| Previous changeset 0:54e961ee33d4 (2015-01-27) |
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Commit message:
Uploaded |
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modified:
tool_dependencies.xml |
| b |
| diff -r 54e961ee33d4 -r 6757330f89cd tool_dependencies.xml --- a/tool_dependencies.xml Tue Jan 27 09:02:04 2015 -0500 +++ b/tool_dependencies.xml Tue Feb 03 08:14:37 2015 -0500 |
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| @@ -1,15 +1,15 @@ <?xml version="1.0"?> <tool_dependency> - <package name="perl" version="5.18.1"> - <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> + <package name="perl" version="5.18.1"> + <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="vienna_rna" version="1.8.5"> - <install version="1.0"> - <actions> - <action type="download_by_url">http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-1.8.5.tar.gz</action> + <install version="1.0"> + <actions> + <action type="download_by_url">http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-1.8.5.tar.gz</action> <action type="set_environment_for_install"> - <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> - <package name="perl" version="5.18.1" /> + <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> + <package name="perl" version="5.18.1" /> </repository> </action> <action type="shell_command">./configure --prefix $INSTALL_DIR</action> @@ -17,8 +17,9 @@ <action type="shell_command">perl Makefile.PL PREFIX=$INSTALL_DIR/perl</action> <action type="change_directory">..</action> <action type="make_install" /> + <action type="set_environment"> - <environment_variable action="prepend_to" name="LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable> + <environment_variable action="prepend_to" name="LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable> <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/include</environment_variable> |