0.00413\t0.00424\t0.08638\n+1\t0.06812\t0.01431\t0.04534\t0.01399\t0.07506\t0.04805\t0.03342\t0.01824\t0.01458\t0.02261\t0.03986\t0.01643\t0.01244\t0.00736\t0.02928\t0.00169\t0.00646\t0.00489\t0.02511\t0.50277\n+2\t0.01565\t0.02124\t0.18125\t0.02370\t0.09759\t0.05513\t0.30546\t0.02096\t0.01573\t0.02191\t0.04216\t0.01778\t0.01219\t0.00626\t0.00702\t0.00201\t0.00956\t0.00656\t0.00360\t0.13427\n+3\t0.04090\t0.01447\t0.08598\t0.01789\t0.15960\t0.01121\t0.02937\t0.01930\t0.01537\t0.09749\t0.06018\t0.06165\t0.05255\t0.00792\t0.00634\t0.00175\t0.00618\t0.00685\t0.00472\t0.30028\n+4\t0.01411\t0.01439\t0.11937\t0.01331\t0.05846\t0.01029\t0.01117\t0.01894\t0.06702\t0.07400\t0.13250\t0.06782\t0.08467\t0.00933\t0.00661\t0.00182\t0.00559\t0.00792\t0.00527\t0.27742\n+5\t0.01828\t0.04616\t0.11064\t0.01546\t0.02042\t0.18810\t0.07613\t0.04866\t0.06106\t0.07698\t0.05744\t0.09734\t0.01780\t0.00876\t0.00668\t0.00195\t0.00813\t0.00731\t0.00477\t0.12792\n+6\t0.01555\t0.01335\t0.01806\t0.15259\t0.14288\t0.03359\t0.01292\t0.01886\t0.01476\t0.06339\t0.03217\t0.01818\t0.02931\t0.00679\t0.00703\t0.00169\t0.05096\t0.00555\t0.00408\t0.35827\n+7\t0.01292\t0.01216\t0.02052\t0.74312\t0.04712\t0.01520\t0.01900\t0.01748\t0.01368\t0.01748\t0.01216\t0.01824\t0.00912\t0.00684\t0.00684\t0.00228\t0.00912\t0.00608\t0.00304\t0.00760\n+8\t0.07198\t0.02001\t0.01976\t0.05973\t0.02230\t0.10668\t0.01306\t0.53180\t0.02827\t0.03762\t0.01504\t0.01572\t0.01089\t0.00788\t0.00661\t0.00204\t0.00807\t0.00580\t0.00605\t0.01069\n+9\t0.15653\t0.05027\t0.01840\t0.01622\t0.07365\t0.13489\t0.03073\t0.10746\t0.20101\t0.11687\t0.01802\t0.01800\t0.01336\t0.00768\t0.00624\t0.00208\t0.00731\t0.00590\t0.00555\t0.00983\n+10\t0.01045\t0.00767\t0.00962\t0.00930\t0.00954\t0.00855\t0.00619\t0.01110\t0.01021\t0.01413\t0.01956\t0.03800\t0.02161\t0.53785\t0.17276\t0.00711\t0.08853\t0.00900\t0.00393\t0.00490\n+11\t0.01042\t0.00767\t0.00945\t0.00985\t0.01119\t0.00750\t0.00704\t0.08363\t0.01607\t0.02142\t0.11638\t0.48262\t0.12038\t0.01997\t0.03978\t0.00293\t0.00483\t0.01609\t0.00642\t0.00636\n+12\t0.01537\t0.29809\t0.47586\t0.01669\t0.02526\t0.01992\t0.02038\t0.02124\t0.01425\t0.01966\t0.01128\t0.01319\t0.00871\t0.00627\t0.00574\t0.00191\t0.00910\t0.00455\t0.00290\t0.0'..b'02\t0.00630\t0.00515\t0.00163\t0.00865\t0.00414\t0.00330\t0.00891\n+50\t0.02577\t0.01203\t0.01515\t0.01192\t0.01654\t0.01132\t0.00973\t0.14805\t0.02140\t0.46099\t0.10190\t0.02675\t0.04616\t0.00932\t0.00694\t0.00209\t0.00562\t0.00760\t0.05016\t0.01058\n+51\t0.00834\t0.00595\t0.00794\t0.00953\t0.00992\t0.00556\t0.00635\t0.00953\t0.01310\t0.01746\t0.03771\t0.75510\t0.04525\t0.02143\t0.00873\t0.00278\t0.00397\t0.01945\t0.00635\t0.00556\n+52\t0.01558\t0.01367\t0.02207\t0.22222\t0.08978\t0.04680\t0.16552\t0.05424\t0.01523\t0.04517\t0.01521\t0.02204\t0.01263\t0.04003\t0.01069\t0.10324\t0.00850\t0.03089\t0.05871\t0.00777\n+53\t0.04480\t0.05102\t0.04593\t0.29908\t0.17901\t0.05632\t0.11047\t0.03560\t0.07170\t0.02108\t0.01361\t0.01751\t0.01056\t0.00670\t0.00675\t0.00215\t0.00889\t0.00617\t0.00363\t0.00900\n+54\t0.00947\t0.00706\t0.00914\t0.03221\t0.01216\t0.00677\t0.00789\t0.01150\t0.01446\t0.01865\t0.06090\t0.29380\t0.17906\t0.07288\t0.01066\t0.00305\t0.00497\t0.23342\t0.00611\t0.00583\n+55\t0.01028\t0.00658\t0.00785\t0.00785\t0.00799\t0.00667\t0.00470\t0.01019\t0.01005\t0.01372\t0.02014\t0.03982\t0.02243\t0.59077\t0.08049\t0.10705\t0.00722\t0.00913\t0.03286\t0.00421\n+56\t0.50023\t0.08150\t0.05555\t0.01404\t0.08271\t0.01698\t0.01097\t0.01977\t0.01230\t0.02621\t0.01025\t0.01267\t0.00837\t0.00702\t0.00687\t0.00215\t0.09691\t0.00435\t0.02314\t0.00800\n+57\t0.01188\t0.00966\t0.01091\t0.01083\t0.01302\t0.01020\t0.00805\t0.02046\t0.28311\t0.02300\t0.10350\t0.27631\t0.14264\t0.01528\t0.00790\t0.00248\t0.00445\t0.03187\t0.00670\t0.00775\n+58\t0.01704\t0.01713\t0.09951\t0.04785\t0.02030\t0.08291\t0.04572\t0.08837\t0.09168\t0.08002\t0.05286\t0.11523\t0.01902\t0.01151\t0.03449\t0.00252\t0.08402\t0.00806\t0.00509\t0.07663\n+59\t0.01509\t0.34252\t0.12729\t0.04327\t0.01964\t0.01889\t0.04450\t0.01832\t0.01387\t0.01853\t0.03360\t0.10552\t0.01541\t0.00872\t0.00717\t0.00194\t0.06963\t0.00670\t0.05027\t0.03912\n+60\t0.05488\t0.02132\t0.01858\t0.01562\t0.01943\t0.26138\t0.03268\t0.21955\t0.06958\t0.06614\t0.01531\t0.01750\t0.01205\t0.04469\t0.00915\t0.00227\t0.07086\t0.00585\t0.03399\t0.00916\n+61\t0.01620\t0.04338\t0.01835\t0.12204\t0.07055\t0.01424\t0.04354\t0.19920\t0.02002\t0.02656\t0.06214\t0.04123\t0.02440\t0.01198\t0.00784\t0.00249\t0.00727\t0.25452\t0.00558\t0.00848\n+62\t0.01688\t0.01586\t0.02436\t0.15413\t0.31093\t0.05378\t0.09322\t0.05378\t0.04660\t0.04166\t0.01431\t0.01904\t0.01175\t0.04952\t0.00899\t0.00237\t0.03416\t0.00647\t0.00387\t0.03834\n+63\t0.01430\t0.01252\t0.01567\t0.01120\t0.01732\t0.00958\t0.04696\t0.01749\t0.01430\t0.02227\t0.01226\t0.01443\t0.01015\t0.00511\t0.00524\t0.00109\t0.00543\t0.00428\t0.00402\t0.75639\n+64\t0.00880\t0.00663\t0.00760\t0.00810\t0.00925\t0.00604\t0.00557\t0.01006\t0.01361\t0.01726\t0.06599\t0.25377\t0.30509\t0.20285\t0.01497\t0.00355\t0.00452\t0.04515\t0.00584\t0.00535\n+65\t0.01726\t0.17030\t0.02358\t0.13830\t0.06880\t0.11662\t0.06489\t0.05013\t0.01581\t0.02034\t0.01176\t0.01455\t0.00963\t0.00606\t0.00580\t0.00163\t0.00803\t0.00489\t0.00361\t0.24800\n+66\t0.01032\t0.00698\t0.00810\t0.00812\t0.00852\t0.00718\t0.00501\t0.01161\t0.03882\t0.01513\t0.02232\t0.07561\t0.02445\t0.57379\t0.10125\t0.00639\t0.00742\t0.00983\t0.05431\t0.00483\n+67\t0.03866\t0.12932\t0.05854\t0.08157\t0.13766\t0.21504\t0.06987\t0.07276\t0.05501\t0.03618\t0.01466\t0.01675\t0.03058\t0.00709\t0.00635\t0.00195\t0.00918\t0.00568\t0.00397\t0.00915\n+68\t0.01142\t0.01006\t0.03924\t0.01606\t0.11997\t0.00881\t0.05123\t0.01403\t0.01473\t0.03699\t0.07565\t0.36491\t0.08499\t0.01552\t0.00806\t0.00247\t0.00548\t0.06891\t0.00561\t0.04585\n+69\t0.03612\t0.11341\t0.10550\t0.06891\t0.09656\t0.07655\t0.13185\t0.02316\t0.10862\t0.04129\t0.03744\t0.01790\t0.01306\t0.00700\t0.00686\t0.00200\t0.02635\t0.00608\t0.00410\t0.07723\n+70\t0.06129\t0.00808\t0.01008\t0.01048\t0.04246\t0.00753\t0.00735\t0.01374\t0.01614\t0.05693\t0.28460\t0.20809\t0.13361\t0.03284\t0.00841\t0.00239\t0.00420\t0.03670\t0.00644\t0.04864\n+71\t0.10133\t0.11876\t0.14669\t0.03538\t0.07914\t0.10683\t0.05225\t0.10737\t0.01761\t0.04077\t0.04916\t0.02094\t0.07966\t0.00804\t0.00634\t0.00201\t0.00802\t0.00634\t0.00438\t0.00898\n+72\t0.01523\t0.08087\t0.05360\t0.01412\t0.05601\t0.01291\t0.04920\t0.09089\t0.05841\t0.04356\t0.06392\t0.09386\t0.08159\t0.00965\t0.00665\t0.00189\t0.00606\t0.03162\t0.00513\t0.22483\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t32\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W0E07.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W0EOF.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W0EOF.