Repository 'scanpy_multiplet_scrublet'
hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_multiplet_scrublet

Changeset 8:53ce0e336840 (2024-05-15)
Previous changeset 7:2f9517a24c73 (2024-02-27)
Commit message:
planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 1161fdc6d874689d9a7a10bbe22b7758b2edc4bf-dirty
modified:
scanpy-multiplet-scrublet.xml
b
diff -r 2f9517a24c73 -r 53ce0e336840 scanpy-multiplet-scrublet.xml
--- a/scanpy-multiplet-scrublet.xml Tue Feb 27 16:42:08 2024 +0000
+++ b/scanpy-multiplet-scrublet.xml Wed May 15 09:40:10 2024 +0000
b
@@ -114,7 +114,7 @@
 
     Predict cell doublets using a nearest-neighbor classifier of observed transcriptomes and simulated doublets. Works best if the input is a raw (unnormalized) counts matrix from a single sample or a collection of similar samples from the same experiment. This function is a wrapper around functions that pre-process using Scanpy and directly call functions of Scrublet(). 
 
-    This is a wrapper around the Scanpy wrapper for Scrublet- see https://scanpy.readthedocs.io/en/stable/generated/scanpy.external.pp.scrublet.html.
+    This is a wrapper around the Scanpy wrapper for Scrublet- see https://scanpy.readthedocs.io/en/stable/api/generated/scanpy.pp.scrublet.html.
 
     **Note**