Repository 'chembl'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/chembl

Changeset 4:59eea7d0d720 (2020-05-19)
Previous changeset 3:8b6ba267714b (2020-04-01) Next changeset 5:1ade252ebe08 (2020-07-28)
Commit message:
"planemo upload for repository https://github.com/chembl/chembl_webresource_client commit f5c316339ed36a0469f4862d00fa0e5cafebc041"
modified:
chembl.py
chembl.xml
test-data/in1.smi
b
diff -r 8b6ba267714b -r 59eea7d0d720 chembl.py
--- a/chembl.py Wed Apr 01 07:04:25 2020 -0400
+++ b/chembl.py Tue May 19 05:34:34 2020 -0400
[
@@ -5,7 +5,7 @@
 
 def open_file(filename):
     with open(filename) as f:
-        return f.readline()
+        return f.readline().split()[0]
 
 def get_smiles(res):
     """
b
diff -r 8b6ba267714b -r 59eea7d0d720 chembl.xml
--- a/chembl.xml Wed Apr 01 07:04:25 2020 -0400
+++ b/chembl.xml Tue May 19 05:34:34 2020 -0400
[
@@ -1,10 +1,11 @@
-<tool id="chembl" name="Search ChEMBL database" version="@VERSION@">
+<tool id="chembl" name="Search ChEMBL database" version="@TOOL_VERSION@+galaxy@GALAXY_VERSION@">
     <macros>
-        <token name="@VERSION@">0.10.1</token>
+        <token name="@TOOL_VERSION@">0.10.1</token>
+        <token name="@GALAXY_VERSION@">1</token>
     </macros>
     <description>for compounds which are similar to a SMILES string</description>
     <requirements>
-        <requirement type="package" version="@VERSION@">chembl_webresource_client</requirement>
+        <requirement type="package" version="@TOOL_VERSION@">chembl_webresource_client</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
         python -W ignore '$__tool_directory__/chembl.py'
b
diff -r 8b6ba267714b -r 59eea7d0d720 test-data/in1.smi
--- a/test-data/in1.smi Wed Apr 01 07:04:25 2020 -0400
+++ b/test-data/in1.smi Tue May 19 05:34:34 2020 -0400
[
@@ -1,1 +1,1 @@
-CN1CCC[C@H]1c2cccnc2
+CN1CCC[C@H]1c2cccnc2 test