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,184 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t54\n+\n+[block]\n+# block no. 0 follows, 27 sequences, length 98\n+# corresponding to MSA columns:\n+# 56-115,125-162\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01451\t0.00867\t0.01109\t0.00984\t0.01257\t0.00770\t0.00758\t0.01768\t0.02032\t0.14786\t0.46576\t0.05090\t0.14257\t0.01428\t0.00842\t0.00231\t0.00411\t0.01237\t0.00806\t0.03343\n+1\t0.01757\t0.00984\t0.01264\t0.01100\t0.01410\t0.00927\t0.00857\t0.02273\t0.09003\t0.21257\t0.43958\t0.04429\t0.05096\t0.01300\t0.00828\t0.00234\t0.00452\t0.01127\t0.00839\t0.00904\n+2\t0.01912\t0.01739\t0.02949\t0.04395\t0.65914\t0.01730\t0.02219\t0.02345\t0.01712\t0.05790\t0.01473\t0.01872\t0.01209\t0.00674\t0.00736\t0.00221\t0.00869\t0.00666\t0.00395\t0.01180\n+3\t0.01686\t0.01532\t0.01432\t0.01310\t0.01626\t0.11623\t0.01005\t0.04711\t0.27356\t0.02739\t0.16852\t0.03432\t0.07698\t0.01429\t0.05441\t0.00294\t0.00714\t0.00923\t0.07283\t0.00917\n+4\t0.79154\t0.01436\t0.01091\t0.00976\t0.01436\t0.01665\t0.00804\t0.02182\t0.01263\t0.03331\t0.01034\t0.01206\t0.00804\t0.00689\t0.00459\t0.00230\t0.00574\t0.00402\t0.00459\t0.00804\n+5\t0.53971\t0.01378\t0.01301\t0.01091\t0.01588\t0.01475\t0.00899\t0.02659\t0.01549\t0.25405\t0.01663\t0.01645\t0.01147\t0.00765\t0.00555\t0.00230\t0.00593\t0.00516\t0.00612\t0.00957\n+6\t0.01165\t0.00835\t0.01210\t0.01179\t0.01257\t0.00976\t0.00886\t0.01269\t0.01128\t0.01609\t0.01779\t0.02849\t0.01737\t0.11452\t0.43156\t0.17414\t0.08355\t0.00778\t0.00380\t0.00583\n+7\t0.01499\t0.01404\t0.02361\t0.48572\t0.22613\t0.01617\t0.02029\t0.01969\t0.01583\t0.02117\t0.05934\t0.02182\t0.01450\t0.00773\t0.00749\t0.00239\t0.00916\t0.00707\t0.00373\t0.00914\n+8\t0.01069\t0.00786\t0.01160\t0.01160\t0.01280\t0.00905\t0.00887\t0.01298\t0.01178\t0.01691\t0.01991\t0.03028\t0.01896\t0.10121\t0.64306\t0.03537\t0.01861\t0.00810\t0.00399\t0.00638\n+9\t0.06757\t0.15910\t0.53985\t0.01893\t0.02868\t0.01931\t0.02358\t0.02318\t0.01537\t0.02312\t0.01260\t0.01478\t0.00933\t0.00692\t0.00649\t0.00222\t0.01010\t0.00512\t0.00324\t0.01053\n+10\t0.02045\t0.60616\t0.03555\t0.06078\t0.02168\t0.11365\t0.01344\t0.02294\t0.01581\t0.01765\t0.01066\t0.01262\t0.00956\t0.00659\t0.00518\t0.00169\t0.00875\t0.00425\t0.00327\t0.00933\n+11\t0.63040\t0.01487\t0.01279\t0.01091\t0.01577\t0.01674\t0.00899\t0.09274\t0.01593\t0.10412\t0.01312\t0.01406\t0.00961\t0.00735\t0.00520\t0.00229\t0.00606\t0.00467\t0.00538\t0.00901\n+12\t0.02102\t0.01646\t0.01767\t0.01528\t0.01985\t0.01863\t0.01206\t0.13622\t0.53343\t0.08060\t0.02824\t0.02600\t0.02081\t0.00983\t0.00753\t0.00246\t0.00626\t0.00806\t0.00765\t0.01195\n+13\t0.01400\t0.01268\t0.02078\t0.42038\t0.16364\t0.01442\t0.01774\t0.01849\t0.01673\t0.02259\t0.17678\t0.02815\t0.02480\t0.00914\t0.00773\t0.00239\t0.00814\t0.00825\t0.00455\t0.00862\n+14\t0.01061\t0.00795\t0.01193\t0.01193\t0.01326\t0.00928\t0.00928\t0.01326\t0.01193\t0.01723\t0.01988\t0.02916\t0.01856\t0.05568\t0.70968\t0.01193\t0.01988\t0.00795\t0.00398\t0.00663\n+15\t0.00955\t0.00755\t0.00860\t0.00834\t0.01051\t0.00660\t0.00625\t0.01216\t0.01876\t0.02442\t0.35110\t0.06426\t0.41117\t0.01717\t0.00877\t0.00243\t0.00364\t0.01466\t0.00747\t0.00660\n+16\t0.79154\t0.01436\t0.01091\t0.00976\t0.01436\t0.01665\t0.00804\t0.02182\t0.01263\t0.03331\t0.01034\t0.01206\t0.00804\t0.00689\t0.00459\t0.00230\t0.00574\t0.00402\t0.00459\t0.00804\n+17\t0.02034\t0.37538\t0.21566\t0.01584\t0.02314\t0.06092\t0.01676\t0.07040\t0.05056\t0.06731\t0.01400\t0.01512\t0.01096\t0.00717\t0.00600\t0.00195\t0.00887\t0.00508\t0.00412\t0.01041\n+18\t0.01289\t0.00645\t0.00967\t0.00967\t0.00967\t0.00645\t0.00645\t0.00967\t0.00967\t0.01289\t0.01289\t0.02257\t0.01289\t0.02579\t0.02901\t0.78401\t0.00645\t0.00645\t0.00322\t0.00322\n+19\t0.02748\t0.05979\t0.02174\t0.01878\t0.02282\t0.64766\t0.01427\t0.06422\t0.02158\t0.01971\t0.01178\t0.01358\t0.00973\t0.00767\t0.00667\t0.00192\t0.01291\t0.00486\t0.00400\t0.00886\n+20\t0.11480\t0.02016\t0.02969\t0.04761\t0.07636\t0.09093\t0.28324\t0.12725\t0.06419\t0.04983\t0.01586\t0.01857\t0.01189\t0.00731\t0.00756\t0.00235\t0.01011\t0.00715\t0.00485\t0.01030\n+21\t0.05932\t0.05313\t0.02434\t0.33606\t0.24648\t0.08693\t0.01908\t0.02125\t0.01599\t0.02127\t0.01399\t0.04419\t0.01178\t0.00769\t0.00711\t0.00230\t0.00938\t0.00668\t0.00367\t0.00937\n+22\t0.79154\t0.01436\t0.01091\t0.00976\t0.01436\t0.01665\t0.00804\t0.02182\t0.01263\t0.03331\t0.0'..b'19\t0.00730\t0.00741\t0.00243\t0.00973\t0.00660\t0.00336\t0.00880\n+25\t0.01598\t0.01509\t0.02551\t0.32239\t0.38422\t0.01642\t0.02087\t0.02041\t0.01588\t0.02173\t0.01537\t0.06468\t0.01337\t0.00801\t0.00752\t0.00237\t0.00898\t0.00753\t0.00372\t0.00994\n+26\t0.01543\t0.01465\t0.02456\t0.26330\t0.35117\t0.01554\t0.04258\t0.01967\t0.01616\t0.02180\t0.02207\t0.04897\t0.09464\t0.00890\t0.00767\t0.00237\t0.00855\t0.00826\t0.00405\t0.00968\n+27\t0.01523\t0.04134\t0.02327\t0.45572\t0.14363\t0.01671\t0.01889\t0.01958\t0.01503\t0.02033\t0.01299\t0.01850\t0.01030\t0.00736\t0.00813\t0.00227\t0.05404\t0.00622\t0.00349\t0.10696\n+28\t0.01384\t0.00692\t0.00692\t0.00692\t0.00865\t0.00692\t0.00519\t0.01730\t0.01557\t0.02768\t0.02422\t0.02768\t0.01903\t0.00865\t0.00519\t0.00173\t0.00346\t0.00692\t0.78031\t0.00692\n+29\t0.01561\t0.01366\t0.01702\t0.01226\t0.01883\t0.01067\t0.04532\t0.01966\t0.03748\t0.02439\t0.01386\t0.01606\t0.01140\t0.00569\t0.00575\t0.00122\t0.00590\t0.00477\t0.00447\t0.71598\n+30\t0.01702\t0.34114\t0.41655\t0.01753\t0.02652\t0.02245\t0.02111\t0.02296\t0.01542\t0.02092\t0.01203\t0.01406\t0.00946\t0.00675\t0.00607\t0.00202\t0.00967\t0.00483\t0.00315\t0.01035\n+31\t0.01280\t0.00820\t0.01003\t0.00921\t0.01172\t0.00725\t0.00703\t0.01567\t0.01964\t0.11109\t0.39550\t0.05710\t0.27540\t0.01566\t0.00860\t0.00239\t0.00395\t0.01344\t0.00786\t0.00747\n+32\t0.00987\t0.00756\t0.00905\t0.00868\t0.01070\t0.00674\t0.00651\t0.01278\t0.01952\t0.02622\t0.46471\t0.06129\t0.29642\t0.01650\t0.00876\t0.00240\t0.00360\t0.01424\t0.00771\t0.00674\n+33\t0.01790\t0.02059\t0.04297\t0.03084\t0.03822\t0.04405\t0.64198\t0.02399\t0.01765\t0.02357\t0.01489\t0.01978\t0.01120\t0.00631\t0.00869\t0.00248\t0.01255\t0.00862\t0.00376\t0.00996\n+34\t0.01583\t0.01504\t0.02554\t0.44009\t0.31813\t0.01697\t0.02152\t0.02056\t0.01570\t0.02117\t0.01351\t0.01920\t0.01067\t0.00709\t0.00739\t0.00236\t0.00945\t0.00660\t0.00346\t0.00971\n+35\t0.03310\t0.01297\t0.01743\t0.01337\t0.01912\t0.01141\t0.01104\t0.06207\t0.02181\t0.67126\t0.02882\t0.02496\t0.01814\t0.00918\t0.00746\t0.00229\t0.00639\t0.00743\t0.00912\t0.01263\n+36\t0.01752\t0.02003\t0.04380\t0.03129\t0.03880\t0.01877\t0.66583\t0.02378\t0.01752\t0.02378\t0.01502\t0.02003\t0.01126\t0.00626\t0.00876\t0.00250\t0.01252\t0.00876\t0.00375\t0.01001\n+37\t0.01837\t0.01764\t0.03013\t0.04557\t0.69279\t0.01764\t0.02278\t0.02278\t0.01690\t0.02425\t0.01396\t0.01837\t0.01176\t0.00661\t0.00735\t0.00220\t0.00882\t0.00661\t0.00367\t0.01176\n+38\t0.01042\t0.00748\t0.00828\t0.00825\t0.01036\t0.00673\t0.00629\t0.01312\t0.01768\t0.02414\t0.21555\t0.