| Previous changeset 1:85da91bbdbfb (2019-06-18) Next changeset 3:1c5dcef5ce0f (2024-05-07) |
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Commit message:
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/plotly_ml_performance_plots commit 3752bb86fb42f0c98b6d6cbbd75e8d987f17a3fd" |
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modified:
plot_ml_performance.py plotly_ml_performance_plots.xml test-data/cnf_binary_knn.html test-data/cnf_binary_linearsvm.html test-data/cnf_binary_rfc.html test-data/cnf_binary_sgd.html test-data/cnf_multi_lr.html test-data/model_binary_knn.zip test-data/model_binary_sgd.zip test-data/prf_binary_knn.html test-data/prf_binary_linearsvm.html test-data/prf_binary_rfc.html test-data/prf_binary_sgd.html test-data/prf_multi_lr.html test-data/roc_auc_binary_knn.html test-data/roc_auc_binary_linearsvm.html test-data/roc_auc_binary_rfc.html test-data/roc_auc_binary_sgd.html test-data/roc_auc_multi_lr.html |
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| diff -r 85da91bbdbfb -r 62e3a4e8c54c plot_ml_performance.py --- a/plot_ml_performance.py Tue Jun 18 08:26:04 2019 -0400 +++ b/plot_ml_performance.py Thu Jan 16 13:49:49 2020 -0500 |
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| @@ -140,7 +140,7 @@ plotly.offline.plot(fig_roc, filename="output_roc.html", auto_open=False) except Exception as exp: - pass + print("Plotting the ROC-AUC graph failed. This exception was raised: {}".format(exp)) if __name__ == "__main__": |
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| diff -r 85da91bbdbfb -r 62e3a4e8c54c plotly_ml_performance_plots.xml --- a/plotly_ml_performance_plots.xml Tue Jun 18 08:26:04 2019 -0400 +++ b/plotly_ml_performance_plots.xml Thu Jan 16 13:49:49 2020 -0500 |
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| @@ -1,10 +1,10 @@ -<tool id="plotly_ml_performance_plots" name="Plot confusion matrix, precision, recall and ROC and AUC curves" version="0.1"> +<tool id="plotly_ml_performance_plots" name="Plot confusion matrix, precision, recall and ROC and AUC curves" version="0.2"> <description>of tabular data</description> <requirements> - <requirement type="package" version="0.22.0">pandas</requirement> - <requirement type="package" version="3.1.1">plotly</requirement> - <requirement type="package" version="0.19.1">scikit-learn</requirement> - <requirement type="package" version="1.1.0">scipy</requirement> + <requirement type="package" version="0.25.3">pandas</requirement> + <requirement type="package" version="4.3.0">plotly</requirement> + <requirement type="package" version="0.21.3">scikit-learn</requirement> + <requirement type="package" version="1.4.1">scipy</requirement> </requirements> <version_command>echo $version</version_command> <command detect_errors="aggressive"><![CDATA[ |
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| diff -r 85da91bbdbfb -r 62e3a4e8c54c test-data/cnf_binary_knn.html --- a/test-data/cnf_binary_knn.html Tue Jun 18 08:26:04 2019 -0400 +++ b/test-data/cnf_binary_knn.html Thu Jan 16 13:49:49 2020 -0500 |
| [ |
| b'@@ -1,14 +1,31 @@\n-<html><head><meta charset="utf-8" /></head><body><script type="text/javascript">/**\n-* plotly.js v1.39.4\n-* Copyright 2012-2018, Plotly, Inc.\n+<html>\n+<head><meta charset="utf-8" /></head>\n+<body>\n+ <div>\n+ \n+ <script type="text/javascript">window.PlotlyConfig = {MathJaxConfig: \'local\'};</script>\n+ <script type="text/javascript">/**\n+* plotly.js v1.51.1\n+* Copyright 2012-2019, Plotly, Inc.\n * All rights reserved.\n * Licensed under the MIT license\n */\n-!function(t){if("object"==typeof exports&&"undefined"!=typeof module)module.exports=t();else if("function"==typeof define&&define.amd)define([],t);else{("undefined"!=typeof window?window:"undefined"!=typeof global?global:"undefined"!=typeof self?self:this).Plotly=t()}}(function(){return function(){return function t(e,r,n){function i(o,s){if(!r[o]){if(!e[o]){var l="function"==typeof require&&require;if(!s&&l)return l(o,!0);if(a)return a(o,!0);var c=new Error("Cannot find module \'"+o+"\'");throw 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| diff -r 85da91bbdbfb -r 62e3a4e8c54c test-data/cnf_binary_linearsvm.html --- a/test-data/cnf_binary_linearsvm.html Tue Jun 18 08:26:04 2019 -0400 +++ b/test-data/cnf_binary_linearsvm.html Thu Jan 16 13:49:49 2020 -0500 |
| [ |
