Repository 'argalaxy_tools'
hg clone https://toolshed.g2.bx.psu.edu/repos/davidvanzessen/argalaxy_tools

Changeset 60:5a45335f67f0 (2025-03-26)
Previous changeset 59:14cecb0cac92 (2025-02-04) Next changeset 61:f38a058e1a74 (2025-04-30)
Commit message:
planemo upload commit a6311946297fd040bc4d1cf9808282d60770ce81
modified:
CHANGES.md
complete_immunerepertoire.xml
b
diff -r 14cecb0cac92 -r 5a45335f67f0 CHANGES.md
--- a/CHANGES.md Tue Feb 04 10:51:02 2025 +0000
+++ b/CHANGES.md Wed Mar 26 14:30:06 2025 +0000
b
@@ -1,3 +1,7 @@
+version 1.1.3
+-------------
++ Fix an issue where the tool script could not be found.
+
 version 1.1.2
 -------------
 + Set a profile version so exiting with a tool exit code of 0 will indicate
b
diff -r 14cecb0cac92 -r 5a45335f67f0 complete_immunerepertoire.xml
--- a/complete_immunerepertoire.xml Tue Feb 04 10:51:02 2025 +0000
+++ b/complete_immunerepertoire.xml Wed Mar 26 14:30:06 2025 +0000
b
@@ -1,4 +1,4 @@
-<tool id="complete_immunerepertoire_igg" name="Immune Repertoire pipeline" version="1.1.2" profile="16.04">
+<tool id="complete_immunerepertoire_igg" name="Immune Repertoire pipeline" version="1.1.3" profile="16.04">
  <requirements>
         <requirement type="package" version="2.3">r-gridextra</requirement>
         <requirement type="package" version="3.0.0">r-ggplot2</requirement>
@@ -19,7 +19,7 @@
  </requirements>
  <description> </description>
  <command interpreter="bash">
-complete.sh "
+bash $__tool_directory__/complete.sh "
 #for $i, $f in enumerate($patients)
  "${f.id}"
  #for $j, $g in enumerate($f.samples)