05948\t0.35971\t0.01597\t0.00815\t0.00237\t0.00383\t0.05341\t0.16217\t0.00662\n+39\t0.03220\t0.01441\t0.01833\t0.01405\t0.01984\t0.01354\t0.01161\t0.17351\t0.02422\t0.55641\t0.02680\t0.02365\t0.01713\t0.00913\t0.00746\t0.00228\t0.00672\t0.00730\t0.00881\t0.01263\n+40\t0.01007\t0.00711\t0.00937\t0.01052\t0.01115\t0.00702\t0.00740\t0.01155\t0.01368\t0.01827\t0.03459\t0.40321\t0.04002\t0.18909\t0.08509\t0.00491\t0.00691\t0.11812\t0.00605\t0.00587\n+41\t0.01180\t0.00843\t0.01178\t0.01349\t0.01512\t0.00841\t0.01168\t0.01510\t0.01693\t0.02204\t0.03940\t0.11981\t0.04308\t0.02066\t0.01021\t0.00340\t0.00670\t0.60836\t0.00684\t0.00679\n+42\t0.03331\t0.01263\t0.01723\t0.01321\t0.01895\t0.01091\t0.01091\t0.03618\t0.02125\t0.69794\t0.02929\t0.02527\t0.01838\t0.00919\t0.00747\t0.00230\t0.00632\t0.00747\t0.00919\t0.01263\n+43\t0.01402\t0.01319\t0.02227\t0.72126\t0.05113\t0.01649\t0.02062\t0.01897\t0.01484\t0.01897\t0.01319\t0.01979\t0.00990\t0.00742\t0.00742\t0.00247\t0.00990\t0.00660\t0.00330\t0.00825\n+44\t0.02830\t0.01877\t0.01856\t0.01510\t0.02012\t0.14830\t0.01209\t0.17846\t0.07464\t0.31900\t0.07060\t0.02363\t0.01940\t0.00933\t0.00741\t0.00223\t0.00787\t0.00727\t0.00755\t0.01139\n+45\t0.01622\t0.01788\t0.03821\t0.02794\t0.03433\t0.01686\t0.55762\t0.02174\t0.01685\t0.02289\t0.01807\t0.09693\t0.01573\t0.01092\t0.04913\t0.00310\t0.01206\t0.01003\t0.00410\t0.00939\n+46\t0.01390\t0.00842\t0.00943\t0.01006\t0.04901\t0.00846\t0.00679\t0.03918\t0.03860\t0.02650\t0.06400\t0.03353\t0.06974\t0.08224\t0.00916\t0.00243\t0.00440\t0.00831\t0.50857\t0.00727\n+47\t0.01909\t0.23971\t0.22756\t0.01861\t0.02597\t0.08305\t0.11735\t0.06856\t0.01789\t0.04542\t0.01733\t0.01906\t0.05372\t0.00773\t0.00676\t0.00211\t0.00972\t0.00628\t0.00405\t0.01005\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t11\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W0EOF.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W0IVU.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W0IVU.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,147 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+14\t117\n+\n+[block]\n+# block no. 0 follows, 27 sequences, length 123\n+# corresponding to MSA columns:\n+# 136-183,206-233,285-305,307-332\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.07166\t0.01473\t0.01922\t0.02045\t0.17246\t0.01471\t0.01327\t0.08495\t0.13432\t0.19177\t0.08909\t0.02467\t0.02093\t0.00882\t0.00720\t0.00219\t0.00657\t0.00744\t0.00661\t0.08894\n+1\t0.06030\t0.02377\t0.27665\t0.05467\t0.17380\t0.01606\t0.01976\t0.04444\t0.07825\t0.07425\t0.02071\t0.02223\t0.06195\t0.00827\t0.00716\t0.00230\t0.00855\t0.00687\t0.00464\t0.03537\n+2\t0.01668\t0.07868\t0.10209\t0.03779\t0.02096\t0.04513\t0.03935\t0.04066\t0.09281\t0.04814\t0.08574\t0.07411\t0.02098\t0.00898\t0.00686\t0.00193\t0.00702\t0.00753\t0.00523\t0.25930\n+3\t0.01943\t0.04174\t0.02122\t0.02410\t0.26169\t0.01400\t0.01439\t0.04427\t0.05798\t0.14328\t0.14443\t0.02640\t0.02435\t0.00878\t0.00728\t0.00208\t0.00667\t0.00773\t0.00592\t0.12427\n+4\t0.01759\t0.01428\t0.02032\t0.02367\t0.26016\t0.01292\t0.01397\t0.02225\t0.05384\t0.08148\t0.09107\t0.02244\t0.01911\t0.00754\t0.00681\t0.00181\t0.00656\t0.00668\t0.00513\t0.31237\n+5\t0.01230\t0.00969\t0.01292\t0.01429\t0.09221\t0.00895\t0.00912\t0.03841\t0.01713\t0.02396\t0.20509\t0.26209\t0.06490\t0.06848\t0.01043\t0.00272\t0.00514\t0.01340\t0.00633\t0.12244\n+6\t0.02163\t0.01665\t0.02456\t0.09309\t0.29432\t0.01729\t0.04275\t0.15289\t0.07641\t0.12346\t0.04840\t0.02186\t0.01619\t0.00816\t0.00752\t0.00229\t0.00810\t0.00728\t0.00568\t0.01145\n+7\t0.01856\t0.01424\t0.02237\t0.23613\t0.25939\t0.01474\t0.01746\t0.02318\t0.04178\t0.13159\t0.01875\t0.07268\t0.01537\t0.00854\t0.00740\t0.00228\t0.00802\t0.00770\t0.00490\t0.07495\n+8\t0.01539\t0.01333\t0.01948\t0.30427\t0.12506\t0.03860\t0.01628\t0.01948\t0.01654\t0.04745\t0.06839\t0.03350\t0.02110\t0.01014\t0.00777\t0.00241\t0.00816\t0.12463\t0.00474\t0.10329\n+9\t0.01447\t0.01282\t0.01699\t0.01780\t0.15060\t0.01163\t0.01138\t0.01746\t0.01567\t0.02275\t0.05457\t0.02925\t0.13451\t0.04196\t0.00962\t0.00208\t0.06623\t0.00770\t0.00477\t0.35777\n+10\t0.01212\t0.00963\t0.01410\t0.13971\t0.09856\t0.01043\t0.01073\t0.01428\t0.01311\t0.01789\t0.05051\t0.07431\t0.02362\t0.31380\t0.16016\t0.00626\t0.01008\t0.00968\t0.00438\t0.00665\n+11\t0.01831\t0.01781\t0.03114\t0.04452\t0.64469\t0.01772\t0.07008\t0.02286\t0.01695\t0.02422\t0.01404\t0.01850\t0.01172\t0.00659\t0.00745\t0.00223\t0.00909\t0.00677\t0.00368\t0.01163\n+12\t0.01421\t0.01329\t0.02232\t0.59546\t0.12444\t0.01595\t0.01999\t0.01886\t0.01505\t0.01959\t0.01507\t0.06571\t0.01265\t0.00835\t0.00755\t0.00248\t0.00941\t0.00754\t0.00357\t0.00852\n+13\t0.07275\t0.01527\t0.01921\t0.01667\t0.01777\t0.04971\t0.01359\t0.01779\t0.01219\t0.01916\t0.01206\t0.01909\t0.01170\t0.05716\t0.10373\t0.00424\t0.46994\t0.00652\t0.00360\t0.05784\n+14\t0.73478\t0.06800\t0.01297\t0.00998\t0.01470\t0.01759\t0.00838\t0.02185\t0.01281\t0.03214\t0.01034\t0.01205\t0.00815\t0.00685\t0.00461\t0.00224\t0.00590\t0.00402\t0.00449\t0.00815\n+15\t0.01445\t0.06692\t0.02349\t0.66914\t0.04877\t0.01744\t0.02003\t0.01921\t0.01486\t0.01886\t0.01298\t0.01921\t0.00987\t0.00734\t0.00723\t0.00241\t0.00975\t0.00640\t0.00329\t0.00834\n+16\t0.06660\t0.00704\t0.00878\t0.01029\t0.01103\t0.00681\t0.00698\t0.01118\t0.01410\t0.02001\t0.03867\t0.68114\t0.04608\t0.02205\t0.00912\t0.00296\t0.00441\t0.01985\t0.00672\t0.00618\n+17\t0.01109\t0.00806\t0.01174\t0.06315\t0.01471\t0.00916\t0.00892\t0.01289\t0.01173\t0.01643\t0.01951\t0.03180\t0.01913\t0.18617\t0.46695\t0.07476\t0.01549\t0.00830\t0.00397\t0.00604\n+18\t0.03331\t0.01263\t0.01723\t0.01321\t0.01895\t0.01091\t0.01091\t0.03618\t0.02125\t0.69794\t0.02929\t0.02527\t0.01838\t0.00919\t0.00747\t0.00230\t0.00632\t0.00747\t0.00919\t0.01263\n+19\t0.01838\t0.01751\t0.02915\t0.04333\t0.64325\t0.01770\t0.02197\t0.02401\t0.06563\t0.02475\t0.01516\t0.01906\t0.01256\t0.00687\t0.00736\t0.00223\t0.00860\t0.00675\t0.00396\t0.01176\n+20\t0.06299\t0.01270\t0.01698\t0.01307\t0.01877\t0.01114\t0.01080\t0.03562\t0.02091\t0.67192\t0.02855\t0.02475\t0.01797\t0.00910\t0.00735\t0.00230\t0.00629\t0.00733\t0.00901\t0.01245\n+21\t0.01038\t0.00803\t0.00952\t0.00906\t0.01120\t0.00740\t0.00682\t0.01432\t0.05615\t0.02665\t0.45112\t0.05916\t0.27068\t0.01608\t0.00870\t0.00240\t0.00372\t0.01388\t0.00772\t0.00703\n+22\t0.01080\t0.00720\t0.00810\t0.00810\t0.00810\t0.00720\t0.00450\t0.01080'..b'230\t0.00632\t0.00747\t0.00919\t0.01263\n+100\t0.01682\t0.01605\t0.02733\t0.28669\t0.46382\t0.01723\t0.02201\t0.02142\t0.01617\t0.02237\t0.01369\t0.01888\t0.01109\t0.00690\t0.00738\t0.00230\t0.00920\t0.00661\t0.00354\t0.01051\n+101\t0.01080\t0.00720\t0.00810\t0.00810\t0.00810\t0.00720\t0.00450\t0.01080\t0.01080\t0.01439\t0.02339\t0.04858\t0.02699\t0.73910\t0.03779\t0.00720\t0.00720\t0.01080\t0.00450\t0.00450\n+102\t0.01941\t0.01992\t0.02704\t0.11491\t0.47552\t0.12953\t0.02056\t0.02439