| Previous changeset 6:5fc2acd6de43 (2018-10-30) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c" |
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modified:
core_diversity_analyses.xml macros.xml |
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| diff -r 5fc2acd6de43 -r 57deb17cadbf core_diversity_analyses.xml --- a/core_diversity_analyses.xml Tue Oct 30 19:30:31 2018 -0400 +++ b/core_diversity_analyses.xml Thu Dec 05 07:36:19 2019 -0500 |
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| @@ -1,4 +1,4 @@ -<tool id="qiime_core_diversity" name="Run a core set of QIIME diversity analyses" version="@WRAPPER_VERSION@.0"> +<tool id="qiime_core_diversity" name="Run a core set of QIIME diversity analyses" version="@WRAPPER_VERSION@.0" profile="@PROFILE@"> <description>(core_diversity_analyses)</description> <macros> <import>macros.xml</import> @@ -6,9 +6,7 @@ <expand macro="requirements"/> <version_command>core_diversity_analyses.py --version</version_command> <command detect_errors="aggressive"><![CDATA[ -## set matplotlib backend -echo "backend:agg" > matplotlibrc && - +@MPLBACKEND@ core_diversity_analyses.py --input_biom_fp '$input_biom_fp' -o core_diversity_analyses |
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| diff -r 5fc2acd6de43 -r 57deb17cadbf macros.xml --- a/macros.xml Tue Oct 30 19:30:31 2018 -0400 +++ b/macros.xml Thu Dec 05 07:36:19 2019 -0500 |
| [ |
| @@ -1,6 +1,8 @@ <?xml version="1.0" ?> <macros> + <token name="@PROFILE@">18.01</token> <token name="@WRAPPER_VERSION@">1.9.1</token> + <token name="@MPLBACKEND@"><![CDATA[export MPLBACKEND=Agg && echo "backend:agg" > matplotlibrc &&]]></token> <xml name="requirements"> <requirements> <requirement type="package" version="@WRAPPER_VERSION@">qiime</requirement> |