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Commit message:
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/packages/package_humann2_0_6_1 commit 7aadbbdef6da644837f62ea428cb859eeff34f04-dirty |
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added:
tool_dependencies.xml |
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| diff -r 000000000000 -r 655e87ac3364 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Thu May 26 10:17:07 2016 -0400 |
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| @@ -0,0 +1,21 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="humann2" version="0.6.1"> + <install version="1.0"> + <actions> + <action type="download_by_url" md5sum="fae7549ac333b973badf7e99805d50d1">https://bitbucket.org/biobakery/humann2/downloads/humann2_v0.6.1.tar.gz</action> + <action type="make_directory">$INSTALL_DIR/lib/python</action> + <action type="shell_command"> + export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && + python setup.py install --bypass-dependencies-install --install-lib $INSTALL_DIR/lib/python --install-scripts=$INSTALL_DIR/</action> + <action type="make_directory">$INSTALL_DIR/databases</action> + <action type="set_environment"> + <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> + <environment_variable name="HUMANN2_DIR" action="set_to">$INSTALL_DIR/</environment_variable> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/</environment_variable> + </action> + </actions> + </install> + <readme></readme> + </package> +</tool_dependency> \ No newline at end of file |