\t0.05405\t0.02306\t0.01438\t0.01824\t0.01180\t0.00706\t0.00726\t0.00220\t0.00952\t0.00641\t0.00387\t0.01086\n+103\t0.01869\t0.01584\t0.02122\t0.36437\t0.05431\t0.01860\t0.01701\t0.18499\t0.17381\t0.02882\t0.01831\t0.02110\t0.01358\t0.00838\t0.00745\t0.00242\t0.00851\t0.00704\t0.00532\t0.01024\n+104\t0.02773\t0.03538\t0.02104\t0.01913\t0.02295\t0.70930\t0.01434\t0.02964\t0.02104\t0.01817\t0.01148\t0.01339\t0.00956\t0.00765\t0.00669\t0.00191\t0.01339\t0.00478\t0.00383\t0.00861\n+105\t0.00904\t0.00646\t0.00861\t0.01034\t0.01077\t0.00603\t0.00689\t0.01034\t0.01421\t0.01895\t0.04092\t0.73426\t0.04910\t0.02326\t0.00948\t0.00301\t0.00431\t0.02110\t0.00689\t0.00603\n+106\t0.01539\t0.01319\t0.01539\t0.01100\t0.01759\t0.00990\t0.00880\t0.01869\t0.01539\t0.02419\t0.01319\t0.01539\t0.01100\t0.00550\t0.00550\t0.00110\t0.00550\t0.00440\t0.00440\t0.78449\n+107\t0.30239\t0.01330\t0.01482\t0.01179\t0.01720\t0.01288\t0.00971\t0.02959\t0.01768\t0.40440\t0.02118\t0.01973\t0.01407\t0.00806\t0.00628\t0.00220\t0.00604\t0.00598\t0.00715\t0.07557\n+108\t0.01799\t0.07782\t0.02506\t0.02720\t0.26585\t0.04541\t0.01702\t0.02472\t0.15040\t0.02330\t0.04021\t0.02031\t0.01527\t0.00939\t0.01185\t0.00250\t0.20403\t0.00690\t0.00447\t0.01029\n+109\t0.03331\t0.01263\t0.01723\t0.01321\t0.01895\t0.01091\t0.01091\t0.03618\t0.02125\t0.69794\t0.02929\t0.02527\t0.01838\t0.00919\t0.00747\t0.00230\t0.00632\t0.00747\t0.00919\t0.01263\n+110\t0.01165\t0.00844\t0.01153\t0.01307\t0.01486\t0.00832\t0.01134\t0.01492\t0.01707\t0.02200\t0.04282\t0.08254\t0.10608\t0.02034\t0.01011\t0.00333\t0.00653\t0.58142\t0.00684\t0.00678\n+111\t0.79154\t0.01436\t0.01091\t0.00976\t0.01436\t0.01665\t0.00804\t0.02182\t0.01263\t0.03331\t0.01034\t0.01206\t0.00804\t0.00689\t0.00459\t0.00230\t0.00574\t0.00402\t0.00459\t0.00804\n+112\t0.01606\t0.01601\t0.02489\t0.17159\t0.08937\t0.02065\t0.06621\t0.01899\t0.01307\t0.01913\t0.01126\t0.01747\t0.01007\t0.01072\t0.01805\t0.00293\t0.45487\t0.00670\t0.00334\t0.00862\n+113\t0.05710\t0.01326\t0.02164\t0.68184\t0.04909\t0.01650\t0.01992\t0.01913\t0.01472\t0.01976\t0.01304\t0.01936\t0.00979\t0.00739\t0.00727\t0.00246\t0.00967\t0.00645\t0.00337\t0.00824\n+114\t0.00904\t0.00753\t0.00789\t0.00780\t0.01019\t0.00638\t0.00585\t0.01117\t0.01755\t0.02154\t0.16915\t0.06900\t0.59490\t0.01825\t0.00877\t0.00248\t0.00372\t0.01532\t0.00709\t0.00638\n+115\t0.01402\t0.01319\t0.02227\t0.72126\t0.05113\t0.01649\t0.02062\t0.01897\t0.01484\t0.01897\t0.01319\t0.01979\t0.00990\t0.00742\t0.00742\t0.00247\t0.00990\t0.00660\t0.00330\t0.00825\n+116\t0.00877\t0.00752\t0.00752\t0.00752\t0.01003\t0.00627\t0.00564\t0.01065\t0.01692\t0.02005\t0.07520\t0.07144\t0.68978\t0.01880\t0.00877\t0.00251\t0.00376\t0.01567\t0.00689\t0.00627\n+117\t0.01168\t0.00835\t0.01160\t0.01307\t0.01472\t0.00827\t0.01121\t0.01501\t0.01738\t0.02287\t0.10804\t0.10971\t0.04590\t0.02007\t0.01006\t0.00329\t0.00637\t0.54862\t0.00698\t0.00682\n+118\t0.01117\t0.00805\t0.01017\t0.01116\t0.01222\t0.00791\t0.00782\t0.08003\t0.01650\t0.02200\t0.03842\t0.63682\t0.04503\t0.02165\t0.00928\t0.00295\t0.00480\t0.04033\t0.00695\t0.00675\n+119\t0.01140\t0.00875\t0.01326\t0.04537\t0.05845\t0.00999\t0.01036\t0.01423\t0.01250\t0.01812\t0.01948\t0.02850\t0.01798\t0.06649\t0.58633\t0.01034\t0.01771\t0.00784\t0.03592\t0.00699\n+120\t0.01639\t0.01401\t0.01680\t0.01328\t0.04808\t0.01162\t0.01007\t0.06073\t0.01655\t0.02539\t0.01339\t0.01572\t0.01108\t0.00608\t0.00648\t0.00131\t0.03548\t0.00473\t0.00451\t0.66831\n+121\t0.02619\t0.01918\t0.02062\t0.01620\t0.02161\t0.02118\t0.01334\t0.57119\t0.06161\t0.04384\t0.01967\t0.02161\t0.01472\t0.00942\t0.00740\t0.00226\t0.00771\t0.03298\t0.05726\t0.01198\n+122\t0.01630\t0.01502\t0.02225\t0.56278\t0.07076\t0.04263\t0.01927\t0.09026\t0.01736\t0.02239\t0.01367\t0.01910\t0.01030\t0.00748\t0.00731\t0.00236\t0.00961\t0.00645\t0.00383\t0.04085\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t21\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W0IVU.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/funannotate_db/insecta/prfl/EOG090W0MBV.prfl
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W0MBV.prfl Thu Apr 13 17:16:35 2023 +0000

[

b'@@ -0,0 +1,181 @@\n+[name]\n+unknown\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t7\n+\n+[block]\n+# block no. 0 follows, 35 sequences, length 10\n+# corresponding to MSA columns:\n+# 7-16\n+name=unknown_A\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.02359\t0.19577\t0.01918\t0.01164\t0.01632\t0.03856\t0.01007\t0.07779\t0.01745\t0.42598\t0.02068\t0.02254\t0.01514\t0.00808\t0.00602\t0.00189\t0.00609\t0.06745\t0.00618\t0.00960\n+1\t0.01775\t0.66813\t0.07291\t0.01131\t0.01692\t0.02308\t0.01145\t0.02013\t0.01339\t0.08060\t0.01043\t0.01139\t0.00882\t0.00568\t0.00439\t0.00145\t0.00681\t0.00374\t0.00317\t0.00845\n+2\t0.14091\t0.35037\t0.26236\t0.01289\t0.01934\t0.01867\t0.01426\t0.02031\t0.01318\t0.08020\t0.01104\t0.01222\t0.00855\t0.00590\t0.00489\t0.00172\t0.00723\t0.00408\t0.00332\t0.00858\n+3\t0.01482\t0.36147\t0.37657\t0.01646\t0.07589\t0.01933\t0.01759\t0.01956\t0.01325\t0.01786\t0.01029\t0.01215\t0.00823\t0.00573\t0.00518\t0.00171\t0.00809\t0.00419\t0.00273\t0.00888\n+4\t0.07353\t0.00686\t0.00825\t0.00817\t0.00888\t0.00741\t0.00551\t0.01070\t0.00969\t0.01443\t0.01806\t0.03327\t0.01927\t0.46201\t0.28058\t0.00723\t0.00983\t0.00792\t0.00370\t0.00472\n+5\t0.01615\t0.63838\t0.16866\t0.01223\t0.01841\t0.02313\t0.01325\t0.01920\t0.01299\t0.01591\t0.00931\t0.01079\t0.00812\t0.00554\t0.00444\t0.00148\t0.00728\t0.00364\t0.00271\t0.00838\n+6\t0.28659\t0.04777\t0.04361\t0.01184\t0.01587\t0.18001\t0.00983\t0.02236\t0.06765\t0.11491\t0.03453\t0.01465\t0.01120\t0.00685\t0.00592\t0.00184\t0.04358\t0.00466\t0.00440\t0.07192\n+7\t0.01686\t0.60647\t0.14042\t0.01240\t0.01825\t0.08191\t0.01289\t0.01967\t0.01338\t0.01576\t0.00929\t0.01077\t0.00813\t0.00561\t0.00450\t0.00148\t0.00755\t0.00365\t0.00275\t0.00827\n+8\t0.01596\t0.60458\t0.20079\t0.01256\t0.01892\t0.02266\t0.01382\t0.01925\t0.01301\t0.01614\t0.00942\t0.01093\t0.00812\t0.00557\t0.00453\t0.00151\t0.00739\t0.00370\t0.00271\t0.00843\n+9\t0.08097\t0.00754\t0.00928\t0.00848\t0.01061\t0.00706\t0.00645\t0.01429\t0.01660\t0.09376\t0.50524\t0.10529\t0.04697\t0.01208\t0.00699\t0.00199\t0.00353\t0.01050\t0.00655\t0.04580\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t3\n+\n+[block]\n+# block no. 1 follows, 35 sequences, length 6\n+# corresponding to MSA columns:\n+# 