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tool_dependencies.xml |
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diff -r 7d66b50885d1 -r 60266bea92bb tool_dependencies.xml --- a/tool_dependencies.xml Fri Feb 14 12:45:06 2014 -0500 +++ b/tool_dependencies.xml Fri Feb 14 14:51:42 2014 -0500 |
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@@ -1,5 +1,8 @@ <?xml version="1.0"?> <tool_dependency> + <set_environment version="1.0"> + <environment_variable name="PERL5LIB" action="set_to">$REPOSITORY_INSTALL_DIR/perl</environment_variable> + </set_environment> <package name="vcftools" version="0.1.11"> <install version="1.0"> <actions> @@ -11,13 +14,13 @@ <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/vcftools/bin</environment_variable> </action> + <action type="set_environment"> + <environment_variable name="PERL5LIB" action="prepend_to">$INSTALL_DIR/vcftools/lib/perl5/site_perl</environment_variable> + </action> </actions> </install> <readme> A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project </readme> </package> - <set_environment version="1.0"> - <environment_variable name="PERL5LIB" action="set_to">$REPOSITORY_INSTALL_DIR/perl</environment_variable> - </set_environment> </tool_dependency> \ No newline at end of file |