Repository 'seqkit_sort'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/seqkit_sort

Changeset 2:61eb4cfc7313 (2024-05-18)
Previous changeset 1:fdc21382376d (2024-03-29) Next changeset 3:29ef2c5ec205 (2024-11-06)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqkit commit 99c10c3df0424268179b3f54f89e01a34b9e120e
modified:
macros.xml
test-data/stats_output1.tabular
test-data/stats_output2.tabular
b
diff -r fdc21382376d -r 61eb4cfc7313 macros.xml
--- a/macros.xml Fri Mar 29 09:47:15 2024 +0000
+++ b/macros.xml Sat May 18 23:12:01 2024 +0000
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@@ -1,6 +1,6 @@
 <macros>
-    <token name="@TOOL_VERSION@">2.3.1</token>
-    <token name="@VERSION_SUFFIX@">1</token>
+    <token name="@TOOL_VERSION@">2.8.1</token>
+    <token name="@VERSION_SUFFIX@">0</token>
     <token name="@PROFILE@">20.09</token>
     <xml name="bio_tools">
         <xrefs>
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diff -r fdc21382376d -r 61eb4cfc7313 test-data/stats_output1.tabular
--- a/test-data/stats_output1.tabular Fri Mar 29 09:47:15 2024 +0000
+++ b/test-data/stats_output1.tabular Sat May 18 23:12:01 2024 +0000
b
@@ -1,2 +1,2 @@
-file format type num_seqs sum_len min_len avg_len max_len Q1 Q2 Q3 sum_gap N50 Q20(%) Q30(%) GC(%)
-input1_fastq_gz FASTQ DNA 5 505 101 101.0 101 50.5 101.0 50.5 0 101 98.02 89.31 35.45
+file format type num_seqs sum_len min_len avg_len max_len Q1 Q2 Q3 sum_gap N50 N50_num Q20(%) Q30(%) AvgQual GC(%)
+input1_fastq_gz FASTQ DNA 5 505 101 101.0 101 101.0 101.0 101.0 0 101 1 98.02 89.31 25.93 35.45
b
diff -r fdc21382376d -r 61eb4cfc7313 test-data/stats_output2.tabular
--- a/test-data/stats_output2.tabular Fri Mar 29 09:47:15 2024 +0000
+++ b/test-data/stats_output2.tabular Sat May 18 23:12:01 2024 +0000
b
@@ -1,2 +1,2 @@
-file format type num_seqs sum_len min_len avg_len max_len Q1 Q2 Q3 sum_gap N50 Q20(%) Q30(%) GC(%)
-input1_fasta_gz FASTA DNA 3 10732 1213 3577.3 4796 2968.0 4723.0 4759.5 0 4723 0.00 0.00 48.15
+file format type num_seqs sum_len min_len avg_len max_len Q1 Q2 Q3 sum_gap N50 N50_num Q20(%) Q30(%) AvgQual GC(%)
+input1_fasta_gz FASTA DNA 3 10732 1213 3577.3 4796 2968.0 4723.0 4759.5 0 4723 2 0.00 0.00 0.00 48.15