20-25\n+name=unknown_B\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.08074\t0.57984\t0.10591\t0.01146\t0.01715\t0.02190\t0.01177\t0.02002\t0.01319\t0.07374\t0.01037\t0.01143\t0.00862\t0.00572\t0.00445\t0.00152\t0.00680\t0.00377\t0.00321\t0.00838\n+1\t0.01490\t0.53226\t0.12754\t0.01173\t0.01691\t0.02045\t0.01205\t0.01771\t0.01246\t0.01560\t0.01070\t0.01338\t0.00957\t0.01340\t0.14428\t0.00310\t0.00905\t0.00421\t0.00284\t0.00785\n+2\t0.01062\t0.15131\t0.01283\t0.00864\t0.01000\t0.01023\t0.00639\t0.01169\t0.01020\t0.01352\t0.01700\t0.03065\t0.01810\t0.41286\t0.24385\t0.00647\t0.00954\t0.00740\t0.00350\t0.00520\n+3\t0.01793\t0.67280\t0.03105\t0.01164\t0.01676\t0.12969\t0.01106\t0.01991\t0.01362\t0.01501\t0.00896\t0.01036\t0.00815\t0.00559\t0.00431\t0.00140\t0.00745\t0.00349\t0.00279\t0.00803\n+4\t0.01482\t0.57086\t0.09009\t0.01066\t0.01581\t0.02050\t0.01082\t0.01724\t0.01323\t0.01579\t0.01942\t0.01998\t0.14412\t0.00747\t0.00488\t0.00156\t0.00634\t0.00538\t0.00331\t0.00773\n+5\t0.01332\t0.12525\t0.09355\t0.00978\t0.01335\t0.01020\t0.00895\t0.01635\t0.01618\t0.13131\t0.33326\t0.03633\t0.14596\t0.01079\t0.00665\t0.00192\t0.00466\t0.00905\t0.00584\t0.00731\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+9\t12\n+\n+[block]\n+# block no. 2 follows, 35 sequences, length 13\n+# corresponding to MSA columns:\n+# 42-54\n+name=unknown_C\n+#\n+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>\n+#\tG\tD\tE\tR\tK\tN\tQ\tS\tT\tA\tV\tL\tI\tF\tY\tW\tH\tM\tC\tP\n+0\t0.01426\t0.01482\t0.02773\t0.01992\t0.02579\t0.01338\t0.42471\t0.01851\t0.01409\t0.02024\t0.01207\t0.01552\t0.00949\t0.00534\t0.00700\t0.00172\t0.03930\t0.00603\t0.00339\t0.30669\n+1\t0.01272\t0.03281\t0.74418\t0.01808\t0.02746\t0.01473\t0.02344\t0.02009\t0.01339\t0.02009\t0.01138\t0.01339\t0.00804\t0.00603\t0.00603\t0.00201\t0.00938\t0.00469\t0.00268\t0.00938\n+2\t0.01380\t0.25406\t0.49537\t0.01553\t0.02331\t0.01747\t0.01891\t0.01932\t0.01308\t0.01828\t0.01091\t0.01302\t0.00846\t0.00796\t0.04333\t0.00223\t0.00899\t0.00441\t0.00273\t0.00882\n+3\t0.01471\t0.38281\t0.41155\t0.01470\t0.02223\t0.01958\t0.01755\t0.'..b'490\t0.01607\t0.00750\t0.00214\t0.00321\t0.01339\t0.00589\t0.00536\n+63\t0.00763\t0.00643\t0.00661\t0.00657\t0.00865\t0.00541\t0.00492\t0.00936\t0.01477\t0.01788\t0.12422\t0.05983\t0.67449\t0.01579\t0.00750\t0.00213\t0.00319\t0.01322\t0.00599\t0.00541\n+64\t0.00750\t0.00643\t0.00643\t0.00643\t0.00857\t0.00536\t0.00482\t0.00910\t0.01446\t0.01714\t0.06427\t0.06105\t0.73490\t0.01607\t0.00750\t0.00214\t0.00321\t0.01339\t0.00589\t0.00536\n+65\t0.01198\t0.01128\t0.01903\t0.76180\t0.04369\t0.01409\t0.01762\t0.01621\t0.01268\t0.01621\t0.01128\t0.01691\t0.00846\t0.00634\t0.00634\t0.00211\t0.00846\t0.00564\t0.00282\t0.00705\n+66\t0.01198\t0.01128\t0.01903\t0.76180\t0.04369\t0.01409\t0.01762\t0.01621\t0.01268\t0.01621\t0.01128\t0.01691\t0.00846\t0.00634\t0.00634\t0.00211\t0.00846\t0.00564\t0.00282\t0.00705\n+67\t0.00910\t0.00667\t0.00954\t0.00954\t0.01044\t0.00757\t0.00711\t0.01091\t0.01000\t0.01424\t0.01759\t0.02825\t0.01731\t0.19410\t0.60736\t0.00938\t0.01481\t0.00728\t0.00349\t0.00530\n+68\t0.00773\t0.00552\t0.00736\t0.00883\t0.00920\t0.00515\t0.00589\t0.00883\t0.01215\t0.01619\t0.03497\t0.77291\t0.04196\t0.01987\t0.00810\t0.00258\t0.00368\t0.01803\t0.00589\t0.00515\n+69\t0.01315\t0.01128\t0.01315\t0.00940\t0.01503\t0.00846\t0.00752\t0.01597\t0.01315\t0.02067\t0.01128\t0.01315\t0.00940\t0.00470\t0.00470\t0.00094\t0.00470\t0.00376\t0.00376\t0.81583\n+70\t0.01696\t0.78087\t0.03324\t0.01085\t0.01628\t0.02510\t0.01085\t0.01900\t0.01289\t0.01493\t0.00882\t0.01018\t0.00814\t0.00543\t0.00407\t0.00136\t0.00678\t0.00339\t0.00271\t0.00814\n+71\t0.08422\t0.01896\t0.01854\t0.01592\t0.01783\t0.24248\t0.03317\t0.05512\t0.01374\t0.03718\t0.00975\t0.01321\t0.00852\t0.00884\t0.01330\t0.00228\t0.39117\t0.00502\t0.00335\t0.00741\n+72\t0.02412\t0.01777\t0.01904\t0.01460\t0.01967\t0.01967\t0.01206\t0.71633\t0.02983\t0.03998\t0.01523\t0.01523\t0.01079\t0.00762\t0.00635\t0.00190\t0.00698\t0.00571\t0.00635\t0.01079\n+73\t0.00908\t0.00671\t0.00975\t0.00975\t0.01073\t0.00769\t0.00738\t0.01104\t0.01006\t0.01440\t0.01740\t0.02717\t0.01683\t0.14621\t0.65462\t0.00965\t0.01553\t0.00713\t0.00346\t0.00542\n+74\t0.01272\t0.03281\t0.74418\t0.01808\t0.02746\t0.01473\t0.02344\t0.02009\t0.01339\t0.02009\t0.01138\t0.01339\t0.00804\t0.00603\t0.00603\t0.00201\t0.00938\t0.00469\t0.00268\t0.00938\n+75\t0.01696\t0.78087\t0.03324\t0.01085\t0.01628\t0.02510\t0.01085\t0.01900\t0.01289\t0.01493\t0.00882\t0.01018\t0.00814\t0.00543\t0.00407\t0.00136\t0.00678\t0.00339\t0.00271\t0.00814\n+76\t0.01102\t0.00551\t0.00826\t0.00826\t0.00826\t0.00551\t0.00551\t0.00826\t0.00826\t0.01102\t0.01102\t0.01928\t0.01102\t0.02204\t0.02479\t0.81543\t0.00551\t0.00551\t0.00275\t0.00275\n+77\t0.45751\t0.01405\t0.01304\t0.01071\t0.01499\t0.01580\t0.00882\t0.28592\t0.01840\t0.05279\t0.01227\t0.01311\t0.00904\t0.00667\t0.00494\t0.00192\t0.00563\t0.00450\t0.04144\t0.00844\n+78\t0.00750\t0.00643\t0.00643\t0.00643\t0.00857\t0.00536\t0.00482\t0.00910\t0.01446\t0.01714\t0.06427\t0.06105\t0.73490\t0.01607\t0.00750\t0.00214\t0.00321\t0.01339\t0.00589\t0.00536\n+79\t0.01726\t0.74700\t0.03255\t0.01110\t0.01643\t0.05788\t0.01092\t0.01928\t0.01312\t0.01495\t0.00886\t0.01023\t0.00814\t0.00548\t0.00414\t0.00137\t0.00699\t0.00342\t0.00274\t0.00811\n+80\t0.01272\t0.03281\t0.74418\t0.01808\t0.02746\t0.01473\t0.02344\t0.02009\t0.01339\t0.02009\t0.01138\t0.01339\t0.00804\t0.00603\t0.00603\t0.00201\t0.00938\t0.00469\t0.00268\t0.00938\n+81\t0.00773\t0.00552\t0.00736\t0.00883\t0.00920\t0.00515\t0.00589\t0.00883\t0.01215\t0.01619\t0.03497\t0.77291\t0.04196\t0.01987\t0.00810\t0.00258\t0.00368\t0.01803\t0.00589\t0.00515\n+82\t0.00789\t0.00677\t0.00681\t0.00674\t0.00895\t0.00586\t0.00507\t0.01028\t0.04858\t0.01759\t0.06242\t0.05926\t0.70059\t0.01571\t0.00745\t0.00214\t0.00330\t0.01309\t0.00592\t0.00558\n+83\t0.00773\t0.00650\t0.00675\t0.00688\t0.00896\t0.00552\t0.00528\t0.00945\t0.01447\t0.01730\t0.06164\t0.06195\t0.67504\t0.01619\t0.00761\t0.00221\t0.00344\t0.07179\t0.00589\t0.00540\n+84\t0.01003\t0.00825\t0.00877\t0.00820\t0.01064\t0.00797\t0.00627\t0.05412\t0.13111\t0.02133\t0.16491\t0.05013\t0.46700\t0.01387\t0.00726\t0.00211\t0.00369\t0.01163\t0.00619\t0.00653\n+85\t0.01696\t0.78087\t0.03324\t0.01085\t0.01628\t0.02510\t0.01085\t0.01900\t0.01289\t0.01493\t0.00882\t0.01018\t0.00814\t0.00543\t0.00407\t0.00136\t0.00678\t0.00339\t0.00271\t0.00814\n+\n+[dist]\n+# distance from previous block\n+# <min> <max>\n+0\t1\n+\n+# created by:\n+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W0MBV.fa\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/genome_masked.fa
--- a/test-data/genome_masked.fa Sun Jan 22 17:30:57 2023 +0000
+++ b/test-data/genome_masked.fa Thu Apr 13 17:16:35 2023 +0000

