| Previous changeset 9:2bda64d39931 (2014-11-26) Next changeset 11:01b38f20197e (2015-09-04) |
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Commit message:
Uploaded v0.0.20 with new citation information |
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modified:
README.rst blast.py |
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| diff -r 2bda64d39931 -r 5482a8cd0f36 README.rst --- a/README.rst Wed Nov 26 06:55:48 2014 -0500 +++ b/README.rst Wed Feb 25 10:52:35 2015 -0500 |
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| @@ -41,11 +41,12 @@ (contribution from Nicola Soranzo) v0.0.18 - Add retries to BLAST XML merge code. - Modify display_data method to allow unit tests to function. -v0.0.19 - Add ``blastdbp`` datatype for BLAST protein domain databases, for use +v0.0.19 - Add ``blastdbd`` datatype for BLAST protein domain databases, for use with makeprofiledb and rpsblast (contribution from Bjoern Gruening). - Add ``pssm-asn1`` datatype for Position Specific Scoring Matrices (PSSMs) stored in NCBI's "scoremat" ASN.1 format (usually named - as *.smp), used as input files for makeprofiledb. + as ``*.smp``), used as input files for makeprofiledb. +v0.0.20 - Added "NCBI BLAST+ integrated into Galaxy" preprint citation. ======= ====================================================================== @@ -118,6 +119,16 @@ described above. +Citation +======== + +Please cite the following paper (currently available as a preprint): + +NCBI BLAST+ integrated into Galaxy. +P.J.A. Cock, J.M. Chilton, B. Gruening, J.E. Johnson, N. Soranzo +bioRxiv DOI: http://dx.doi.org/10.1101/014043 (preprint) + + Licence (MIT) ============= |
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| diff -r 2bda64d39931 -r 5482a8cd0f36 blast.py --- a/blast.py Wed Nov 26 06:55:48 2014 -0500 +++ b/blast.py Wed Feb 25 10:52:35 2015 -0500 |
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| @@ -76,7 +76,6 @@ log.error("BLAST XML file %s missing" % f) raise ValueError("BLAST XML file %s missing" % f) h = open(f) - body = False header = h.readline() if not header: out.close() |