| Previous changeset 3:095162ba8e90 (2020-12-01) Next changeset 5:55daa4712413 (2022-12-07) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/feelnc commit 8913264abbcee238b5ef81268d111db98c942bfe" |
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modified:
feelnc_wrapper.xml |
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| diff -r 095162ba8e90 -r 67af24676bd6 feelnc_wrapper.xml --- a/feelnc_wrapper.xml Tue Dec 01 10:55:23 2020 +0000 +++ b/feelnc_wrapper.xml Thu Sep 23 18:18:45 2021 +0000 |
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| @@ -1,16 +1,20 @@ <?xml version="1.0" encoding="utf-8"?> <tool id="feelnc" name="FEELnc" profile="17.01" version="0.2"> <description>FlExible Extraction of LncRNA</description> + <xrefs> + <xref type="bio.tools">feelnc</xref> + </xrefs> <requirements> <requirement type="package" version="0.2">feelnc</requirement> </requirements> <command detect_errors="aggressive"><![CDATA[ export FEELNCPATH=\$(dirname \$(command -v FEELnc_pipeline.sh))/../ && - +## Symlink the genome FASTA to the working directory to avoid writing .index to inputdir +ln -s '$genome' genome_fa && FEELnc_pipeline.sh --candidate='${candidate}' --reference='${reference}' ---genome='${genome}' +--genome=genome_fa --outname='candidate_lncRNA' --outdir='out_feelnc' |