| Previous changeset 6:a935cbdf1c0e (2018-08-23) Next changeset 8:1d8fe9bc4cb0 (2019-05-28) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastp commit 249269561e1d3a767371c154677e5dd59147f7d7 |
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modified:
fastp.xml macros.xml |
| b |
| diff -r a935cbdf1c0e -r 6c2351178f8d fastp.xml --- a/fastp.xml Thu Aug 23 02:53:34 2018 -0400 +++ b/fastp.xml Wed Jan 16 04:02:33 2019 -0500 |
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| @@ -1,4 +1,4 @@ -<tool id="fastp" name="fastp" version="@WRAPPER_VERSION@.3"> +<tool id="fastp" name="fastp" version="@WRAPPER_VERSION@"> <description>- fast all-in-one preprocessing for FASTQ files</description> <macros> <import>macros.xml</import> @@ -72,6 +72,8 @@ #if str($single_paired.single_paired_selector).startswith('paired'): #if str($single_paired.adapter_trimming_options.adapter_sequence2): --adapter_sequence_r2 '$single_paired.adapter_trimming_options.adapter_sequence2' + #else + --detect_adapter_for_pe #end if #end if @@ -342,7 +344,7 @@ </output> </test> <!-- Ensure paired collection works --> - <test expect_num_outputs="3"> + <test expect_num_outputs="4"> <param name="single_paired_selector" value="paired_collection"/> <param name="paired_input"> <collection type="paired"> |
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| diff -r a935cbdf1c0e -r 6c2351178f8d macros.xml --- a/macros.xml Thu Aug 23 02:53:34 2018 -0400 +++ b/macros.xml Wed Jan 16 04:02:33 2019 -0500 |
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| @@ -1,5 +1,5 @@ <macros> - <token name="@WRAPPER_VERSION@">0.19.3</token> + <token name="@WRAPPER_VERSION@">0.19.5</token> <xml name="adapter_trimming_options"> <section name="adapter_trimming_options" title="Adapter Trimming Options" expanded="False"> |