Repository 'package_tophat_2_0_14'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/package_tophat_2_0_14

Changeset 3:536f7bb5616d (2015-05-14)
Previous changeset 2:7e9f2c0ccf89 (2015-05-14) Next changeset 4:b13271391f95 (2015-11-06)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_tophat_2_0_14 commit 93bd8341966e13b91bbcb2b9bce75f0c0e7e1d92
modified:
tool_dependencies.xml
b
diff -r 7e9f2c0ccf89 -r 536f7bb5616d tool_dependencies.xml
--- a/tool_dependencies.xml Thu May 14 10:01:33 2015 -0400
+++ b/tool_dependencies.xml Thu May 14 10:24:01 2015 -0400
b
@@ -9,6 +9,7 @@
                         <source_directory>.</source_directory>
                         <destination_directory>$INSTALL_DIR</destination_directory>
                     </action>
+                    <action type="shell_command">sed -i.bak 's#/build/dest#$INSTALL_DIR#' $INSTALL_DIR/bin/tophat2</action>
                 </actions>
                 <actions>
                     <action type="download_by_url">http://ccb.jhu.edu/software/tophat/downloads/tophat-2.0.14.tar.gz</action>