b'@@ -4313,7 +4313,10104 @@\n CATGTCAAGTATTATTATCGAGCAACTACAAACGAAATACAAACATACAT\n TTAATTGCCAAGAATGTTCCTAGCCAAACAAATGTCGAAATAATGTCGGG\n CCACGGCCAAAGATTTATCATATTCACTCGACTGTCATAAAAAGCAATTA\n-GGCCCGGGCGAAAGATACACGACCGGCAGTCCCGAAATGT\n+GGCCCGGGCGAAAGATACACGACCGGCAGTCCCGAAATGTAATAAAAAaa\n+taacaaaatACACCGAAGGGGCGCAGCGAAAGAAGAAAGAAACGATGTGT\n+GATTTGAAGTTGTTTCTGGTTTTCGGTTTCGCTTAATGAGTTTGCCGCAC\n+AAAAAGTCGCTTCGAGGGAAGCGATTAAAGATTCCACATCCAGTGCGGCA\n+CGTCGGGGTTGTTGCTTCTGTAGCGGATGGTCCTGCACCCGAAAAAATAA\n+TTTCACTCGAGGCTATCAGAAAATGGTGTAGCGGTGTGGTCCAGATATGC\n+CTCCAGATATTGAGTACGCCGTGTCAGTGAATTTGAATTCAAAAAATGTT\n+TGAAAACTTTAATTGTTTTCCTCTCTCCTGATGATAACTACTTTGAACGA\n+CGGAAAAACGTACTATAAACAAAGTATAATTAAATCTTTTCCATTTGTTA\n+TAGAGTACTCTTTACTTAAATAGTTTGAATTTGGCCTAAAAGTTATCAGT\n+GATAACTGAGCGTTATTCATCACGTTATTCTTTGGTCGACTTCTTAGATT\n+TTTTGGATGGAGTCTAAGTCTGCCTAATTTCAGATTTCAGATAATTTAAT\n+TTAAATGAGTGGGACAATTTCTTTAAGTGCAGCGTGTCTCTTGTAATTAG\n+TATGCCTGCACACTCGCCGTGCCctgtgccctgtgccctTCGAAATAAAA\n+GCGGAAGCGGAGGTCCCCGCGAACAGTTGGCCCTTTGGGACAGAGAAAGG\n+CAGGTTCGGTTTGAAGGGCACTCGTCAGCAGAAACGAAAGGTGGGGAGGG\n+GCGGCGATACTATCCACGTTCCGATCCGAAAACAAGCGACCTGCCGATTC\n+GGATTGGTGTGAAAAGTCCGCCCCATGGCAACTGGCCTTGTTTTTTCCGT\n+CTGTTGCATATTTTCACAAGTAATTAACATGTGCCCGACGTTGTCCTTGT\n+CCGTAGCCAGGGATCCGGGAAGCCAGCCTGTTCCCGCGCAACTGTCCAAA\n+CAGGCTGCCCCGTTGTTGTTCGTCAGCGGGGTAACAAAGCGCTGCCTCCG\n+CATTAATTTGCATTATTTTCACATTTAACTTTCAAGCGAGTGCGCCTGCC\n+GAAGTTGCACTCTGCCGGCGAGCGGACAGGTGGAGCAGGTGGAACTGAAG\n+TGCCACTTCTAATTGTGCGGTGATTGGGGCACGGCTTTGAAAGATTCCGT\n+TCGAATGGCTTCCATCGGCAAACACCAACTATCGTCCCTGCCTTGATTGA\n+GTTAATAAGGGTTTAGGAATAATTTGATTGGCGTTAATAAAATATTGgta\n+aaacatcggtaaaacgTTATGTTGTATGCAAGTTTCACAATGAAGCTACA\n+ATAATATGATAATTTGCTTTAGCGAAGATTAGTACCAATAATTTGATTta\n+ATTTGAGTCGAAACTTTAAATATCAATTAATTCATTAACCGGGAGGGTAT\n+GATTAAAATATGCACCCTGTTGCTAAAATTAAATTTATGGTTTCTGTTGC\n+AAAGAATTTTACAGTGATGACAGAATGACGAGAGACACATTTCTGATCAA\n+CCTCTCCACCTCAGAAAAGATCTCAAATTTTAAGCAGCAGTTGCATCCAC\n+TTACTTTAAAACGACAACTTATAATTTGATCAGTGCTCTCAACATATATC\n+CAATTTATTAGATTTCCATGGCACCAATTCGATTTTTACTTTTAAATGGA\n+AAATCAAAAAGGGGAGAGAATCCCGGAAAGAGGAGCACTGATTTCTAGAA\n+TATTTATTTAGGAACATTTTAATATTGAATTCTTCAAGCCGGAGGAACAT\n+GCCACTTACAGTTCAATAGTTTTTACTTAGAAATTACATATCATTGCTAT\n+CATTACTTTTCGATCGCTATTCAGTGTTTATTTTATGGCTTTCGATCCCC\n+AAACTGTGTTAGGCTTAAGTTTAAATAATATTCCTTCGATTCTAGAACGC\n+TGTGCCCTGTTTCATAAACTTACATAGTTCATGGGCGGAAAACTTactta\n+ctgactgGCGATGATGCTGCCCCATTGCCCCATTTGGGCCATTTAGTTCG\n+CCGTTGATGATAAATTCTGCACTATGGCCCCGGGCGAATGTGCAATAAAA\n+TGCTCCCCGCGCTCCGCACAGCAACAAACCTTGCAACATAAATTAAGGCG\n+CAAAATGTTTATTTACGCTGCGGGAGGGAGTCGGAGGGAAGTCGGGAGAA\n+AGGGGCAAACACGCCGGCTGTTTCCTGCGCAACATTTGCATTTTGACGCC\n+GCATTACGCGTGATGTGAGGAGCCCCGGCCACTCGGCTTATCAGCCCAGA\n+GAAATCAAACGGCGCAGAAGTCGGCGGAGATTGTGGAGTTGCACGTCCAC\n+TGCCCGCAGCATCTTGCAACATTTTGTTTTAATTTCGCACTCTTGAAAAG\n+TGGCAGCCGCCACTCGGACGGTTTTTGAATTGGCCAAGTGAATTGCCACG\n+GACCACAGCGGCAGGGAATGTAGTAGAGTCCAAGACAGGGAATGGAGCCA\n+GCTGCTGGTCGATCTCACCTAGGGAATGGAGTCCATCGCTTTCCTTTCCC\n+CTTTGCAATGCTGCAATACCTTAAGATATTTCCTATACTTCGGCTTTAAT\n+ttggaaaaaaaaGTAACACTTACTAAGGTAAAATGAAATCTCGTATCTCT\n+GCTTAAGTAAAATTAGAATCAGTAGGGAACATTCCAAGTGCTTTGGAATA\n+TTAAACTTCATATCATACCAAGAATGATATTTCTCTGCCCTGAATTTATC\n+ACTCATTGTCGGTTCATTCAAGTGATTCCTTTTTTAAATATGATTATTGA\n+TTATCAATTTCTTTCATGTTGAGTCCCATTCCCCTTGCAACAGAAAACTT\n+CACACTCGGCTGTTTTTTCAGGCATTTTTAAAATCAAGGGGCCCACATCA\n+AAGGGCATTGCCTAAGAAACGAAGCCAATTGTATCTGCGTCCCAGTGCGT\n+GTATACACGTATCTGcatctgtatctgtaGTATATCAGtataTCAATGGC\n+CGTATCTGAAGGTGCGAGTTTTGATTGCGTTCGCTCTGTCAGGCAGAGGG\n+ACAGAAGGGCGCTTTATTTGATTTCAAGTTATGTTGTTTTTAGTGAGTTC\n+CTCTGGCACTCCCCTCCAGGTTTTTTGGCTTTTGTTTGTTGAACTTTGGC\n+TGACTAATAGCTGGTGAAGGGGGACCTCCAGGGGAGTGGGGCAGTTATGA\n+CGATGCCATAGTTTTTCGAACACATCCGAACATGTGTATTTATTACCGCC\n+TGATGCGGGCTGTTTGTTCCCAGCGCCCTGCACCGTGATTTGATTTATTT\n+GTACACAGTTTTATGATATTTACATGTCTGCAACTGAGGGTCCATGGTGT\n+GGCAAGGAGGGGTTGGTGGCCAGCGGTGCGGCAGGAGCAGCAAATGCAAT\n+CTACACCAGTGATTCAATTCTAGGTTCATCGAGTTCGCCTTGCACTTCTT\n+CGTTTTGTTCAAGGGTTATACAATAGTAGGTTAAGTTATTATATAAAAAT\n+ATGTTATGCGGCTCATAGTACGCCAGTACATAGAAAGCGCTGAGTTTAAA\n+ATTTGATTGCCGCTCCGGATTAATTTGTATTTTATTCGATCATAGTAAAT\n+GACGTTTTCAAATTAAAGTATAAATTGTGT'..b'CGCT\n+CAAATGGAACCCAAACCCTTTGACCTtcgacctTTGTATACTTTGGATTC\n+GGAAACGCATTCTTGTGCCTGTTACGTGTTGTTCTAAAGACTTACCTCTT\n+CTCTTCCTGCTCCTCGTCTTTTCCGTGGCACATTGCGAACACCCTTAGCT\n+TGGAGTTCTGCCAGTGGGAGCGCATGGAGATTATGTAGGGCAGGAGAATT\n+GTGAGACCTACATGTATTCCCAATGACTTGTGGATTAGTTGCAAAGTGGC\n+TGATTACGACCAAGTACCCACCTCCGTCGTCGTACAGCCAGAAGACATCG\n+ATTGTGCCCTTGGGCTGTTTGCGCGTGAATATGGTCATGGCGTCCAGCAA\n+GTTTTGGGGTATGTCCGATCCGCCCTTGGTGTGGTAGGTGACGGCGGGCT\n+CATCCGAGCTGGTCACCTTGTAGCTGCGGGAGTTGCGCTGCATGTTGGGC\n+ATCGGTGCTGGCTGGGGCATTGTGAAAGAGGAGTTGGGGCTGTCCATGCT\n+GGCTAGGTTCAGGTTGGAGTCAATGTGCAGCAGCTCCGAGGCTGCATTGG\n+CCGCCGGCATCAGTTCGTTGGTGAATCCATGCGCATTGGCGGTATGCATG\n+TGACCCATTCCGTTGGCCGGCAGAGTGACCTCGGAACTCAGCTCAGAGAA\n+ATCCAATCCGTTGGGCAGTCGGAGCAGGGCCACGCCCATACGCTGAGAAA\n+AAGCATTGCTATGGAAGAGGTGGACTTGGTAAGGCATCCAATAACATAGT\n+TTGGGGAAATAACTTACTACAAAATGGAAAAGTAACTCTCCACCTCCTCC\n+TTGCGACAGCGATTCCAGTCCGGCTTGTAGCCCACCAGCACAATGTTCGG\n+AGACATTTTGCCGAAGCCCGTTGACTTTGTCAACGCATTTATTCCGTCCT\n+CCAGGCTGAACCCATCAATCACATTGTAGAAGGCCTTGATCTTGCGGGCA\n+TCCAGGTACTTTTGTCCATCCTTCACCAGGTGCTGCCGGTTCTTGTAGCC\n+CACCCGCACCTGAAAGGATATAACAAGTATTTTAGTAAGAATCACCATTC\n+CGCTTTTCTTGATGTCCAACAAAATGGGTGAGTTTTCCCTTATCAAGAAA\n+TCCATTCACGTACCGGTATTATATTTGCCACGAACATGAGGGAGTTGTTC\n+TTGGTCAGCAGGTAGCCAAAGTCCACGAGTGGCGGTCTGGTCTTGGGATC\n+GCCGGAGAGCACCAGCACCTGGGGATGGTAGTTCTTGACGTGATCCGAGA\n+CGTTCTGCAGTCGGTGGACGGCCATTAGAGCAGCCTTGTACTGCTGAGCC\n+TGCGTGGTGGATCCCCAGTTGGCCTCCGGCTTGCGGTACATGACCACCAG\n+ATAGAGGGCGAAGATGATGCCAAAGGTGATGATGGCGGCCACGTAGTTGA\n+TCAGGAACATGATGGCCACGCACATGGCGAACCCGAAGAGGCTGAGCCAG\n+GCGTTGTAGTACTTAAAGGTGGGTCGCCATCCCAATGGCTTCACGAAGGC\n+CGCGTGGAATGTGCAAAAGTTGATGAGGGCGTAGGAGGCCAGGTAGAAGG\n+TGGAGATCAGAGGAGCGATCAGGTTAAGCTCTCCGATCAGCAGGAAGCCG\n+GTggtgatgaagaagGTGAGCACGTAGCCGCGATACGGTTCGCCGTGCTT\n+GCCGTACGGCTTCGAGAAGAAGATTAGACCCGGGTAGATCTGGTCAATGC\n+CCAGGGCCTGCACCAGCCTGGGAACGGAAAGCAAGTTGGTCAGGGCCGTG\n+CTTAACGTGGCTGCAAAGCAGCCGGCGTAGATGAGTGGTCCCCACAGCGA\n+CATCTCCTGCATCATTTCGTACGAGTTGAAGAGACCCCAGGTGCAGTTGC\n+CCGTGGCCATGCACGGCAGCTCCGAGGAAACAATGGTGCCATTGACGAGG\n+TCAGCTGGTATACCGGAGGCATCTCTTACAGCAGCGCCACCGGCGAAGAG\n+GACAAAGAGAGCGTATGAGGACATCGAGATGAGCAGGGACCAGAAGGTGC\n+CCTTCGGTATAGCAGCTCCGGCATCCTTGAGGTCTCCGCAGATATTTGCT\n+CCTGCCTGGATGCCCGTCACGCTGGGAAAGAAGATAGCGAACACGCTGAA\n+AAAGTCGTGGTTTACGCCCTCCGCATAGCGATAGTCCGATCCGAAGTTCT\n+CCTTCAAAGTAGCCCCTAATTTAGGTAACCAGTTATGAGGTTATTACTTT\n+CTTAAGTTCTCTTATGAACTCACATGAAAAGCCGACGAAACCCCTAGAGA\n+TTTGCTCCTCATTACCCTGGGGTCCAATGGCAGCTCCGATCAGGAAATTG\n+AAGATGGCCAGGACAATCGTGACGATCAGGAAGTTCTGCGCCTTCGTCTC\n+CCACTCCATACCCACGCAGCAGATTAGGATGAGCACCAGCACGGTTATCG\n+ATCCCACGATCCGGATGTCATTGATCCCGTTGTCGACAATCTTCAGGTCG\n+TTGTTCTCTGGAAATGAGATTAATGATTACTCCGGAACTAAGTTAAGGAT\n+ATCCTCAAACTTAATTAAACCAGACTGGATCCATGAAATATAGTGAAAGT\n+CGTTTCTATTTCAACCTTTATTTTTTATCCTATTTATTTAGGACATTTAA\n+AGCTGCCCCATTTGTGGCCACCCTATTCAAGTTAATCGAATGGCCTCTGT\n+GTGCACAAGTCAATTGATACTCACTGAGTAAAACATTTAGCGATTCGCAG\n+AAGCCGATGGTGTTCATCGAGGCTGAgacggcgttggcgaaggcgaagac\n+cacgcccacCGACGCCCCAAACTCGGGGCCCAGCGAACGGGATATGAtga\n+agtagacgccgccgccCTTGACCTCGCCGTTGGTGCTAATGGCCGACAGC\n+GAGAGCGTCGTGATGACGCAGACCACCGCGGAGATCGTAATTATAATCAG\n+GGACTGCAGGATGCCCGACTCGGCCACCACCCAGCTGAGGCGCAGGAAGA\n+GCATTACGCCCCAGATGTTGAGAAGGCAAGGTATCAGCACGCCCACGATC\n+CATCCTAGCTTGATGTGTCCGCCAGTTGCCTCCGGTTCGGgttcgGGAAT\n+AGTGATGCTCTGCAATGGAGAAACGATCTTATGGATAATAAaaatatata\n+tgtatgtaGtatgtaGGTCGTCCTTATAAGTAATACCTTTCTTAAGTAAG\n+ACACATTAGTATTAACTTTTCACATAGGTTATGTTCAATCTAGCCGGCTA\n+ATGATTTGGGCAAACGGGAAAAGGCCGTCATCGGATTGTTATTTGCCTGA\n+TAATGGGATCTTGACATAAGTGGCATTCAATCGAATGTGTGCTAACTGTG\n+TGAGATTGAATTGAGTTCGGCTtttttttttAACTGTATACGACTCGAAC\n+AGCTGCTTGGGTGAGTTTTTATCCGGAATTACTCATACGACATGTGTGCA\n+ATTTAGTACTCGGATTCAATTAACGACCCGttaacgacccCCAAAATACG\n+AAAGCAGCAGCAAGCGAAGGCACAGCCACAACCAGATTATGAGCAGCAGC\n+TCACATTGCTTTCCATTCTAATTAAAGTTCACTTTTATTAGCCGCACTTA\n+AACTGGAAACATTATGAAAATGTTCACATAAAAGCTGAAACCCACCCAAT\n+GAGATGCCACCAAGTCAACTATTTAACGTATGCCCCAAAGTATTTCCTTT\n+GTTCGGTTCGGATATAGTTCGTCCAATAGGGCGGCAAGTGCAAAAACAAA\n+GACGAAATCCACTTTAACTGCGGCGAGGAA\n >sample2\n GAAAATCATTCATTTGGAATTGTAATCACCTATGCACTTTGGTATAAGCT\n TTTCTGTGCACATTTTCCTGGAAAATGAATGAGACTCCTCGGCAGCCATT\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/predict_scratch/Genus_species.discrepency.report.txt