| b'@@ -1,14 +1,31 @@\n-<html><head><meta charset="utf-8" /></head><body><script type="text/javascript">/**\n-* plotly.js v1.39.4\n-* Copyright 2012-2018, Plotly, Inc.\n+<html>\n+<head><meta charset="utf-8" /></head>\n+<body>\n+ <div>\n+ \n+ <script type="text/javascript">window.PlotlyConfig = {MathJaxConfig: \'local\'};</script>\n+ <script type="text/javascript">/**\n+* plotly.js v1.51.1\n+* Copyright 2012-2019, Plotly, Inc.\n * All rights reserved.\n * Licensed under the MIT license\n */\n-!function(t){if("object"==typeof exports&&"undefined"!=typeof module)module.exports=t();else if("function"==typeof define&&define.amd)define([],t);else{("undefined"!=typeof window?window:"undefined"!=typeof global?global:"undefined"!=typeof self?self:this).Plotly=t()}}(function(){return function(){return function t(e,r,n){function i(o,s){if(!r[o]){if(!e[o]){var l="function"==typeof require&&require;if(!s&&l)return l(o,!0);if(a)return a(o,!0);var c=new Error("Cannot find module \'"+o+"\'");throw 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| diff -r 85da91bbdbfb -r 62e3a4e8c54c test-data/cnf_binary_rfc.html --- a/test-data/cnf_binary_rfc.html Tue Jun 18 08:26:04 2019 -0400 +++ b/test-data/cnf_binary_rfc.html Thu Jan 16 13:49:49 2020 -0500 |
| [ |
| b'@@ -1,14 +1,31 @@\n-<html><head><meta charset="utf-8" /></head><body><script type="text/javascript">/**\n-* plotly.js v1.39.4\n-* Copyright 2012-2018, Plotly, Inc.\n+<html>\n+<head><meta charset="utf-8" /></head>\n+<body>\n+ <div>\n+ \n+ <script type="text/javascript">window.PlotlyConfig = {MathJaxConfig: \'local\'};</script>\n+ <script type="text/javascript">/**\n+* plotly.js v1.51.1\n+* Copyright 2012-2019, Plotly, Inc.\n * All rights reserved.\n * Licensed under the MIT license\n */\n-!function(t){if("object"==typeof exports&&"undefined"!=typeof module)module.exports=t();else if("function"==typeof define&&define.amd)define([],t);else{("undefined"!=typeof window?window:"undefined"!=typeof global?global:"undefined"!=typeof self?self:this).Plotly=t()}}(function(){return function(){return function t(e,r,n){function i(o,s){if(!r[o]){if(!e[o]){var l="function"==typeof require&&require;if(!s&&l)return l(o,!0);if(a)return a(o,!0);var c=new Error("Cannot find module \'"+o+"\'");throw 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| b |
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| b |
| diff -r 85da91bbdbfb -r 62e3a4e8c54c test-data/prf_binary_rfc.html --- a/test-data/prf_binary_rfc.html Tue Jun 18 08:26:04 2019 -0400 +++ b/test-data/prf_binary_rfc.html Thu Jan 16 13:49:49 2020 -0500 |
| [ |
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| diff -r 85da91bbdbfb -r 62e3a4e8c54c test-data/prf_binary_sgd.html --- a/test-data/prf_binary_sgd.html Tue Jun 18 08:26:04 2019 -0400 +++ b/test-data/prf_binary_sgd.html Thu Jan 16 13:49:49 2020 -0500 |
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| b |
| diff -r 85da91bbdbfb -r 62e3a4e8c54c test-data/prf_multi_lr.html --- a/test-data/prf_multi_lr.html Tue Jun 18 08:26:04 2019 -0400 +++ b/test-data/prf_multi_lr.html Thu Jan 16 13:49:49 2020 -0500 |
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| diff -r 85da91bbdbfb -r 62e3a4e8c54c test-data/roc_auc_binary_knn.html --- a/test-data/roc_auc_binary_knn.html Tue Jun 18 08:26:04 2019 -0400 +++ b/test-data/roc_auc_binary_knn.html Thu Jan 16 13:49:49 2020 -0500 |
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| diff -r 85da91bbdbfb -r 62e3a4e8c54c test-data/roc_auc_binary_linearsvm.html --- a/test-data/roc_auc_binary_linearsvm.html Tue Jun 18 08:26:04 2019 -0400 +++ b/test-data/roc_auc_binary_linearsvm.html Thu Jan 16 13:49:49 2020 -0500 |
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| b |
| diff -r 85da91bbdbfb -r 62e3a4e8c54c test-data/roc_auc_binary_rfc.html --- a/test-data/roc_auc_binary_rfc.html Tue Jun 18 08:26:04 2019 -0400 +++ b/test-data/roc_auc_binary_rfc.html Thu Jan 16 13:49:49 2020 -0500 |
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| diff -r 85da91bbdbfb -r 62e3a4e8c54c test-data/roc_auc_binary_sgd.html --- a/test-data/roc_auc_binary_sgd.html Tue Jun 18 08:26:04 2019 -0400 +++ b/test-data/roc_auc_binary_sgd.html Thu Jan 16 13:49:49 2020 -0500 |
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| b |
| diff -r 85da91bbdbfb -r 62e3a4e8c54c test-data/roc_auc_multi_lr.html --- a/test-data/roc_auc_multi_lr.html Tue Jun 18 08:26:04 2019 -0400 +++ b/test-data/roc_auc_multi_lr.html Thu Jan 16 13:49:49 2020 -0500 |
| [ |
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