| Previous changeset 26:ce25fb581ca3 (2016-12-05) Next changeset 28:c0ecc31829bd (2016-12-07) |
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Commit message:
Uploaded |
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modified:
gene_identification.py |
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| diff -r ce25fb581ca3 -r 69baebd10e54 gene_identification.py --- a/gene_identification.py Mon Dec 05 11:00:13 2016 -0500 +++ b/gene_identification.py Wed Dec 07 05:30:33 2016 -0500 |
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| @@ -104,8 +104,10 @@ for i in range(0, len(searchstrings["cm"]) - chunklength, chunklength / 2): compiledregex["cm"].append((re.compile(searchstrings["cm"][i:i+chunklength]), False)) -for i in range(0, len(searchstrings["ce"]) - chunklength, chunklength / 2): +for i in range(0, len(searchstrings["ce"]) - chunklength + 1, chunklength / 2): compiledregex["ce"].append((re.compile(searchstrings["ce"][i:i+chunklength]), False)) + +print "ce chunks", len(compiledregex["ce"]) def removeAndReturnMaxIndex(x): #simplifies a list comprehension |