Repository 'quality_filter'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/quality_filter

Changeset 1:64f5401327e8 (2014-10-30)
Previous changeset 0:8d65bbc52dfe (2014-04-01) Next changeset 2:6c6f15373f96 (2014-11-03)
Commit message:
Uploaded tool definition that does not fail on stderr output.
modified:
quality_filter.xml
b
diff -r 8d65bbc52dfe -r 64f5401327e8 quality_filter.xml
--- a/quality_filter.xml Tue Apr 01 10:52:42 2014 -0400
+++ b/quality_filter.xml Thu Oct 30 15:40:05 2014 -0400
b
@@ -22,6 +22,9 @@
  #end if
    ${GALAXY_DATA_INDEX_DIR}/quality_scores.loc
   </command>
+  <stdio>
+    <exit_code range="1:" level="fatal" description="Error" />
+  </stdio>
   <inputs>
     <param format="maf" name="input" type="data" label="Select data"/>
     <param name="primary_species" type="select" label="Use quality scores of" display="checkboxes" multiple="true">