| Previous changeset 86:169a250816b4 (2017-10-06) Next changeset 88:422189e4041e (2017-10-06) |
|
Commit message:
Uploaded 20171006 |
|
modified:
loadandplot.xml |
|
added:
._loadandplot.R ._plotwithscale.R ._testandplot.R test-data/._.DS_Store test-data/input/._Controls_regions.bed test-data/input/._Elements1_regions.bed test-data/input/._Elements2_regions.bed test-data/input/._Elements3_regions.bed test-data/input/._Feature1.bed test-data/input/._Feature2.bed test-data/input/._features.header.bed.txt test-data/input/._regions.header.txt test-data/output_loadandplot/._iwtomics.loadandplot.RData test-data/output_loadandplot/._iwtomics.loadandplot.features.txt test-data/output_loadandplot/._iwtomics.loadandplot.pdf test-data/output_loadandplot/._iwtomics.loadandplot.regions.txt test-data/output_plotwithscale/._iwtomics.plotwithscale.adjustedpvalue.txt test-data/output_plotwithscale/._iwtomics.plotwithscale.iwtomicstestresults.pdf test-data/output_plotwithscale/._iwtomics.plotwithscale.summaryplot.pdf test-data/output_testandplot/._iwtomics.testandplot.RData test-data/output_testandplot/._iwtomics.testandplot.adjustedpvalue.matrix.txt test-data/output_testandplot/._iwtomics.testandplot.iwtomicstestresults.pdf test-data/output_testandplot/._iwtomics.testandplot.selectedfeatures.txt test-data/output_testandplot/._iwtomics.testandplot.summaryplot.pdf test-data/output_testandplot/._iwtomics.testandplot.tests.txt |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 ._loadandplot.R |
| b |
| Binary file ._loadandplot.R has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 ._plotwithscale.R |
| b |
| Binary file ._plotwithscale.R has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 ._testandplot.R |
| b |
| Binary file ._testandplot.R has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 loadandplot.xml --- a/loadandplot.xml Fri Oct 06 13:38:23 2017 -0400 +++ b/loadandplot.xml Fri Oct 06 14:33:47 2017 -0400 |
| [ |
| @@ -16,7 +16,7 @@ #set region_names = '|'.join( [ str( $r.name ) for $r in $regions ] ) regionsfilenames='${region_names}' #if $regionsheader: - regionsheaderfile='${region_header}' + regionsheaderfile='${regionsheader}' #end if #set feature_paths = '|'.join( [ str( $f ) for $f in $features ] ) @@ -26,7 +26,7 @@ #set feature_names = '|'.join( [ str( $f.name ) for $f in $features ] ) featuresfilenames='${feature_names}' #if $featuresheader: - featuresheaderfile='${feature_header}' + featuresheaderfile='${featuresheader}' #end if smoothing="'${conditionaltype.smoothing}'" |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/._.DS_Store |
| b |
| Binary file test-data/._.DS_Store has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/input/._Controls_regions.bed |
| b |
| Binary file test-data/input/._Controls_regions.bed has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/input/._Elements1_regions.bed |
| b |
| Binary file test-data/input/._Elements1_regions.bed has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/input/._Elements2_regions.bed |
| b |
| Binary file test-data/input/._Elements2_regions.bed has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/input/._Elements3_regions.bed |
| b |
| Binary file test-data/input/._Elements3_regions.bed has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/input/._Feature1.bed |
| b |
| Binary file test-data/input/._Feature1.bed has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/input/._Feature2.bed |
| b |
| Binary file test-data/input/._Feature2.bed has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/input/._features.header.bed.txt |
| b |
| Binary file test-data/input/._features.header.bed.txt has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/input/._regions.header.txt |
| b |
| Binary file test-data/input/._regions.header.txt has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_loadandplot/._iwtomics.loadandplot.RData |
| b |
| Binary file test-data/output_loadandplot/._iwtomics.loadandplot.RData has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_loadandplot/._iwtomics.loadandplot.features.txt |
| b |
| Binary file test-data/output_loadandplot/._iwtomics.loadandplot.features.txt has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_loadandplot/._iwtomics.loadandplot.pdf |
| b |
| Binary file test-data/output_loadandplot/._iwtomics.loadandplot.pdf has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_loadandplot/._iwtomics.loadandplot.regions.txt |
| b |
| Binary file test-data/output_loadandplot/._iwtomics.loadandplot.regions.txt has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_plotwithscale/._iwtomics.plotwithscale.adjustedpvalue.txt |
| b |
| Binary file test-data/output_plotwithscale/._iwtomics.plotwithscale.adjustedpvalue.txt has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_plotwithscale/._iwtomics.plotwithscale.iwtomicstestresults.pdf |
| b |
| Binary file test-data/output_plotwithscale/._iwtomics.plotwithscale.iwtomicstestresults.pdf has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_plotwithscale/._iwtomics.plotwithscale.summaryplot.pdf |
| b |
| Binary file test-data/output_plotwithscale/._iwtomics.plotwithscale.summaryplot.pdf has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_testandplot/._iwtomics.testandplot.RData |
| b |
| Binary file test-data/output_testandplot/._iwtomics.testandplot.RData has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_testandplot/._iwtomics.testandplot.adjustedpvalue.matrix.txt |
| b |
| Binary file test-data/output_testandplot/._iwtomics.testandplot.adjustedpvalue.matrix.txt has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_testandplot/._iwtomics.testandplot.iwtomicstestresults.pdf |
| b |
| Binary file test-data/output_testandplot/._iwtomics.testandplot.iwtomicstestresults.pdf has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_testandplot/._iwtomics.testandplot.selectedfeatures.txt |
| b |
| Binary file test-data/output_testandplot/._iwtomics.testandplot.selectedfeatures.txt has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_testandplot/._iwtomics.testandplot.summaryplot.pdf |
| b |
| Binary file test-data/output_testandplot/._iwtomics.testandplot.summaryplot.pdf has changed |
| b |
| diff -r 169a250816b4 -r 63c13d46bff8 test-data/output_testandplot/._iwtomics.testandplot.tests.txt |
| b |
| Binary file test-data/output_testandplot/._iwtomics.testandplot.tests.txt has changed |