| Previous changeset 19:01bc5ce13498 (2014-02-03) Next changeset 21:e95b45f1ecbb (2014-02-03) |
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Commit message:
Uploaded |
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modified:
bamCompare.xml bamCoverage.xml bamFingerprint.xml computeGCBias.xml correctGCBias.xml |
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| diff -r 01bc5ce13498 -r 69ff16ba27bd bamCompare.xml --- a/bamCompare.xml Mon Feb 03 13:56:24 2014 -0500 +++ b/bamCompare.xml Mon Feb 03 15:47:26 2014 -0500 |
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| @@ -47,7 +47,7 @@ #end if #end if - #if str(region).strip() != '': + #if str($region).strip() != '': --region 'region' #end if |
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| diff -r 01bc5ce13498 -r 69ff16ba27bd bamCoverage.xml --- a/bamCoverage.xml Mon Feb 03 13:56:24 2014 -0500 +++ b/bamCoverage.xml Mon Feb 03 15:47:26 2014 -0500 |
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| @@ -31,7 +31,7 @@ --scaleFactor $scaling.scaleFactor #end if - #if str(region).strip() != '': + #if str($region).strip() != '': --region 'region' #end if |
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| diff -r 01bc5ce13498 -r 69ff16ba27bd bamFingerprint.xml --- a/bamFingerprint.xml Mon Feb 03 13:56:24 2014 -0500 +++ b/bamFingerprint.xml Mon Feb 03 15:47:26 2014 -0500 |
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| @@ -30,7 +30,7 @@ --plotFileFormat 'png' #end if - #if str(region).strip() != '': + #if str($region).strip() != '': --region 'region' #end if |
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| diff -r 01bc5ce13498 -r 69ff16ba27bd computeGCBias.xml --- a/computeGCBias.xml Mon Feb 03 13:56:24 2014 -0500 +++ b/computeGCBias.xml Mon Feb 03 15:47:26 2014 -0500 |
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| @@ -25,7 +25,7 @@ --effectiveGenomeSize $effectiveGenomeSize.effectiveGenomeSize_opt #end if - #if str(region).strip() != '': + #if str($region).strip() != '': --region 'region' #end if |
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| diff -r 01bc5ce13498 -r 69ff16ba27bd correctGCBias.xml --- a/correctGCBias.xml Mon Feb 03 13:56:24 2014 -0500 +++ b/correctGCBias.xml Mon Feb 03 15:47:26 2014 -0500 |
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| @@ -33,7 +33,7 @@ --effectiveGenomeSize $effectiveGenomeSize.effectiveGenomeSize_opt #end if - #if str(region).strip() != '': + #if str($region).strip() != '': --region 'region' #end if |