Repository 'fastq_quality_filter'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/fastq_quality_filter

Changeset 1:57adb07cccfc (2013-12-03)
Previous changeset 0:b145b9b26648 (2013-09-25) Next changeset 2:e41385662e5e (2015-11-11)
Commit message:
Removed excess version attributes.
modified:
fastq_quality_filter.xml
b
diff -r b145b9b26648 -r 57adb07cccfc fastq_quality_filter.xml
--- a/fastq_quality_filter.xml Wed Sep 25 11:02:21 2013 -0400
+++ b/fastq_quality_filter.xml Tue Dec 03 12:36:13 2013 -0500
b
@@ -10,13 +10,13 @@
  </command>
 
  <inputs>
- <param format="fastqsolexa,fastqsanger" version="1.0.0" name="input" type="data" label="Library to filter" />
+ <param format="fastqsolexa,fastqsanger" name="input" type="data" label="Library to filter" />
 
- <param version="1.0.0" name="quality" size="4" type="integer" value="20">
+ <param name="quality" size="4" type="integer" value="20">
  <label>Quality cut-off value</label>
  </param>
 
- <param version="1.0.0" name="percent" size="4" type="integer" value="90">
+ <param name="percent" size="4" type="integer" value="90">
  <label>Percent of bases in sequence that must have quality equal to / higher than cut-off value</label>
  </param>
  </inputs>
@@ -24,22 +24,22 @@
  <tests>
  <test>
  <!-- Test1:  100% of bases with quality 33 or higher (pretty steep requirement...) -->
- <param version="1.0.0" name="input" value="fastq_qual_filter1.fastq" ftype="fastqsolexa" />
- <param version="1.0.0" name="quality" value="33"/>
- <param version="1.0.0" name="percent" value="100"/>
- <output version="1.0.0" name="output" file="fastq_qual_filter1a.out" />
+ <param name="input" value="fastq_qual_filter1.fastq" ftype="fastqsolexa" />
+ <param name="quality" value="33"/>
+ <param name="percent" value="100"/>
+ <param name="output" file="fastq_qual_filter1a.out" />
  </test>
  <test>
  <!-- Test2:  80% of bases with quality 20 or higher -->
- <param version="1.0.0" name="input" value="fastq_qual_filter1.fastq" ftype="fastqsolexa"/>
- <param version="1.0.0" name="quality" value="20"/>
- <param version="1.0.0" name="percent" value="80"/>
- <output version="1.0.0" name="output" file="fastq_qual_filter1b.out" />
+ <param name="input" value="fastq_qual_filter1.fastq" ftype="fastqsolexa"/>
+ <param name="quality" value="20"/>
+ <param name="percent" value="80"/>
+ <param name="output" file="fastq_qual_filter1b.out" />
  </test>
  </tests>
 
  <outputs>
- <data format="input" version="1.0.0" name="output" metadata_source="input" />
+ <data format="input" name="output" metadata_source="input" />
  </outputs>
 
  <help>