| Previous changeset 2:baf1e89b42eb (2019-03-05) Next changeset 4:727c0e52e64e (2019-03-05) |
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Commit message:
Modified config builder |
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modified:
galaxy/tools/config_builder/config_builder.xml |
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| diff -r baf1e89b42eb -r 56f1b7f06222 galaxy/tools/config_builder/config_builder.xml --- a/galaxy/tools/config_builder/config_builder.xml Tue Mar 05 02:36:40 2019 -0500 +++ b/galaxy/tools/config_builder/config_builder.xml Tue Mar 05 03:41:14 2019 -0500 |
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| @@ -5,7 +5,7 @@ </requirements> <command><![CDATA[ - PATHOGIST all config.yaml --new_config + PATHOGIST all blank_config.yaml --new_config $__tool_directory__/config_builder @@ -87,19 +87,18 @@ $adv_clustering.presolve $adv_clustering.visualize #endif + + blank_onfig.yaml + $forward + $reverse + config.yaml ]]></command> <inputs> - <!--<conditional name="task">--> - <!--<param name="task_selector" type="select" label="Create Blank Config or Populate Config File">--> - <!--<option value="create">Create Blank Config File</option>--> - <!--<option value="populate">Populate Config File</option>--> - <!--</param>--> - <!--<when value="create">--> + <param name="forward" type="data" format="txt,tabular" label="List of forward reads"/> + <param name="reverse" type="data" format="txt,tabular" label="List of reverse reads"/> - <!--</when>--> - <!--<when value="populate">--> <conditional name="snippy"> <param name="snippy_checkbox" type="boolean" label="Run Snippy"/> <when value="true"> @@ -187,7 +186,7 @@ <param name="kwip_checkbox" type="boolean" label="Run kWIP"/> <when value="true"> <conditional name="kwip_adv"> - <param name="kwip_adv_checkbox" type="boolean" label="Advance kWIP Parameters"/> + <param name="kwip_adv_checkbox" type="boolean" label="Advanced kWIP Parameters"/> <when value="true"> <param name="N" type="integer" value="1" min="1" label="Number of tables"/> <param name="x" type="float" value="1e9" min="1" label="Maximum table size"/> @@ -225,8 +224,6 @@ label="Visualize clusters"/> </when> </conditional> - <!--</when>--> - <!--</conditional>--> </inputs> <outputs> |