--- a/test-data/predict_scratch/Genus_species.discrepency.report.txt Sun Jan 22 17:30:57 2023 +0000
+++ b/test-data/predict_scratch/Genus_species.discrepency.report.txt Thu Apr 13 17:16:35 2023 +0000

b'@@ -3,11 +3,12 @@\n Summary\n DISC_PROTEIN_NAMES:All proteins have same name "hypothetical protein"\n DISC_SOURCE_QUALS_ASNDISC:taxname (all present, all same)\n-DISC_FEATURE_COUNT:gene: 16 present\n-DISC_FEATURE_COUNT:CDS: 16 present\n-DISC_FEATURE_COUNT:mRNA: 16 present\n+DISC_FEATURE_COUNT:gene: 70 present\n+DISC_FEATURE_COUNT:CDS: 69 present\n+DISC_FEATURE_COUNT:mRNA: 69 present\n+DISC_FEATURE_COUNT:tRNA: 1 present\n DISC_COUNT_NUCLEOTIDES:4 nucleotide Bioseqs are present\n-JOINED_FEATURES:26 features have joined locations.\n+JOINED_FEATURES:116 features have joined locations.\n NO_ANNOTATION:2 bioseqs have no features\n DISC_QUALITY_SCORES:Quality scores are missing on all sequences.\n FATAL: DISC_BACTERIAL_PARTIAL_NONEXTENDABLE_PROBLEMS:1 features have partial ends that do not abut the end of the sequence or a gap, and cannot be extended by 3 or fewer nucleotides to do so\n@@ -16,7 +17,7 @@\n MOLTYPE_NOT_MRNA:4 molecule types are not set as mRNA.\n TECHNIQUE_NOT_TSA:4 technique are not set as TSA\n MISSING_STRUCTURED_COMMENT:4 sequences do not include structured comments.\n-MISSING_PROJECT:20 sequences do not include project.\n+MISSING_PROJECT:73 sequences do not include project.\n DISC_INCONSISTENT_MOLINFO_TECH:Molinfo Technique Report (some missing, all same)\n \n \n@@ -26,43 +27,134 @@\n \n DiscRep_ALL:DISC_SOURCE_QUALS_ASNDISC::taxname (all present, all same)\n DiscRep_SUB:DISC_SOURCE_QUALS_ASNDISC::4 sources have \'Genus species\' for taxname\n-DiscRep_ALL:DISC_FEATURE_COUNT::gene: 16 present\n-DiscRep_ALL:DISC_FEATURE_COUNT::CDS: 16 present\n-DiscRep_ALL:DISC_FEATURE_COUNT::mRNA: 16 present\n+DiscRep_ALL:DISC_FEATURE_COUNT::gene: 70 present\n+DiscRep_ALL:DISC_FEATURE_COUNT::CDS: 69 present\n+DiscRep_ALL:DISC_FEATURE_COUNT::mRNA: 69 present\n+DiscRep_ALL:DISC_FEATURE_COUNT::tRNA: 1 present\n DiscRep_ALL:DISC_COUNT_NUCLEOTIDES::4 nucleotide Bioseqs are present\n-genome:sample (length 215740)\n+genome:sample (length 720580)\n genome:sample2 (length 2030)\n genome:sample3 (length 2100)\n genome:sample4 (length 7560)\n \n-DiscRep_ALL:JOINED_FEATURES::26 features have joined locations.\n-DiscRep_SUB:JOINED_FEATURES::26 features have joined location but no exception\n-genome:CDS\thypothetical protein\t(sample4:2126-2199, 2258-3224, 3284->3537)\tFUN_000016\n-genome:mRNA\thypothetical protein\t(sample4:2126-2199, 2258-3224, 3284->3537)\tFUN_000016\n-genome:mRNA\thypothetical protein\t(sample:c3142-3138, c3004-2883, c2686-2565)\tFUN_000002\n-genome:CDS\thypothetical protein\t(sample:c3142-3138, c3004-2883, c2686-2565)\tFUN_000002\n-genome:mRNA\thypothetical protein\t(sample:c5802-5797, c5539-4937, c4742-4248)\tFUN_000003\n-genome:CDS\thypothetical protein\t(sample:c5802-5797, c5539-4937, c4742-4248)\tFUN_000003\n-genome:CDS\thypothetical protein\t(sample:c10664-10657, c10499-8707, c8385-7691)\tFUN_000004\n-genome:mRNA\thypothetical protein\t(sample:c10664-10657, c10499-8707, c8385-7691)\tFUN_000004\n-genome:mRNA\thypothetical protein\t(sample:c15214-15209, c14648-14247)\tFUN_000005\n-genome:CDS\thypothetical protein\t(sample:c15214-15209, c14648-14247)\tFUN_000005\n-genome:CDS\thypothetical protein\t(sample:15539-15543, 15646-15919, 16485-16619)\tFUN_000006\n-genome:mRNA\thypothetical protein\t(sample:15539-15543, 15646-15919, 16485-16619)\tFUN_000006\n-genome:CDS\thypothetical protein\t(sample:c21705-21700, c21515-19638, c19482-18358)\tFUN_000007\n-genome:mRNA\thypothetical protein\t(sample:c21705-21700, c21515-19638, c19482-18358)\tFUN_000007\n-genome:CDS\thypothetical protein\t(sample:40223-40396, 40659-41193, 41707-42080, 43409-43609, 43678-44130)\tFUN_000009\n-genome:mRNA\thypothetical protein\t(sample:40223-40396, 40659-41193, 41707-42080, 43409-43609, 43678-44130)\tFUN_000009\n-genome:mRNA\thypothetical protein\t(sample:87202-87207, 88054-88320)\tFUN_000010\n-genome:CDS\thypothetical protein\t(sample:87202-87207, 88054-88320)\tFUN_000010\n-genome:CDS\thypothetical protein\t(sample:c106221-106216, c104632-104258, c103947-103696, c103618-103229, c103151-102510)\tFUN_000011\n-genome:mRNA\thypothetical protein\t(sample:c106221-106216, c104632-1'..b'h 215740)\n-genome:ncbi:FUN_000001-T1 (length 124)\n-genome:ncbi:FUN_000002-T1 (length 82)\n-genome:ncbi:FUN_000003-T1 (length 367)\n-genome:ncbi:FUN_000004-T1 (length 831)\n-genome:ncbi:FUN_000005-T1 (length 135)\n-genome:ncbi:FUN_000006-T1 (length 137)\n-genome:ncbi:FUN_000007-T1 (length 1002)\n-genome:ncbi:FUN_000008-T1 (length 278)\n-genome:ncbi:FUN_000009-T1 (length 578)\n-genome:ncbi:FUN_000010-T1 (length 90)\n-genome:ncbi:FUN_000011-T1 (length 554)\n-genome:ncbi:FUN_000012-T1 (length 479)\n-genome:ncbi:FUN_000013-T1 (length 61)\n-genome:ncbi:FUN_000014-T1 (length 484)\n+DiscRep_ALL:MISSING_PROJECT::73 sequences do not include project.\n+genome:sample (length 720580)\n+genome:ncbi:FUN_000001-T1 (length 458)\n+genome:ncbi:FUN_000002-T1 (length 375)\n+genome:ncbi:FUN_000003-T1 (length 957)\n+genome:ncbi:FUN_000004-T1 (length 2136)\n+genome:ncbi:FUN_000005-T1 (length 315)\n+genome:ncbi:FUN_000006-T1 (length 278)\n+genome:ncbi:FUN_000007-T1 (length 365)\n+genome:ncbi:FUN_000008-T1 (length 171)\n+genome:ncbi:FUN_000009-T1 (length 132)\n+genome:ncbi:FUN_000010-T1 (length 338)\n+genome:ncbi:FUN_000011-T1 (length 294)\n+genome:ncbi:FUN_000012-T1 (length 341)\n+genome:ncbi:FUN_000013-T1 (length 589)\n+genome:ncbi:FUN_000014-T1 (length 146)\n+genome:ncbi:FUN_000015-T1 (length 576)\n+genome:ncbi:FUN_000016-T1 (length 139)\n+genome:ncbi:FUN_000017-T1 (length 224)\n+genome:ncbi:FUN_000018-T1 (length 151)\n+genome:ncbi:FUN_000019-T1 (length 68)\n+genome:ncbi:FUN_000020-T1 (length 182)\n+genome:ncbi:FUN_000021-T1 (length 193)\n+genome:ncbi:FUN_000022-T1 (length 550)\n+genome:ncbi:FUN_000023-T1 (length 515)\n+genome:ncbi:FUN_000024-T1 (length 96)\n+genome:ncbi:FUN_000025-T1 (length 277)\n+genome:ncbi:FUN_000026-T1 (length 406)\n+genome:ncbi:FUN_000027-T1 (length 635)\n+genome:ncbi:FUN_000028-T1 (length 1138)\n+genome:ncbi:FUN_000029-T1 (length 307)\n+genome:ncbi:FUN_000030-T1 (length 229)\n+genome:ncbi:FUN_000031-T1 (length 397)\n+genome:ncbi:FUN_000032-T1 (length 430)\n+genome:ncbi:FUN_000033-T1 (length 214)\n+genome:ncbi:FUN_000034-T1 (length 67)\n+genome:ncbi:FUN_000035-T1 (length 506)\n+genome:ncbi:FUN_000036-T1 (length 143)\n+genome:ncbi:FUN_000037-T1 (length 785)\n+genome:ncbi:FUN_000038-T1 (length 198)\n+genome:ncbi:FUN_000039-T1 (length 501)\n+genome:ncbi:FUN_000040-T1 (length 282)\n+genome:ncbi:FUN_000041-T1 (length 562)\n+genome:ncbi:FUN_000042-T1 (length 186)\n+genome:ncbi:FUN_000043-T1 (length 215)\n+genome:ncbi:FUN_000044-T1 (length 170)\n+genome:ncbi:FUN_000045-T1 (length 550)\n+genome:ncbi:FUN_000046-T1 (length 392)\n+genome:ncbi:FUN_000047-T1 (length 231)\n+genome:ncbi:FUN_000048-T1 (length 179)\n+genome:ncbi:FUN_000049-T1 (length 280)\n+genome:ncbi:FUN_000050-T1 (length 117)\n+genome:ncbi:FUN_000051-T1 (length 120)\n+genome:ncbi:FUN_000052-T1 (length 209)\n+genome:ncbi:FUN_000053-T1 (length 132)\n+genome:ncbi:FUN_000054-T1 (length 268)\n+genome:ncbi:FUN_000055-T1 (length 687)\n+genome:ncbi:FUN_000056-T1 (length 207)\n+genome:ncbi:FUN_000057-T1 (length 131)\n+genome:ncbi:FUN_000058-T1 (length 527)\n+genome:ncbi:FUN_000059-T1 (length 271)\n+genome:ncbi:FUN_000060-T1 (length 1569)\n+genome:ncbi:FUN_000062-T1 (length 477)\n+genome:ncbi:FUN_000063-T1 (length 1091)\n+genome:ncbi:FUN_000064-T1 (length 157)\n+genome:ncbi:FUN_000065-T1 (length 394)\n+genome:ncbi:FUN_000066-T1 (length 293)\n+genome:ncbi:FUN_000067-T1 (length 370)\n+genome:ncbi:FUN_000068-T1 (length 438)\n genome:sample2 (length 2030)\n genome:sample3 (length 2100)\n genome:sample4 (length 7560)\n-genome:ncbi:FUN_000015-T1 (length 124)\n-genome:ncbi:FUN_000016-T1 (length 432)\n+genome:ncbi:FUN_000069-T1 (length 458)\n+genome:ncbi:FUN_000070-T1 (length 375)\n \n DiscRep_ALL:DISC_INCONSISTENT_MOLINFO_TECH::Molinfo Technique Report (some missing, all same)\n DiscRep_SUB:DISC_INCONSISTENT_MOLINFO_TECH::technique (all missing)\n DiscRep_SUB:DISC_INCONSISTENT_MOLINFO_TECH::4 Molinfos are missing field technique\n-genome:sample (length 215740)\n+genome:sample (length 720580)\n genome:sample2 (length 2030)\n genome:sample3 (length 2100)\n genome:sample4 (length 7560)\n'

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/predict_scratch/Genus_species.error.summary.txt
--- a/test-data/predict_scratch/Genus_species.error.summary.txt Sun Jan 22 17:30:57 2023 +0000
+++ b/test-data/predict_scratch/Genus_species.error.summary.txt Thu Apr 13 17:16:35 2023 +0000

@@ -0,0 +1,1 @@
+ 1 WARNING: SEQ_FEAT.ShortExon

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/predict_scratch/Genus_species.stats.json
--- a/test-data/predict_scratch/Genus_species.stats.json Sun Jan 22 17:30:57 2023 +0000
+++ b/test-data/predict_scratch/Genus_species.stats.json Thu Apr 13 17:16:35 2023 +0000

@@ -1,11 +1,11 @@
{
     "format": "annotation",
-    "command": "/home/abretaud/miniconda3/envs/__funannotate@1.8.7/bin/funannotate predict --input /tmp/tmpm833xrq1/files/e/1/c/dataset_e1c34c74-e579-4cab-b0ed-5ce938ce4e4b.dat --out output --database /home/abretaud/.planemo/planemo_tmp_yntx6ieu/test-data/funannotate_db --species Genus species --isolate  --strain  --organism other --ploidy 1 --SeqCenter CFMR --SeqAccession 12345 --name FUN_ --numbering 1 --p2g_pident 80 --p2g_prefilter diamond --min_training_models 3 --busco_seed_species fly --busco_db insecta --evm-partition-interval 1500 --min_intronlen 10 --max_intronlen 3000 --min_protlen 50 --repeat_filter overlap blast --cpus 1",
+    "command": "/home/abretaud/miniconda3/envs/__funannotate@1.8.15/bin/funannotate predict --input input/input.fasta --out output --database /home/abretaud/git/iuc_tools/tools/funannotate/test-data/funannotate_db --species Genus species --isolate  --strain  --organism other --ploidy 1 --SeqCenter CFMR --SeqAccession 12345 --name FUN_ --numbering 1 --p2g_pident 80 --p2g_prefilter diamond --busco_seed_species fly --busco_db insecta --min_training_models 3 --evm-partition-interval 1500 --min_intronlen 10 --max_intronlen 3000 --min_protlen 50 --repeat_filter overlap blast --cpus 1",
     "organism": "Genus_species",
     "software": {
         "name": "funannotate",
-        "version": "1.8.7",
-        "date": "2021-07-21",
+        "version": "1.8.15",
+        "date": "2023-04-13",
         "resources": {
             "merops": {
                 "type": "diamond",
@@ -71,38 +71,38 @@
     },
     "assembly": {
         "num_contigs": 4,
-        "length": 227430,
-        "mean_length": 56857.5,
-        "N50": 215740,
+        "length": 732270,
+        "mean_length": 183067.5,
+        "N50": 720580,
         "L50": 1,
-        "N90": 215740,
+        "N90": 720580,
         "L90": 1,
-        "GC_content": 42.86
+        "GC_content": 43.15
     },
     "annotation": {
-        "genes": 16,
+        "genes": 70,
         "common_name": 0,
-        "mRNA": 16,
-        "tRNA": 0,
+        "mRNA": 69,
+        "tRNA": 1,
         "ncRNA": 0,
         "rRNA": 0,
-        "avg_gene_length": 1660.69,
+        "avg_gene_length": 1544.77,
         "transcript-level": {
-            "CDS_transcripts": 16,
+            "CDS_transcripts": 69,
             "CDS_five_utr": 0,
             "CDS_three_utr": 0,
-            "CDS_no_utr": 16,
+            "CDS_no_utr": 69,
             "CDS_five_three_utr": 0,
-            "CDS_complete": 15,
+            "CDS_complete": 68,
             "CDS_no-start": 0,
             "CDS_no-stop": 1,
             "CDS_no-start_no-stop": 0,
-            "total_exons": 42,
-            "total_cds_exons": 42,
-            "multiple_exon_transcript": 13,
-            "single_exon_transcript": 3,
-            "avg_exon_length": 402.36,
-            "avg_protein_length": 359.81,
+            "total_exons": 209,
+            "total_cds_exons": 209,
+            "multiple_exon_transcript": 58,
+            "single_exon_transcript": 11,
+            "avg_exon_length": 362.67,
+            "avg_protein_length": 393.62,
             "functional": {
                 "go_terms": 0,
                 "interproscan": 0,
@@ -113,7 +113,7 @@
                 "busco": 0,
                 "secretion": 0
             },
-            "pct_exon_overlap_protein_evidence": 11.9
+            "pct_exon_overlap_protein_evidence": 3.81
         }
     }
}
\ No newline at end of file

diff -r 7abc5f6dd595 -r 51b6ee65ef7f test-data/predict_scratch/Genus_species.validation.txt
--- a/test-data/predict_scratch/Genus_species.validation.txt Sun Jan 22 17:30:57 2023 +0000
+++ b/test-data/predict_scratch/Genus_species.validation.txt Thu Apr 13 17:16:35 2023 +0000

[

@@ -0,0 +1,1 @@
+WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|sample:391297-391301, 391479-391489, 391758-392254, 392500-392851, 393283-393638)] [lcl|sample: raw, dna len= 720580] -> [gnl|ncbi|FUN_000026-T1]